RNA–Protein interactions for RNA: YPL004C

LSP1, Transcript of Eisosome core component, yeastyeast

Gene LSP1, Length 1,026 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSP1YPL004C AMA1P50082 593 aa8.2□□□□□ -1.1
LSP1YPL004C NMA2P53204 395 aa8.2□□□□□ -1.1
LSP1YPL004C YTP1P53584 459 aa8.2□□□□□ -1.1
LSP1YPL004C TDA7P53882 636 aaPredicted RBP8.2□□□□□ -1.1
LSP1YPL004C RPL34AP87262 121 aaPredicted RBP8.2□□□□□ -1.1
LSP1YPL004C ESC2Q06340 456 aa8.2□□□□□ -1.1
LSP1YPL004C NRT1Q08485 598 aa8.2□□□□□ -1.1
LSP1YPL004C CBC2Q08920 208 aaKnown RBP RIP-Chip data8.2□□□□□ -1.1not detected
LSP1YPL004C FAP7Q12055 197 aaPredicted RBP8.2□□□□□ -1.1
LSP1YPL004C PER33Q12144 273 aa8.2□□□□□ -1.1
LSP1YPL004C YLL056CQ12177 298 aa8.2□□□□□ -1.1
LSP1YPL004C PEX11Q12462 236 aa8.2□□□□□ -1.1
LSP1YPL004C AVL9Q12500 764 aa8.2□□□□□ -1.1
LSP1YPL004C DAL81P21657 970 aa8.19□□□□□ -1.1
LSP1YPL004C AAT2P23542 418 aaKnown RBP8.19□□□□□ -1.1
LSP1YPL004C MIH1P23748 554 aa8.19□□□□□ -1.1
LSP1YPL004C GEX1P25596 615 aa8.19□□□□□ -1.1
LSP1YPL004C YEL043WP32618 956 aa8.19□□□□□ -1.1
LSP1YPL004C GEX2P36173 615 aa8.19□□□□□ -1.1
LSP1YPL004C OTU2P38747 307 aaKnown RBP8.19□□□□□ -1.1
LSP1YPL004C FAA4P47912 694 aaKnown RBP8.19□□□□□ -1.1
LSP1YPL004C ASN2P49090 572 aaKnown RBP8.19□□□□□ -1.1
LSP1YPL004C DOS2P54858 310 aa8.19□□□□□ -1.1
LSP1YPL004C ENT5Q03769 411 aaKnown RBP8.19□□□□□ -1.1
LSP1YPL004C URH1Q04179 340 aa8.19□□□□□ -1.1
LSP1YPL004C VTI1Q04338 217 aa8.19□□□□□ -1.1
LSP1YPL004C AAD15Q08361 143 aa8.19□□□□□ -1.1
LSP1YPL004C AI5_ALPHAQ9ZZX1 630 aa8.19□□□□□ -1.1
LSP1YPL004C MRPL8P22353 238 aa8.18□□□□□ -1.1
LSP1YPL004C PUF4P25339 888 aaKnown RBP RIP-Chip data8.18□□□□□ -1.1not detected
LSP1YPL004C DPB3P27344 201 aa8.18□□□□□ -1.1
LSP1YPL004C YJU3P28321 313 aa8.18□□□□□ -1.1
LSP1YPL004C CSE1P33307 960 aa8.18□□□□□ -1.1
LSP1YPL004C ECM2P38241 364 aaKnown RBP8.18□□□□□ -1.1
LSP1YPL004C REI1P38344 393 aaPredicted RBP8.18□□□□□ -1.1
LSP1YPL004C MSG5P38590 489 aa8.18□□□□□ -1.1
LSP1YPL004C YHL041WP38730 149 aa8.18□□□□□ -1.1
LSP1YPL004C YAT2P40017 923 aa8.18□□□□□ -1.1
LSP1YPL004C ELO3P40319 345 aa8.18□□□□□ -1.1
LSP1YPL004C AIM14P53109 570 aa8.18□□□□□ -1.1
LSP1YPL004C MAL13P53338 473 aa8.18□□□□□ -1.1
LSP1YPL004C IPI3P53877 555 aa8.18□□□□□ -1.1
LSP1YPL004C NMA111P53920 997 aa8.18□□□□□ -1.1
LSP1YPL004C RPL22BP56628 122 aaKnown RBP8.18□□□□□ -1.1
LSP1YPL004C RSB1Q08417 382 aa8.18□□□□□ -1.1
LSP1YPL004C OCA6Q12454 224 aa8.18□□□□□ -1.1
LSP1YPL004C SEN1Q00416 2231 aaKnown RBP8.17□□□□□ -1.1
LSP1YPL004C COX5AP00424 153 aa8.17□□□□□ -1.1
LSP1YPL004C PET111P08468 800 aa8.17□□□□□ -1.1
