RNA–Protein interactions for RNA: YOR138C

RUP1, Transcript of Protein that regulates ubiquitination of Rsp5p, yeastyeast

Gene RUP1, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RUP1YOR138C MCH5Q08777 521 aa7.57□□□□□ -1.2
RUP1YOR138C SEC63P14906 663 aa7.57□□□□□ -1.2
RUP1YOR138C TSR4P25040 408 aa7.57□□□□□ -1.2
RUP1YOR138C UTR2P32623 467 aa7.57□□□□□ -1.2
RUP1YOR138C FRE1P32791 686 aa7.57□□□□□ -1.2
RUP1YOR138C ABZ1P37254 787 aaPredicted RBP7.57□□□□□ -1.2
RUP1YOR138C TBS1P38114 1094 aa7.57□□□□□ -1.2
RUP1YOR138C BZZ1P38822 633 aa7.57□□□□□ -1.2
RUP1YOR138C TGL3P40308 642 aa7.57□□□□□ -1.2
RUP1YOR138C NOP9P47077 666 aaKnown RBP7.57□□□□□ -1.2
RUP1YOR138C TRF5P48561 642 aaKnown RBP7.57□□□□□ -1.2
RUP1YOR138C REX2P54964 269 aaKnown RBP7.57□□□□□ -1.2
RUP1YOR138C SKI8Q02793 397 aaPredicted RBP7.57□□□□□ -1.2
RUP1YOR138C SPC2Q04969 178 aa7.57□□□□□ -1.2
RUP1YOR138C ENT4Q07872 247 aa7.57□□□□□ -1.2
RUP1YOR138C LDB17Q12342 491 aa7.57□□□□□ -1.2
RUP1YOR138C YMR030W-AQ3E760 96 aa7.57□□□□□ -1.2
RUP1YOR138C SAT4P25333 603 aaKnown RBP7.56□□□□□ -1.2
RUP1YOR138C LRE1P25579 583 aaKnown RBP7.56□□□□□ -1.2
RUP1YOR138C ADY2P25613 283 aa7.56□□□□□ -1.2
RUP1YOR138C TFC1P32367 649 aa7.56□□□□□ -1.2
RUP1YOR138C SMY2P32909 740 aaKnown RBP7.56□□□□□ -1.2
RUP1YOR138C BUD2P33314 1104 aa7.56□□□□□ -1.2
RUP1YOR138C RDH54P38086 958 aa7.56□□□□□ -1.2
RUP1YOR138C AGP2P38090 596 aa7.56□□□□□ -1.2
RUP1YOR138C PNT1P38969 423 aa7.56□□□□□ -1.2
RUP1YOR138C FMP32P43557 207 aa7.56□□□□□ -1.2
RUP1YOR138C RRT5P43607 289 aa7.56□□□□□ -1.2
RUP1YOR138C RSC8P43609 557 aaKnown RBP7.56□□□□□ -1.2
RUP1YOR138C YGL108CP53139 140 aa7.56□□□□□ -1.2
RUP1YOR138C YTP1P53584 459 aa7.56□□□□□ -1.2
RUP1YOR138C FPK1P53739 893 aa7.56□□□□□ -1.2
RUP1YOR138C YAF9P53930 226 aa7.56□□□□□ -1.2
RUP1YOR138C SNU56Q03782 492 aaKnown RBP7.56□□□□□ -1.2
RUP1YOR138C HFI1Q12060 488 aa7.56□□□□□ -1.2
RUP1YOR138C ATG11Q12527 1178 aa7.56□□□□□ -1.2
RUP1YOR138C CHS1P08004 1131 aa7.56□□□□□ -1.2
RUP1YOR138C SUI3P09064 285 aaKnown RBP7.56□□□□□ -1.2
RUP1YOR138C WHI2P12611 486 aa7.56□□□□□ -1.2
RUP1YOR138C YPK1P12688 680 aaKnown RBP7.56□□□□□ -1.2
RUP1YOR138C ATR1P13090 542 aa7.56□□□□□ -1.2
RUP1YOR138C HRR25P29295 494 aaKnown RBP7.56□□□□□ -1.2
RUP1YOR138C DAL1P32375 460 aa7.56□□□□□ -1.2
RUP1YOR138C PEP12P32854 288 aa7.56□□□□□ -1.2
RUP1YOR138C PEX5P35056 612 aa7.56□□□□□ -1.2
RUP1YOR138C OTU2P38747 307 aaKnown RBP7.56□□□□□ -1.2
RUP1YOR138C RFX1P48743 811 aa7.56□□□□□ -1.2
RUP1YOR138C NAN1Q02931 896 aaKnown RBP7.56□□□□□ -1.2
RUP1YOR138C MSC6Q08818 692 aaKnown RBP7.56□□□□□ -1.2
RUP1YOR138C CBC2Q08920 208 aaKnown RBP RIP-Chip data7.56□□□□□ -1.2not detected
RUP1YOR138C REC8Q12188 680 aa7.56□□□□□ -1.2
RUP1YOR138C DPB2P24482 689 aaPredicted RBP7.55□□□□□ -1.2
RUP1YOR138C ASK1P35734 292 aa7.55□□□□□ -1.2
RUP1YOR138C GIP1P38229 639 aa7.55□□□□□ -1.2
RUP1YOR138C MND2P40577 368 aa7.55□□□□□ -1.2
RUP1YOR138C PFD1P46988 109 aa7.55□□□□□ -1.2
RUP1YOR138C YPR003CP53394 754 aa7.55□□□□□ -1.2
RUP1YOR138C CUS2P53830 285 aaPredicted RBP7.55□□□□□ -1.2
RUP1YOR138C TMA20P89886 181 aaPredicted RBP7.55□□□□□ -1.2
RUP1YOR138C CSN9Q03981 162 aa7.55□□□□□ -1.2
RUP1YOR138C YIG1Q08956 461 aa7.55□□□□□ -1.2
RUP1YOR138C GET4Q12125 312 aa7.55□□□□□ -1.2
RUP1YOR138C LAA1P39526 2014 aa7.54□□□□□ -1.2
RUP1YOR138C STE2D6VTK4 431 aa7.54□□□□□ -1.2
RUP1YOR138C CAR1P00812 333 aaKnown RBP7.54□□□□□ -1.2
RUP1YOR138C ATP2P00830 511 aaKnown RBP7.54□□□□□ -1.2
RUP1YOR138C RHO2P06781 192 aa7.54□□□□□ -1.2
RUP1YOR138C HSC82P15108 705 aaKnown RBP7.54□□□□□ -1.2
RUP1YOR138C ADE2P21264 571 aaKnown RBP7.54□□□□□ -1.2
RUP1YOR138C AIM18P38884 321 aa7.54□□□□□ -1.2
RUP1YOR138C NUP60P39705 539 aa7.54□□□□□ -1.2
RUP1YOR138C RRD1P40454 393 aaKnown RBP7.54□□□□□ -1.2
RUP1YOR138C CAB2P40506 365 aa7.54□□□□□ -1.2
RUP1YOR138C CCT7P42943 550 aaKnown RBP7.54□□□□□ -1.2
RUP1YOR138C BNA3P47039 444 aaKnown RBP7.54□□□□□ -1.2
RUP1YOR138C JJJ3P47138 172 aa7.54□□□□□ -1.2
RUP1YOR138C MUB1Q03162 620 aa7.54□□□□□ -1.2
RUP1YOR138C COX4P04037 155 aa7.54□□□□□ -1.2
RUP1YOR138C ADE4P04046 510 aaKnown RBP7.54□□□□□ -1.2
RUP1YOR138C ERG20P08524 352 aaKnown RBP7.54□□□□□ -1.2
RUP1YOR138C STE6P12866 1290 aa7.54□□□□□ -1.2
RUP1YOR138C GCY1P14065 312 aaKnown RBP RIP-Chip data7.54□□□□□ -1.2not detected
RUP1YOR138C SEC15P22224 910 aa7.54□□□□□ -1.2
RUP1YOR138C HEM12P32347 362 aaPredicted RBP7.54□□□□□ -1.2
RUP1YOR138C GCD11P32481 527 aaKnown RBP7.54□□□□□ -1.2
RUP1YOR138C GDA1P32621 518 aa7.54□□□□□ -1.2
RUP1YOR138C ATG12P38316 186 aa7.54□□□□□ -1.2
RUP1YOR138C YHR054CP38780 354 aa7.54□□□□□ -1.2
RUP1YOR138C RSC30P38781 883 aa7.54□□□□□ -1.2
RUP1YOR138C APE4P38821 490 aa7.54□□□□□ -1.2
RUP1YOR138C PRM2P40534 656 aa7.54□□□□□ -1.2
RUP1YOR138C YMR155WQ03795 547 aa7.54□□□□□ -1.2
RUP1YOR138C CDC123Q05791 360 aa7.54□□□□□ -1.2
RUP1YOR138C NRT1Q08485 598 aa7.54□□□□□ -1.2
RUP1YOR138C MET7Q08645 548 aa7.54□□□□□ -1.2
RUP1YOR138C CFT2Q12102 859 aaPredicted RBP7.54□□□□□ -1.2
RUP1YOR138C HOS1Q12214 470 aa7.54□□□□□ -1.2
RUP1YOR138C NTO1Q12311 748 aa7.54□□□□□ -1.2
RUP1YOR138C COX6P00427 148 aa7.53□□□□□ -1.2
RUP1YOR138C HSF1P10961 833 aa7.53□□□□□ -1.2
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms