RNA–Protein interactions for RNA: tA(UGC)A

TGA1, Transcript of Alanine tRNA (tRNA-Ala), predicted by tRNAscan-SE analysis, yeastyeast

Gene TGA1, Length 73 nt, Biotype tRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TGA1tA(UGC)A CLC1P17891 233 aa8.33□□□□□ -1.08
TGA1tA(UGC)A PXA2P34230 853 aa8.33□□□□□ -1.08
TGA1tA(UGC)A ADD66P36040 267 aa8.33□□□□□ -1.08
TGA1tA(UGC)A PCF11P39081 626 aaPredicted RBP8.33□□□□□ -1.08
TGA1tA(UGC)A SER33P40510 469 aa8.33□□□□□ -1.08
TGA1tA(UGC)A RPL34BP40525 121 aaKnown RBP8.33□□□□□ -1.08
TGA1tA(UGC)A MND2P40577 368 aa8.33□□□□□ -1.08
TGA1tA(UGC)A ALY2P47029 1046 aa8.33□□□□□ -1.08
TGA1tA(UGC)A AIM14P53109 570 aa8.33□□□□□ -1.08
TGA1tA(UGC)A ORC3P54790 616 aa8.33□□□□□ -1.08
TGA1tA(UGC)A EFG1Q3E705 233 aaKnown RBP8.33□□□□□ -1.08
TGA1tA(UGC)A COX5AP00424 153 aa8.32□□□□□ -1.08
TGA1tA(UGC)A SLY1P22213 666 aa8.32□□□□□ -1.08
TGA1tA(UGC)A CCR4P31384 837 aaKnown RBP8.32□□□□□ -1.08
TGA1tA(UGC)A RML2P32611 393 aa8.32□□□□□ -1.08
TGA1tA(UGC)A CSE1P33307 960 aa8.32□□□□□ -1.08
TGA1tA(UGC)A PMT1P33775 817 aa8.32□□□□□ -1.08
TGA1tA(UGC)A MMS21P38632 267 aa8.32□□□□□ -1.08
TGA1tA(UGC)A OSW7P43611 510 aa8.32□□□□□ -1.08
TGA1tA(UGC)A RSM7P47150 247 aa8.32□□□□□ -1.08
TGA1tA(UGC)A MTO1P53070 669 aa8.32□□□□□ -1.08
TGA1tA(UGC)A YGL140CP53120 1219 aa8.32□□□□□ -1.08
TGA1tA(UGC)A CLU1Q03690 1277 aaKnown RBP8.32□□□□□ -1.08
TGA1tA(UGC)A PIN2Q12057 282 aa8.32□□□□□ -1.08
TGA1tA(UGC)A MIH1P23748 554 aa8.31□□□□□ -1.08
TGA1tA(UGC)A RAD5P32849 1169 aaPredicted RBP8.31□□□□□ -1.08
TGA1tA(UGC)A EBP2P36049 427 aaKnown RBP8.31□□□□□ -1.08
TGA1tA(UGC)A BAT1P38891 393 aaKnown RBP8.31□□□□□ -1.08
TGA1tA(UGC)A ELO3P40319 345 aa8.31□□□□□ -1.08
TGA1tA(UGC)A EMC4P53073 190 aa8.31□□□□□ -1.08
TGA1tA(UGC)A STR3P53101 465 aaKnown RBP8.31□□□□□ -1.08
TGA1tA(UGC)A RIM8P53179 542 aa8.31□□□□□ -1.08
TGA1tA(UGC)A YGR127WP53275 312 aa8.31□□□□□ -1.08
TGA1tA(UGC)A YTP1P53584 459 aa8.31□□□□□ -1.08
TGA1tA(UGC)A SMA1Q02651 245 aa8.31□□□□□ -1.08
TGA1tA(UGC)A POB3Q04636 552 aaKnown RBP8.31□□□□□ -1.08
TGA1tA(UGC)A CMS1Q07897 291 aaKnown RBP8.31□□□□□ -1.08
TGA1tA(UGC)A CBC2Q08920 208 aaKnown RBP RIP-Chip data8.31□□□□□ -1.08not detected
TGA1tA(UGC)A APL5Q08951 932 aaKnown RBP8.31□□□□□ -1.08
TGA1tA(UGC)A SRX1P36077 127 aa8.3□□□□□ -1.08
TGA1tA(UGC)A DCW1P36091 449 aa8.3□□□□□ -1.08
TGA1tA(UGC)A PPX1P38698 397 aa8.3□□□□□ -1.08
TGA1tA(UGC)A OTU2P38747 307 aaKnown RBP8.3□□□□□ -1.08
TGA1tA(UGC)A YJR061WP40355 935 aa8.3□□□□□ -1.08
TGA1tA(UGC)A IST3P40565 148 aaPredicted RBP8.3□□□□□ -1.08
TGA1tA(UGC)A MKT1P40850 830 aaKnown RBP8.3□□□□□ -1.08
TGA1tA(UGC)A TRF5P48561 642 aaKnown RBP8.3□□□□□ -1.08
TGA1tA(UGC)A YML6P51998 286 aa8.3□□□□□ -1.08
TGA1tA(UGC)A MNT2P53059 558 aa8.3□□□□□ -1.08
TGA1tA(UGC)A NMA111P53920 997 aa8.3□□□□□ -1.08
TGA1tA(UGC)A AQR1P53943 586 aa8.3□□□□□ -1.08
TGA1tA(UGC)A ENT5Q03769 411 aaKnown RBP8.3□□□□□ -1.08
TGA1tA(UGC)A RPC11Q04307 110 aaPredicted RBP8.3□□□□□ -1.08
TGA1tA(UGC)A TDA9Q04545 1251 aa8.3□□□□□ -1.08
TGA1tA(UGC)A VAC14Q06708 880 aa8.3□□□□□ -1.08
TGA1tA(UGC)A FAP7Q12055 197 aaPredicted RBP8.3□□□□□ -1.08
TGA1tA(UGC)A YLL056CQ12177 298 aa8.3□□□□□ -1.08
TGA1tA(UGC)A SRB4P32569 687 aa8.29□□□□□ -1.08
TGA1tA(UGC)A DIA4P38705 446 aaPredicted RBP8.29□□□□□ -1.08
TGA1tA(UGC)A PFS1P38872 237 aa8.29□□□□□ -1.08
TGA1tA(UGC)A YAT2P40017 923 aa8.29□□□□□ -1.08
TGA1tA(UGC)A PAN6P40459 309 aa8.29□□□□□ -1.08
TGA1tA(UGC)A BUD13P46947 266 aaPredicted RBP8.29□□□□□ -1.08
TGA1tA(UGC)A SET2P46995 733 aaKnown RBP8.29□□□□□ -1.08
TGA1tA(UGC)A GLG2P47011 380 aa8.29□□□□□ -1.08
TGA1tA(UGC)A COQ5P49017 307 aa8.29□□□□□ -1.08
TGA1tA(UGC)A TEP1P53916 434 aa8.29□□□□□ -1.08
TGA1tA(UGC)A YNL035CP53962 389 aaKnown RBP8.29□□□□□ -1.08
TGA1tA(UGC)A DOS2P54858 310 aa8.29□□□□□ -1.08
TGA1tA(UGC)A MTG1Q03151 367 aaPredicted RBP8.29□□□□□ -1.08
TGA1tA(UGC)A TRE2Q08693 809 aa8.29□□□□□ -1.08
TGA1tA(UGC)A SAM4Q08985 325 aaKnown RBP8.29□□□□□ -1.08
TGA1tA(UGC)A AVL9Q12500 764 aa8.29□□□□□ -1.08
TGA1tA(UGC)A POL2P21951 2222 aaKnown RBP8.29□□□□□ -1.08
TGA1tA(UGC)A RAD3P06839 778 aa8.28□□□□□ -1.08
TGA1tA(UGC)A SST2P11972 698 aaKnown RBP8.28□□□□□ -1.08
TGA1tA(UGC)A PUF4P25339 888 aaKnown RBP RIP-Chip data8.28□□□□□ -1.08not detected
TGA1tA(UGC)A PAT1P25644 796 aaKnown RBP8.28□□□□□ -1.08
TGA1tA(UGC)A PAP1P29468 568 aaKnown RBP8.28□□□□□ -1.08
TGA1tA(UGC)A SRP101P32916 621 aa8.28□□□□□ -1.08
TGA1tA(UGC)A YHL041WP38730 149 aa8.28□□□□□ -1.08
TGA1tA(UGC)A YPR003CP53394 754 aa8.28□□□□□ -1.08
TGA1tA(UGC)A ARP9Q05123 467 aa8.28□□□□□ -1.08
TGA1tA(UGC)A NRT1Q08485 598 aa8.28□□□□□ -1.08
TGA1tA(UGC)A PGC1Q08959 321 aa8.28□□□□□ -1.08
TGA1tA(UGC)A SEY1Q99287 776 aa8.28□□□□□ -1.08
TGA1tA(UGC)A LEU1P07264 779 aaKnown RBP8.27□□□□□ -1.09
TGA1tA(UGC)A ACO1P19414 778 aaKnown RBP RIP-Chip data8.27□□□□□ -1.09not detected
TGA1tA(UGC)A MNE1P24720 663 aa8.27□□□□□ -1.09
TGA1tA(UGC)A PMI40P29952 429 aaKnown RBP8.27□□□□□ -1.09
TGA1tA(UGC)A TFB1P32776 642 aa8.27□□□□□ -1.09
TGA1tA(UGC)A LIP5P32875 414 aa8.27□□□□□ -1.09
TGA1tA(UGC)A IRS4P36115 615 aaKnown RBP8.27□□□□□ -1.09
TGA1tA(UGC)A UTH1P36135 365 aa8.27□□□□□ -1.09
TGA1tA(UGC)A TGL4P36165 910 aa8.27□□□□□ -1.09
TGA1tA(UGC)A ECM2P38241 364 aaKnown RBP8.27□□□□□ -1.09
TGA1tA(UGC)A RAD26P40352 1085 aa8.27□□□□□ -1.09
TGA1tA(UGC)A HLJ1P48353 224 aa8.27□□□□□ -1.09
TGA1tA(UGC)A APT1P49435 187 aaKnown RBP8.27□□□□□ -1.09
TGA1tA(UGC)A MET14Q02196 202 aa8.27□□□□□ -1.09
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms