RNA–Protein interactions for RNA: YPR173C

VPS4, Transcript of AAA-ATPase involved in multivesicular body (MVB) protein sorting, yeastyeast

Gene VPS4, Length 1,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS4YPR173C SLT2Q00772 484 aa6.13□□□□□ -1.43
VPS4YPR173C YDR476CQ03362 224 aa6.13□□□□□ -1.43
VPS4YPR173C YDR179W-AQ03983 463 aa6.13□□□□□ -1.43
VPS4YPR173C BUD22Q04347 519 aaKnown RBP6.13□□□□□ -1.43
VPS4YPR173C KAP95Q06142 861 aaKnown RBP6.13□□□□□ -1.43
VPS4YPR173C NDL1Q06568 189 aa6.13□□□□□ -1.43
VPS4YPR173C IWR1Q07532 353 aaPredicted RBP6.13□□□□□ -1.43
VPS4YPR173C DIA2Q08496 732 aaPredicted RBP6.13□□□□□ -1.43
VPS4YPR173C BI3Q9ZZW7 517 aa6.13□□□□□ -1.43
VPS4YPR173C SBP1P10080 294 aaKnown RBP6.12□□□□□ -1.43
VPS4YPR173C MSD1P15179 658 aaKnown RBP6.12□□□□□ -1.43
VPS4YPR173C SNT1P25357 1226 aa6.12□□□□□ -1.43
VPS4YPR173C ICL1P28240 557 aaPredicted RBP6.12□□□□□ -1.43
VPS4YPR173C TFC1P32367 649 aa6.12□□□□□ -1.43
VPS4YPR173C TMT1P32643 299 aa6.12□□□□□ -1.43
VPS4YPR173C COT1P32798 439 aa6.12□□□□□ -1.43
VPS4YPR173C PEX2P32800 271 aa6.12□□□□□ -1.43
VPS4YPR173C KES1P35844 434 aaKnown RBP6.12□□□□□ -1.43
VPS4YPR173C FES1P38260 290 aa6.12□□□□□ -1.43
VPS4YPR173C DIA4P38705 446 aaPredicted RBP6.12□□□□□ -1.43
VPS4YPR173C NPP2P39997 493 aa6.12□□□□□ -1.43
VPS4YPR173C LAM5P43560 674 aa6.12□□□□□ -1.43
VPS4YPR173C FAR3P46671 204 aa6.12□□□□□ -1.43
VPS4YPR173C YJR107WP47145 328 aa6.12□□□□□ -1.43
VPS4YPR173C RBL2P48606 106 aaKnown RBP6.12□□□□□ -1.43
VPS4YPR173C HSH155P49955 971 aaKnown RBP6.12□□□□□ -1.43
VPS4YPR173C RTA1P53047 317 aa6.12□□□□□ -1.43
VPS4YPR173C YGL108CP53139 140 aa6.12□□□□□ -1.43
VPS4YPR173C RCF2P53721 224 aa6.12□□□□□ -1.43
VPS4YPR173C YKR005CQ02203 525 aa6.12□□□□□ -1.43
VPS4YPR173C TY1A-DR2Q03964 440 aaKnown RBP6.12□□□□□ -1.43
VPS4YPR173C SXM1Q04175 944 aaKnown RBP6.12□□□□□ -1.43
VPS4YPR173C CHS5Q12114 671 aaKnown RBP6.12□□□□□ -1.43
VPS4YPR173C HRT3Q12347 344 aa6.12□□□□□ -1.43
VPS4YPR173C AVL9Q12500 764 aa6.12□□□□□ -1.43
VPS4YPR173C ATG11Q12527 1178 aa6.12□□□□□ -1.43
VPS4YPR173C AI5_BETAQ9ZZX0 354 aa6.12□□□□□ -1.43
VPS4YPR173C PHR1P05066 565 aaKnown RBP RIP-Chip data6.11□□□□□ -1.43not detected
VPS4YPR173C MPH2P0CD99 609 aa6.11□□□□□ -1.43
VPS4YPR173C IMA3P0CW40 589 aa6.11□□□□□ -1.43
VPS4YPR173C IMA4P0CW41 589 aa6.11□□□□□ -1.43
VPS4YPR173C ATR1P13090 542 aa6.11□□□□□ -1.43
VPS4YPR173C CDC42P19073 191 aa6.11□□□□□ -1.43
VPS4YPR173C TRX1P22217 103 aaKnown RBP6.11□□□□□ -1.43
VPS4YPR173C SSD1P24276 1250 aaKnown RBP RIP-Chip data6.11□□□□□ -1.43not detected
VPS4YPR173C RIB7P33312 244 aa6.11□□□□□ -1.43
VPS4YPR173C CTP1P38152 299 aa6.11□□□□□ -1.43
VPS4YPR173C PCM1P38628 557 aaKnown RBP6.11□□□□□ -1.43
VPS4YPR173C SIT1P39980 628 aa6.11□□□□□ -1.43
VPS4YPR173C MKT1P40850 830 aaKnown RBP6.11□□□□□ -1.43
VPS4YPR173C SBE2P42223 864 aaKnown RBP6.11□□□□□ -1.43
VPS4YPR173C ARC1P46672 376 aaKnown RBP6.11□□□□□ -1.43
VPS4YPR173C MAD3P47074 515 aa6.11□□□□□ -1.43
VPS4YPR173C NUP84P52891 726 aa6.11□□□□□ -1.43
VPS4YPR173C PPT1P53043 513 aa6.11□□□□□ -1.43
VPS4YPR173C PUS2P53167 370 aa6.11□□□□□ -1.43
VPS4YPR173C YGR125WP53273 1036 aa6.11□□□□□ -1.43
VPS4YPR173C DSL1P53847 754 aa6.11□□□□□ -1.43
VPS4YPR173C SFB2P53953 876 aa6.11□□□□□ -1.43
VPS4YPR173C DUS4Q06063 367 aa6.11□□□□□ -1.43
VPS4YPR173C IMA2Q08295 589 aa6.11□□□□□ -1.43
VPS4YPR173C SGT2Q12118 346 aaKnown RBP6.11□□□□□ -1.43
VPS4YPR173C GIS3Q12418 502 aa6.11□□□□□ -1.43
VPS4YPR173C FLP1P03870 423 aa6.1□□□□□ -1.43
VPS4YPR173C PMA1P05030 918 aaKnown RBP6.1□□□□□ -1.43
VPS4YPR173C YER152CP10356 443 aa6.1□□□□□ -1.43
VPS4YPR173C PRP6P19735 899 aaPredicted RBP6.1□□□□□ -1.43
VPS4YPR173C SLY1P22213 666 aa6.1□□□□□ -1.43
VPS4YPR173C CNA1P23287 553 aa6.1□□□□□ -1.43
VPS4YPR173C CLB2P24869 491 aa6.1□□□□□ -1.43
VPS4YPR173C MEF1P25039 761 aa6.1□□□□□ -1.43
VPS4YPR173C SPR1P32603 445 aa6.1□□□□□ -1.43
VPS4YPR173C GYP6P32806 458 aa6.1□□□□□ -1.43
VPS4YPR173C DBP7P36120 742 aaKnown RBP6.1□□□□□ -1.43
VPS4YPR173C RIM2P38127 377 aa6.1□□□□□ -1.43
VPS4YPR173C SLM4P38247 162 aa6.1□□□□□ -1.43
VPS4YPR173C EXO84P38261 753 aa6.1□□□□□ -1.43
VPS4YPR173C ERC1P38767 581 aa6.1□□□□□ -1.43
VPS4YPR173C SAH1P39954 449 aaKnown RBP6.1□□□□□ -1.43
VPS4YPR173C SCC4P40090 624 aa6.1□□□□□ -1.43
VPS4YPR173C STB1P42845 420 aa6.1□□□□□ -1.43
VPS4YPR173C SHE4P51534 789 aa6.1□□□□□ -1.43
VPS4YPR173C YGR054WP53235 642 aaKnown RBP6.1□□□□□ -1.43
VPS4YPR173C COG2P53271 262 aa6.1□□□□□ -1.43
VPS4YPR173C SQS1P53866 767 aaKnown RBP6.1□□□□□ -1.43
VPS4YPR173C SRL4Q03085 281 aa6.1□□□□□ -1.43
VPS4YPR173C CEF1Q03654 590 aaPredicted RBP6.1□□□□□ -1.43
VPS4YPR173C TVP15Q03860 143 aa6.1□□□□□ -1.43
VPS4YPR173C CRD1Q07560 283 aa6.1□□□□□ -1.43
VPS4YPR173C SMC5Q08204 1093 aa6.1□□□□□ -1.43
VPS4YPR173C ADF1Q2V2Q1 113 aa6.1□□□□□ -1.43
VPS4YPR173C TY1B-AO13527 1196 aaKnown RBP6.09□□□□□ -1.43
VPS4YPR173C ATP2P00830 511 aaKnown RBP6.09□□□□□ -1.43
VPS4YPR173C SUI3P09064 285 aaKnown RBP6.09□□□□□ -1.43
VPS4YPR173C GPA2P10823 449 aa6.09□□□□□ -1.43
VPS4YPR173C COX11P19516 300 aaKnown RBP6.09□□□□□ -1.43
VPS4YPR173C ADY2P25613 283 aa6.09□□□□□ -1.43
VPS4YPR173C CDC20P26309 610 aa6.09□□□□□ -1.43
VPS4YPR173C YSC84P32793 468 aa6.09□□□□□ -1.43
VPS4YPR173C BCS1P32839 456 aa6.09□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms