RNA–Protein interactions for RNA: YPL174C

NIP100, Transcript of Large subunit of the dynactin complex, yeastyeast

Gene NIP100, Length 2,607 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIP100YPL174C GSM1P42950 618 aa1.91□□□□□ -2.1
NIP100YPL174C PUF2Q12221 1075 aaKnown RBP RIP-Chip data1.91□□□□□ -2.1not detected
NIP100YPL174C VAS1P07806 1104 aaKnown RBP1.91□□□□□ -2.1
NIP100YPL174C YMR085WP0CF18 432 aa1.91□□□□□ -2.1
NIP100YPL174C HEM12P32347 362 aaPredicted RBP1.91□□□□□ -2.1
NIP100YPL174C ECM22Q05958 814 aaPredicted RBP1.91□□□□□ -2.1
NIP100YPL174C DBP10Q12389 995 aaKnown RBP1.91□□□□□ -2.1
NIP100YPL174C PDE1P22434 369 aa1.9□□□□□ -2.1
NIP100YPL174C RRP43P25359 394 aaPredicted RBP1.9□□□□□ -2.1
NIP100YPL174C DOS2P54858 310 aa1.9□□□□□ -2.1
NIP100YPL174C YML119WQ03208 357 aa1.9□□□□□ -2.1
NIP100YPL174C USA1Q03714 838 aa1.9□□□□□ -2.1
NIP100YPL174C SNA4Q07549 140 aa1.9□□□□□ -2.1
NIP100YPL174C MRN1Q08925 612 aaKnown RBP RIP-Chip data1.9□□□□□ -2.1not detected
NIP100YPL174C YPR089WO13585 888 aa1.9□□□□□ -2.11
NIP100YPL174C SUI3P09064 285 aaKnown RBP1.9□□□□□ -2.11
NIP100YPL174C SAE2P46946 345 aa1.9□□□□□ -2.11
NIP100YPL174C ASK10P48361 1146 aa1.9□□□□□ -2.11
NIP100YPL174C YNR071CP53757 342 aa1.9□□□□□ -2.11
NIP100YPL174C YPL108WQ02872 168 aaPredicted RBP1.9□□□□□ -2.11
NIP100YPL174C SPN1Q06505 410 aaPredicted RBP1.9□□□□□ -2.11
NIP100YPL174C PRE2P30656 287 aaKnown RBP1.89□□□□□ -2.11
NIP100YPL174C VRG4P40107 337 aa1.89□□□□□ -2.11
NIP100YPL174C TDA10P42938 290 aa1.89□□□□□ -2.11
NIP100YPL174C MDV1P47025 714 aa1.89□□□□□ -2.11
NIP100YPL174C COS12P53053 380 aa1.89□□□□□ -2.11
NIP100YPL174C COP1P53622 1201 aaKnown RBP1.89□□□□□ -2.11
NIP100YPL174C TRS31Q03337 283 aa1.89□□□□□ -2.11
NIP100YPL174C ARA2Q04212 335 aa1.89□□□□□ -2.11
NIP100YPL174C RAD33Q04231 177 aa1.89□□□□□ -2.11
NIP100YPL174C HRD3Q05787 833 aa1.89□□□□□ -2.11
NIP100YPL174C RTK1Q12100 620 aaPredicted RBP1.89□□□□□ -2.11
NIP100YPL174C SSB1P11484 613 aaKnown RBP1.89□□□□□ -2.11
NIP100YPL174C MGM1P32266 881 aa1.89□□□□□ -2.11
NIP100YPL174C GRX4P32642 244 aa1.89□□□□□ -2.11
NIP100YPL174C YPT10P38146 199 aa1.89□□□□□ -2.11
NIP100YPL174C SSB2P40150 613 aaKnown RBP1.89□□□□□ -2.11
NIP100YPL174C FOL1P53848 824 aa1.89□□□□□ -2.11
NIP100YPL174C BOP3P53958 396 aa1.89□□□□□ -2.11
NIP100YPL174C COG6P53959 839 aa1.89□□□□□ -2.11
NIP100YPL174C GEP3Q08622 556 aa1.89□□□□□ -2.11
NIP100YPL174C YLR111WQ12528 110 aa1.89□□□□□ -2.11
NIP100YPL174C ASK1P35734 292 aa1.88□□□□□ -2.11
NIP100YPL174C GRX7P38068 203 aa1.88□□□□□ -2.11
NIP100YPL174C VPS27P40343 622 aaKnown RBP1.88□□□□□ -2.11
NIP100YPL174C CAB2P40506 365 aa1.88□□□□□ -2.11
NIP100YPL174C SAD1P43589 448 aa1.88□□□□□ -2.11
NIP100YPL174C STB2P46679 850 aa1.88□□□□□ -2.11
NIP100YPL174C ORC5P50874 479 aa1.88□□□□□ -2.11
NIP100YPL174C LSC1P53598 329 aaKnown RBP1.88□□□□□ -2.11
NIP100YPL174C ACS1Q01574 713 aa1.88□□□□□ -2.11
NIP100YPL174C ATG21Q02887 496 aa1.88□□□□□ -2.11
NIP100YPL174C PFA4Q12006 378 aa1.88□□□□□ -2.11
NIP100YPL174C CHO2P05374 869 aaKnown RBP1.88□□□□□ -2.11
NIP100YPL174C MRC1P25588 1096 aa1.88□□□□□ -2.11
NIP100YPL174C ARO9P38840 513 aaPredicted RBP1.88□□□□□ -2.11
NIP100YPL174C IRC8P47046 822 aa1.88□□□□□ -2.11
NIP100YPL174C VPS25P47142 202 aa1.88□□□□□ -2.11
NIP100YPL174C TRI1Q05024 226 aa1.88□□□□□ -2.11
NIP100YPL174C HIM1Q06674 414 aa1.88□□□□□ -2.11
NIP100YPL174C SLX4Q12098 748 aa1.88□□□□□ -2.11
NIP100YPL174C PRP45P28004 379 aaPredicted RBP1.87□□□□□ -2.11
NIP100YPL174C YJU2P28320 278 aaPredicted RBP1.87□□□□□ -2.11
NIP100YPL174C BST1P43571 1029 aa1.87□□□□□ -2.11
NIP100YPL174C THI3Q07471 609 aa1.87□□□□□ -2.11
NIP100YPL174C DSE3Q08729 430 aa1.87□□□□□ -2.11
NIP100YPL174C LCB4Q12246 624 aa1.87□□□□□ -2.11
NIP100YPL174C RRI1Q12468 440 aa1.87□□□□□ -2.11
NIP100YPL174C AMD2P22580 549 aa1.87□□□□□ -2.11
NIP100YPL174C YCR061WP25639 631 aa1.87□□□□□ -2.11
NIP100YPL174C YPT11P48559 417 aa1.87□□□□□ -2.11
NIP100YPL174C ESF2P53743 316 aaKnown RBP1.87□□□□□ -2.11
NIP100YPL174C YDR109CQ04585 715 aa1.87□□□□□ -2.11
NIP100YPL174C CRD1Q07560 283 aa1.87□□□□□ -2.11
NIP100YPL174C YLR049CQ12110 428 aa1.87□□□□□ -2.11
NIP100YPL174C SEC18P18759 758 aaKnown RBP1.87□□□□□ -2.11
NIP100YPL174C LAC1P28496 418 aa1.87□□□□□ -2.11
NIP100YPL174C ECM32P32644 1121 aaKnown RBP1.87□□□□□ -2.11
NIP100YPL174C NIC96P34077 839 aa1.87□□□□□ -2.11
NIP100YPL174C VBA2P38358 474 aaKnown RBP1.87□□□□□ -2.11
NIP100YPL174C SWD1P39706 426 aa1.87□□□□□ -2.11
NIP100YPL174C ARB1P40024 610 aaKnown RBP1.87□□□□□ -2.11
NIP100YPL174C CFD1P40558 293 aa1.87□□□□□ -2.11
NIP100YPL174C MAD2P40958 196 aa1.87□□□□□ -2.11
NIP100YPL174C YDL242WQ07746 117 aa1.87□□□□□ -2.11
NIP100YPL174C BUD7Q08754 746 aa1.87□□□□□ -2.11
NIP100YPL174C NYV1Q12255 253 aa1.87□□□□□ -2.11
NIP100YPL174C RVB2Q12464 471 aaKnown RBP1.87□□□□□ -2.11
NIP100YPL174C TMA7Q3E764 64 aaKnown RBP1.87□□□□□ -2.11
NIP100YPL174C ADH4P10127 382 aa1.86□□□□□ -2.11
NIP100YPL174C YEF3P16521 1044 aaKnown RBP1.86□□□□□ -2.11
NIP100YPL174C YKL133CP36066 463 aa1.86□□□□□ -2.11
NIP100YPL174C MEP2P41948 499 aa1.86□□□□□ -2.11
NIP100YPL174C ZAP1P47043 880 aa1.86□□□□□ -2.11
NIP100YPL174C YGR079WP53249 370 aa1.86□□□□□ -2.11
NIP100YPL174C YNL092WP53934 400 aa1.86□□□□□ -2.11
NIP100YPL174C PDR8Q06149 701 aa1.86□□□□□ -2.11
NIP100YPL174C NEW1Q08972 1196 aaKnown RBP1.86□□□□□ -2.11
NIP100YPL174C DIN7Q12086 430 aa1.86□□□□□ -2.11
NIP100YPL174C MPD2Q99316 277 aa1.86□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 9.6 ms