RNA–Protein interactions for RNA: YOR157C

PUP1, Transcript of Beta 2 subunit of the 20S proteasome, yeastyeast

Gene PUP1, Length 786 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUP1YOR157C APL5Q08951 932 aaKnown RBP8.8□□□□□ -1
PUP1YOR157C VPS5Q92331 675 aa8.8□□□□□ -1
PUP1YOR157C RPS3P05750 240 aaKnown RBP8.79□□□□□ -1
PUP1YOR157C MIS1P09440 975 aaKnown RBP8.79□□□□□ -1
PUP1YOR157C TUB1P09733 447 aaKnown RBP8.79□□□□□ -1
PUP1YOR157C PUT4P15380 627 aa8.79□□□□□ -1
PUP1YOR157C ALY1P36117 915 aa8.79□□□□□ -1
PUP1YOR157C TRZ1P36159 838 aaPredicted RBP8.79□□□□□ -1
PUP1YOR157C SNZ3P43545 298 aa8.79□□□□□ -1
PUP1YOR157C NUP85P46673 744 aa8.79□□□□□ -1
PUP1YOR157C SET2P46995 733 aaKnown RBP8.79□□□□□ -1
PUP1YOR157C SNZ2P53824 298 aa8.79□□□□□ -1
PUP1YOR157C YNL040WP53960 456 aaPredicted RBP8.79□□□□□ -1
PUP1YOR157C EBS1Q03466 884 aaKnown RBP8.79□□□□□ -1
PUP1YOR157C INP2Q03824 705 aa8.79□□□□□ -1
PUP1YOR157C PPN1Q04119 674 aa8.79□□□□□ -1
PUP1YOR157C STP3Q05937 343 aa8.79□□□□□ -1
PUP1YOR157C INH1P01097 85 aa8.78□□□□□ -1
PUP1YOR157C BI2P03873 423 aa8.78□□□□□ -1
PUP1YOR157C RPL22AP05749 121 aaKnown RBP8.78□□□□□ -1
PUP1YOR157C SEC1P30619 724 aaKnown RBP8.78□□□□□ -1
PUP1YOR157C SMC1P32908 1225 aa8.78□□□□□ -1
PUP1YOR157C YKT6P36015 200 aaKnown RBP8.78□□□□□ -1
PUP1YOR157C LYS9P38999 446 aa8.78□□□□□ -1
PUP1YOR157C RPS10BP46784 105 aaKnown RBP8.78□□□□□ -1
PUP1YOR157C TRF5P48561 642 aaKnown RBP8.78□□□□□ -1
PUP1YOR157C HRQ1Q05549 1077 aa8.78□□□□□ -1
PUP1YOR157C BSC6Q08280 497 aa8.78□□□□□ -1
PUP1YOR157C RPS10AQ08745 105 aaPredicted RBP8.78□□□□□ -1
PUP1YOR157C BI3Q9ZZW7 517 aa8.78□□□□□ -1
PUP1YOR157C MTF2P10849 440 aa8.77□□□□□ -1.01
PUP1YOR157C PMA2P19657 947 aa8.77□□□□□ -1.01
PUP1YOR157C IRS4P36115 615 aaKnown RBP8.77□□□□□ -1.01
PUP1YOR157C PIM1P36775 1133 aa8.77□□□□□ -1.01
PUP1YOR157C SPT8P38915 602 aa8.77□□□□□ -1.01
PUP1YOR157C ZIM17P42844 174 aa8.77□□□□□ -1.01
PUP1YOR157C ALK1P43633 760 aaKnown RBP8.77□□□□□ -1.01
PUP1YOR157C PMT3P47190 753 aa8.77□□□□□ -1.01
PUP1YOR157C YGL260WP53056 76 aa8.77□□□□□ -1.01
PUP1YOR157C RKM2Q03942 479 aa8.77□□□□□ -1.01
PUP1YOR157C YOR238WQ08634 303 aa8.77□□□□□ -1.01
PUP1YOR157C MSL5Q12186 476 aaKnown RBP RIP-Chip data8.77□□□□□ -1.01not detected
PUP1YOR157C GLN4P13188 809 aaKnown RBP8.76□□□□□ -1.01
PUP1YOR157C RNQ1P25367 405 aa8.76□□□□□ -1.01
PUP1YOR157C EFM2P38347 419 aa8.76□□□□□ -1.01
PUP1YOR157C YER130CP39959 443 aa8.76□□□□□ -1.01
PUP1YOR157C SPG5P42933 373 aa8.76□□□□□ -1.01
PUP1YOR157C CIR1P42940 261 aa8.76□□□□□ -1.01
PUP1YOR157C ESBP6P53918 673 aa8.76□□□□□ -1.01
PUP1YOR157C TRS23Q03784 219 aa8.76□□□□□ -1.01
PUP1YOR157C SND1Q04007 877 aa8.76□□□□□ -1.01
PUP1YOR157C ARG7Q04728 441 aa8.76□□□□□ -1.01
PUP1YOR157C CDA2Q06703 312 aa8.76□□□□□ -1.01
PUP1YOR157C GUP2Q08929 609 aa8.76□□□□□ -1.01
PUP1YOR157C YPL272CQ08984 517 aa8.76□□□□□ -1.01
PUP1YOR157C AFI1Q99222 893 aa8.76□□□□□ -1.01
PUP1YOR157C MRC1P25588 1096 aa8.75□□□□□ -1.01
PUP1YOR157C SPR1P32603 445 aa8.75□□□□□ -1.01
PUP1YOR157C NRP1P32770 719 aaKnown RBP RIP-Chip data8.75□□□□□ -1.01not detected
PUP1YOR157C EXO5P38289 585 aa8.75□□□□□ -1.01
PUP1YOR157C LRP1P38801 184 aaKnown RBP8.75□□□□□ -1.01
PUP1YOR157C SMF1P38925 575 aa8.75□□□□□ -1.01
PUP1YOR157C UBX6P47049 396 aa8.75□□□□□ -1.01
PUP1YOR157C YPT11P48559 417 aa8.75□□□□□ -1.01
PUP1YOR157C SPC105P53148 917 aa8.75□□□□□ -1.01
PUP1YOR157C HST3P53687 447 aa8.75□□□□□ -1.01
PUP1YOR157C IPI3P53877 555 aa8.75□□□□□ -1.01
PUP1YOR157C RPL34AP87262 121 aaPredicted RBP8.75□□□□□ -1.01
PUP1YOR157C REG1Q00816 1014 aa8.75□□□□□ -1.01
PUP1YOR157C EGD1Q02642 157 aaKnown RBP8.75□□□□□ -1.01
PUP1YOR157C ELP4Q02884 456 aaKnown RBP8.75□□□□□ -1.01
PUP1YOR157C TRE2Q08693 809 aa8.75□□□□□ -1.01
PUP1YOR157C CDC37P06101 506 aaKnown RBP8.74□□□□□ -1.01
PUP1YOR157C MST1P07236 462 aa8.74□□□□□ -1.01
PUP1YOR157C SCH9P11792 824 aaKnown RBP8.74□□□□□ -1.01
PUP1YOR157C FAU1P40099 211 aa8.74□□□□□ -1.01
PUP1YOR157C YIL054WP40524 105 aa8.74□□□□□ -1.01
PUP1YOR157C KAP95Q06142 861 aaKnown RBP8.74□□□□□ -1.01
PUP1YOR157C THI21Q08975 551 aa8.74□□□□□ -1.01
PUP1YOR157C TRM8Q12009 286 aa8.74□□□□□ -1.01
PUP1YOR157C YPL066WQ12194 479 aa8.74□□□□□ -1.01
PUP1YOR157C YPR089WO13585 888 aa8.73□□□□□ -1.01
PUP1YOR157C GPA1P08539 472 aa8.73□□□□□ -1.01
PUP1YOR157C PDC5P16467 563 aaKnown RBP8.73□□□□□ -1.01
PUP1YOR157C RRN6P32786 894 aa8.73□□□□□ -1.01
PUP1YOR157C YEL028WP39989 153 aa8.73□□□□□ -1.01
PUP1YOR157C DLD2P46681 530 aaKnown RBP8.73□□□□□ -1.01
PUP1YOR157C SWC4P53201 476 aa8.73□□□□□ -1.01
PUP1YOR157C TEP1P53916 434 aa8.73□□□□□ -1.01
PUP1YOR157C GRX8Q05926 109 aa8.73□□□□□ -1.01
PUP1YOR157C SWC7Q06707 132 aa8.73□□□□□ -1.01
PUP1YOR157C EST1P17214 699 aaPredicted RBP8.72□□□□□ -1.01
PUP1YOR157C RBK1P25332 333 aa8.72□□□□□ -1.01
PUP1YOR157C LDB16P25587 256 aa8.72□□□□□ -1.01
PUP1YOR157C AIM26P32858 118 aa8.72□□□□□ -1.01
PUP1YOR157C NIP100P33420 868 aa8.72□□□□□ -1.01
PUP1YOR157C SCD5P34758 872 aa8.72□□□□□ -1.01
PUP1YOR157C YKL050CP35736 922 aa8.72□□□□□ -1.01
PUP1YOR157C FUI1P38196 639 aa8.72□□□□□ -1.01
PUP1YOR157C SRP72P38688 640 aaKnown RBP8.72□□□□□ -1.01
Retrieved 100 of 5,963 RNA–protein pairs in 7 ms