RNA–Protein interactions for RNA: YPL047W

SGF11, Transcript of Integral subunit of SAGA histone acetyltransferase complex, yeastyeast

Gene SGF11, Length 300 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGF11YPL047W LYS21Q12122 440 aaKnown RBP1.74□□□□□ -2.13
SGF11YPL047W YER175W-AQ8TGU4 54 aa1.74□□□□□ -2.13
SGF11YPL047W YOX1P34161 385 aa1.73□□□□□ -2.13
SGF11YPL047W TYS1P36421 394 aaKnown RBP1.73□□□□□ -2.13
SGF11YPL047W RKM3P38222 552 aa1.73□□□□□ -2.13
SGF11YPL047W LNP1P38878 278 aa1.73□□□□□ -2.13
SGF11YPL047W SAP1P39955 897 aaKnown RBP1.73□□□□□ -2.13
SGF11YPL047W MNN11P46985 422 aaKnown RBP1.73□□□□□ -2.13
SGF11YPL047W HLJ1P48353 224 aa1.73□□□□□ -2.13
SGF11YPL047W ORC5P50874 479 aa1.73□□□□□ -2.13
SGF11YPL047W HOS2P53096 452 aaPredicted RBP1.73□□□□□ -2.13
SGF11YPL047W DIG1Q03063 452 aaKnown RBP1.73□□□□□ -2.13
SGF11YPL047W YML119WQ03208 357 aa1.73□□□□□ -2.13
SGF11YPL047W YLR281CQ05863 155 aa1.73□□□□□ -2.13
SGF11YPL047W GSH2Q08220 491 aa1.73□□□□□ -2.13
SGF11YPL047W YTM1Q12024 460 aaPredicted RBP1.73□□□□□ -2.13
SGF11YPL047W NOP14Q99207 810 aaKnown RBP1.73□□□□□ -2.13
SGF11YPL047W YFL068WP0CX99 160 aa1.72□□□□□ -2.13
SGF11YPL047W YLL066W-AP0CY00 160 aa1.72□□□□□ -2.13
SGF11YPL047W YLL067W-AP0CY01 160 aa1.72□□□□□ -2.13
SGF11YPL047W AMD2P22580 549 aa1.72□□□□□ -2.13
SGF11YPL047W HXT4P32467 576 aa1.72□□□□□ -2.13
SGF11YPL047W NIC96P34077 839 aa1.72□□□□□ -2.13
SGF11YPL047W PEA2P40091 420 aa1.72□□□□□ -2.13
SGF11YPL047W YJL107CP42947 387 aa1.72□□□□□ -2.13
SGF11YPL047W RNR4P49723 345 aaKnown RBP1.72□□□□□ -2.13
SGF11YPL047W BET4Q00618 327 aa1.72□□□□□ -2.13
SGF11YPL047W MTQ2Q03920 221 aaPredicted RBP1.72□□□□□ -2.13
SGF11YPL047W ARA2Q04212 335 aa1.72□□□□□ -2.13
SGF11YPL047W RAD34Q06665 692 aa1.72□□□□□ -2.13
SGF11YPL047W NGL1Q08213 363 aaKnown RBP1.72□□□□□ -2.13
SGF11YPL047W LCB4Q12246 624 aa1.72□□□□□ -2.13
SGF11YPL047W YMR230W-AQ3E7B5 62 aa1.72□□□□□ -2.13
SGF11YPL047W RPL42AP0CX27 106 aaKnown RBP1.71□□□□□ -2.14
SGF11YPL047W RPL42BP0CX28 106 aaKnown RBP1.71□□□□□ -2.14
SGF11YPL047W CWH43P25618 953 aa1.71□□□□□ -2.14
SGF11YPL047W MSS51P32335 436 aa1.71□□□□□ -2.14
SGF11YPL047W DHH1P39517 506 aaKnown RBP1.71□□□□□ -2.14
SGF11YPL047W ERV46P39727 415 aa1.71□□□□□ -2.14
SGF11YPL047W YAT1P80235 687 aa1.71□□□□□ -2.14
SGF11YPL047W YML053CQ04978 212 aa1.71□□□□□ -2.14
SGF11YPL047W FPR4Q06205 392 aaPredicted RBP1.71□□□□□ -2.14
SGF11YPL047W THI73Q07904 523 aa1.71□□□□□ -2.14
SGF11YPL047W GPN2Q08726 347 aaPredicted RBP1.71□□□□□ -2.14
SGF11YPL047W TIP41Q12199 356 aa1.71□□□□□ -2.14
SGF11YPL047W NOP56Q12460 504 aaKnown RBP RIP-Chip data1.71□□□□□ -2.14not detected
SGF11YPL047W ILV2P07342 687 aaKnown RBP1.7□□□□□ -2.14
SGF11YPL047W SRP68P38687 599 aaKnown RBP1.7□□□□□ -2.14
SGF11YPL047W ARN1P38731 627 aa1.7□□□□□ -2.14
SGF11YPL047W BZZ1P38822 633 aa1.7□□□□□ -2.14
SGF11YPL047W VPS25P47142 202 aa1.7□□□□□ -2.14
SGF11YPL047W COS12P53053 380 aa1.7□□□□□ -2.14
SGF11YPL047W ECM16Q04217 1267 aaKnown RBP1.7□□□□□ -2.14
SGF11YPL047W FMP42Q04991 504 aa1.7□□□□□ -2.14
SGF11YPL047W YDL242WQ07746 117 aa1.7□□□□□ -2.14
SGF11YPL047W VPS5Q92331 675 aa1.7□□□□□ -2.14
SGF11YPL047W ADR1P07248 1323 aa1.69□□□□□ -2.14
SGF11YPL047W PRP16P15938 1071 aaPredicted RBP1.69□□□□□ -2.14
SGF11YPL047W YND1P40009 630 aa1.69□□□□□ -2.14
SGF11YPL047W QRI7P43122 407 aa1.69□□□□□ -2.14
SGF11YPL047W IDS2P46958 469 aa1.69□□□□□ -2.14
SGF11YPL047W FCP1Q03254 732 aa1.69□□□□□ -2.14
SGF11YPL047W HOS1Q12214 470 aa1.69□□□□□ -2.14
SGF11YPL047W Q0010Q9ZZX9 128 aa1.69□□□□□ -2.14
SGF11YPL047W SES1P07284 462 aaKnown RBP1.68□□□□□ -2.14
SGF11YPL047W KGD2P19262 463 aaPredicted RBP1.68□□□□□ -2.14
SGF11YPL047W ATP12P22135 325 aa1.68□□□□□ -2.14
SGF11YPL047W ARG1P22768 420 aa1.68□□□□□ -2.14
SGF11YPL047W PTC6P25646 442 aa1.68□□□□□ -2.14
SGF11YPL047W GSH1P32477 678 aa1.68□□□□□ -2.14
SGF11YPL047W VBA2P38358 474 aaKnown RBP1.68□□□□□ -2.14
SGF11YPL047W STB5P38699 743 aa1.68□□□□□ -2.14
SGF11YPL047W VPS8P39702 1274 aa1.68□□□□□ -2.14
SGF11YPL047W PCL6P40038 420 aa1.68□□□□□ -2.14
SGF11YPL047W CRZ1P53968 678 aa1.68□□□□□ -2.14
SGF11YPL047W ACS1Q01574 713 aa1.68□□□□□ -2.14
SGF11YPL047W SMA2Q04658 369 aa1.68□□□□□ -2.14
SGF11YPL047W YPL191CQ08930 360 aa1.68□□□□□ -2.14
SGF11YPL047W TAH18Q12181 623 aa1.68□□□□□ -2.14
SGF11YPL047W NUP145P49687 1317 aa1.67□□□□□ -2.14
SGF11YPL047W PPG1P32838 368 aa1.67□□□□□ -2.14
SGF11YPL047W RRP14P36080 434 aaKnown RBP1.67□□□□□ -2.14
SGF11YPL047W RPF2P36160 344 aaKnown RBP1.67□□□□□ -2.14
SGF11YPL047W IRC5P43610 853 aa1.67□□□□□ -2.14
SGF11YPL047W PMT3P47190 753 aa1.67□□□□□ -2.14
SGF11YPL047W MNT2P53059 558 aa1.67□□□□□ -2.14
SGF11YPL047W RNH70P53331 553 aa1.67□□□□□ -2.14
SGF11YPL047W DNM1P54861 757 aa1.67□□□□□ -2.14
SGF11YPL047W UME1Q03010 460 aa1.67□□□□□ -2.14
SGF11YPL047W SND1Q04007 877 aa1.67□□□□□ -2.14
SGF11YPL047W PDR8Q06149 701 aa1.67□□□□□ -2.14
SGF11YPL047W THI3Q07471 609 aa1.67□□□□□ -2.14
SGF11YPL047W YOR378WQ08902 515 aa1.67□□□□□ -2.14
SGF11YPL047W YPR027CQ12079 277 aa1.67□□□□□ -2.14
SGF11YPL047W SWC3P31376 625 aa1.66□□□□□ -2.14
SGF11YPL047W SIP1P32578 815 aa1.66□□□□□ -2.14
SGF11YPL047W OCT1P35999 772 aa1.66□□□□□ -2.14
SGF11YPL047W MNN2P38069 597 aa1.66□□□□□ -2.14
SGF11YPL047W ARO9P38840 513 aaPredicted RBP1.66□□□□□ -2.14
SGF11YPL047W ROK1P45818 564 aaPredicted RBP1.66□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 18.1 ms