LSP1YPL004C GCD6P32501 712 aaKnown RBP8.17□□□□□ -1.1
LSP1YPL004C BYE1P36106 594 aa8.17□□□□□ -1.1
LSP1YPL004C CKB2P38930 258 aa8.17□□□□□ -1.1
LSP1YPL004C RGD2P43556 714 aa8.17□□□□□ -1.1
LSP1YPL004C ROK1P45818 564 aaPredicted RBP8.17□□□□□ -1.1
LSP1YPL004C NUP84P52891 726 aa8.17□□□□□ -1.1
LSP1YPL004C YPR003CP53394 754 aa8.17□□□□□ -1.1
LSP1YPL004C ORC3P54790 616 aa8.17□□□□□ -1.1
LSP1YPL004C PIR1Q03178 341 aa8.17□□□□□ -1.1
LSP1YPL004C ARP9Q05123 467 aa8.17□□□□□ -1.1
LSP1YPL004C LCB5Q06147 687 aaKnown RBP8.17□□□□□ -1.1
LSP1YPL004C PGC1Q08959 321 aa8.17□□□□□ -1.1
LSP1YPL004C CDC24P11433 854 aaPredicted RBP8.16□□□□□ -1.1
LSP1YPL004C SST2P11972 698 aaKnown RBP8.16□□□□□ -1.1
LSP1YPL004C PYC2P32327 1180 aaKnown RBP8.16□□□□□ -1.1
LSP1YPL004C LIP5P32875 414 aa8.16□□□□□ -1.1
LSP1YPL004C CCT4P39078 528 aaKnown RBP8.16□□□□□ -1.1
LSP1YPL004C GDH3P39708 457 aa8.16□□□□□ -1.1
LSP1YPL004C IST3P40565 148 aaPredicted RBP8.16□□□□□ -1.1
LSP1YPL004C IML2P47031 731 aa8.16□□□□□ -1.1
LSP1YPL004C PRM1P53835 661 aa8.16□□□□□ -1.1
LSP1YPL004C CAF120P53836 1060 aa8.16□□□□□ -1.1
LSP1YPL004C PEX13P80667 386 aa8.16□□□□□ -1.1
LSP1YPL004C MET14Q02196 202 aa8.16□□□□□ -1.1
LSP1YPL004C MSH6Q03834 1242 aa8.16□□□□□ -1.1
LSP1YPL004C HPF1Q05164 967 aa8.16□□□□□ -1.1
LSP1YPL004C TRE2Q08693 809 aa8.16□□□□□ -1.1
LSP1YPL004C RMP1Q12530 201 aa8.16□□□□□ -1.1
LSP1YPL004C YML002WP0CF17 737 aa8.15□□□□□ -1.1
LSP1YPL004C TSR4P25040 408 aa8.15□□□□□ -1.1
LSP1YPL004C MSH2P25847 964 aa8.15□□□□□ -1.1
LSP1YPL004C PMI40P29952 429 aaKnown RBP8.15□□□□□ -1.1
LSP1YPL004C GUT1P32190 709 aa8.15□□□□□ -1.1
LSP1YPL004C UTR2P32623 467 aa8.15□□□□□ -1.1
LSP1YPL004C MRS6P32864 603 aaKnown RBP8.15□□□□□ -1.1
LSP1YPL004C SRP101P32916 621 aa8.15□□□□□ -1.1
LSP1YPL004C CNS1P33313 385 aa8.15□□□□□ -1.1
LSP1YPL004C PBP2P38151 413 aaKnown RBP RIP-Chip data8.15□□□□□ -1.1not detected
LSP1YPL004C VHC1P38329 1120 aa8.15□□□□□ -1.1
LSP1YPL004C POP4P38336 279 aa8.15□□□□□ -1.1
LSP1YPL004C PIK1P39104 1066 aa8.15□□□□□ -1.1
LSP1YPL004C BUD13P46947 266 aaPredicted RBP8.15□□□□□ -1.1
LSP1YPL004C NMD5P46970 1048 aa8.15□□□□□ -1.1
LSP1YPL004C TRF5P48561 642 aaKnown RBP8.15□□□□□ -1.1
LSP1YPL004C STR3P53101 465 aaKnown RBP8.15□□□□□ -1.1
LSP1YPL004C GND2P53319 492 aa8.15□□□□□ -1.1
LSP1YPL004C CWC24P53769 259 aa8.15□□□□□ -1.1
LSP1YPL004C NIS1P53939 407 aa8.15□□□□□ -1.1
LSP1YPL004C CLU1Q03690 1277 aaKnown RBP8.15□□□□□ -1.1
LSP1YPL004C CMS1Q07897 291 aaKnown RBP8.15□□□□□ -1.1
LSP1YPL004C MSB2P32334 1306 aa8.14□□□□□ -1.11
Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms