RNA–Protein interactions for RNA: YOR106W

VAM3, Transcript of Syntaxin-like vacuolar t-SNARE, yeastyeast

Gene VAM3, Length 852 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAM3YOR106W YCR061WP25639 631 aa5.3□□□□□ -1.56
VAM3YOR106W POL31P46957 487 aa5.3□□□□□ -1.56
VAM3YOR106W PUS4P48567 403 aaKnown RBP5.3□□□□□ -1.56
VAM3YOR106W PLM2Q04383 521 aa5.3□□□□□ -1.56
VAM3YOR106W CRF1Q04930 467 aa5.3□□□□□ -1.56
VAM3YOR106W CRD1Q07560 283 aa5.3□□□□□ -1.56
VAM3YOR106W SWD1P39706 426 aa5.29□□□□□ -1.56
VAM3YOR106W YNL034WP53963 612 aa5.29□□□□□ -1.56
VAM3YOR106W ACS1Q01574 713 aa5.29□□□□□ -1.56
VAM3YOR106W VPS64Q03944 604 aa5.29□□□□□ -1.56
VAM3YOR106W LCB4Q12246 624 aa5.29□□□□□ -1.56
VAM3YOR106W YAP1P19880 650 aaKnown RBP5.28□□□□□ -1.56
VAM3YOR106W RRP43P25359 394 aaPredicted RBP5.28□□□□□ -1.56
VAM3YOR106W ARO9P38840 513 aaPredicted RBP5.28□□□□□ -1.56
VAM3YOR106W JHD1P40034 492 aa5.28□□□□□ -1.56
VAM3YOR106W IMA5P40884 581 aa5.28□□□□□ -1.56
VAM3YOR106W MPS1P54199 764 aa5.28□□□□□ -1.56
VAM3YOR106W YML053CQ04978 212 aa5.28□□□□□ -1.56
VAM3YOR106W YDL242WQ07746 117 aa5.28□□□□□ -1.56
VAM3YOR106W YOR389WQ08912 624 aa5.28□□□□□ -1.56
VAM3YOR106W CRC1Q12289 327 aa5.28□□□□□ -1.56
VAM3YOR106W ECM32P32644 1121 aaKnown RBP5.27□□□□□ -1.57
VAM3YOR106W FTH1P38310 465 aa5.27□□□□□ -1.57
VAM3YOR106W SAP1P39955 897 aaKnown RBP5.27□□□□□ -1.57
VAM3YOR106W IRC7P43623 340 aa5.27□□□□□ -1.57
VAM3YOR106W AAD4Q07747 329 aa5.27□□□□□ -1.57
VAM3YOR106W YMR085WP0CF18 432 aa5.26□□□□□ -1.57
VAM3YOR106W KGD2P19262 463 aaPredicted RBP5.26□□□□□ -1.57
VAM3YOR106W NIC96P34077 839 aa5.26□□□□□ -1.57
VAM3YOR106W ARB1P40024 610 aaKnown RBP5.26□□□□□ -1.57
VAM3YOR106W MNT3P40549 630 aa5.26□□□□□ -1.57
VAM3YOR106W SNU56Q03782 492 aaKnown RBP5.26□□□□□ -1.57
VAM3YOR106W SND1Q04007 877 aa5.26□□□□□ -1.57
VAM3YOR106W ARP7Q12406 477 aa5.26□□□□□ -1.57
VAM3YOR106W RTC1Q08281 1341 aa5.25□□□□□ -1.57
VAM3YOR106W CET1O13297 549 aaPredicted RBP5.25□□□□□ -1.57
VAM3YOR106W SWC3P31376 625 aa5.25□□□□□ -1.57
VAM3YOR106W KES1P35844 434 aaKnown RBP5.25□□□□□ -1.57
VAM3YOR106W VPS8P39702 1274 aa5.25□□□□□ -1.57
VAM3YOR106W ILS1P09436 1072 aaKnown RBP5.24□□□□□ -1.57
VAM3YOR106W SIP1P32578 815 aa5.24□□□□□ -1.57
VAM3YOR106W NOP2P40991 618 aaKnown RBP5.24□□□□□ -1.57
VAM3YOR106W GEP3Q08622 556 aa5.24□□□□□ -1.57
VAM3YOR106W TMA7Q3E764 64 aaKnown RBP5.24□□□□□ -1.57
VAM3YOR106W MPD2Q99316 277 aa5.24□□□□□ -1.57
VAM3YOR106W Q0010Q9ZZX9 128 aa5.24□□□□□ -1.57
VAM3YOR106W PDE1P22434 369 aa5.23□□□□□ -1.57
VAM3YOR106W COQ3P27680 312 aa5.23□□□□□ -1.57
VAM3YOR106W RPF2P36160 344 aaKnown RBP5.23□□□□□ -1.57
VAM3YOR106W IMD2P38697 523 aaKnown RBP5.23□□□□□ -1.57
VAM3YOR106W SPC97P38863 823 aa5.23□□□□□ -1.57
VAM3YOR106W PCI8P40512 444 aa5.23□□□□□ -1.57
VAM3YOR106W YIL024CP40543 189 aa5.23□□□□□ -1.57
VAM3YOR106W IMD3P50095 523 aaKnown RBP5.23□□□□□ -1.57
VAM3YOR106W CEG1Q01159 459 aaPredicted RBP5.23□□□□□ -1.57
VAM3YOR106W AIM6Q07716 390 aa5.23□□□□□ -1.57
VAM3YOR106W YPL191CQ08930 360 aa5.23□□□□□ -1.57
VAM3YOR106W SCW4P53334 386 aaKnown RBP5.22□□□□□ -1.57
VAM3YOR106W ESF2P53743 316 aaKnown RBP5.22□□□□□ -1.57
VAM3YOR106W TGL2P54857 326 aa5.22□□□□□ -1.57
VAM3YOR106W ILV2P07342 687 aaKnown RBP5.21□□□□□ -1.58
VAM3YOR106W MAK32P23060 363 aa5.21□□□□□ -1.58
VAM3YOR106W VBA2P38358 474 aaKnown RBP5.21□□□□□ -1.58
VAM3YOR106W CIN1P40987 1014 aa5.21□□□□□ -1.58
VAM3YOR106W MAD3P47074 515 aa5.21□□□□□ -1.58
VAM3YOR106W TAN1P53072 289 aaPredicted RBP5.21□□□□□ -1.58
VAM3YOR106W PEX8P53248 589 aa5.21□□□□□ -1.58
VAM3YOR106W COP1P53622 1201 aaKnown RBP5.21□□□□□ -1.58
VAM3YOR106W RAD34Q06665 692 aa5.21□□□□□ -1.58
VAM3YOR106W LYS21Q12122 440 aaKnown RBP5.21□□□□□ -1.58
VAM3YOR106W YOL114CQ12322 202 aa5.21□□□□□ -1.58
VAM3YOR106W SES1P07284 462 aaKnown RBP5.2□□□□□ -1.58
VAM3YOR106W YMR124WP39523 943 aaKnown RBP5.2□□□□□ -1.58
VAM3YOR106W CFD1P40558 293 aa5.2□□□□□ -1.58
VAM3YOR106W YAT1P80235 687 aa5.2□□□□□ -1.58
VAM3YOR106W YBR255C-AQ3E776 120 aa5.2□□□□□ -1.58
VAM3YOR106W YPR089WO13585 888 aa5.19□□□□□ -1.58
VAM3YOR106W SST2P11972 698 aaKnown RBP5.19□□□□□ -1.58
VAM3YOR106W ASK1P35734 292 aa5.19□□□□□ -1.58
VAM3YOR106W YKL133CP36066 463 aa5.19□□□□□ -1.58
VAM3YOR106W MRPL1Q04599 285 aa5.19□□□□□ -1.58
VAM3YOR106W TOM20P35180 183 aa5.18□□□□□ -1.58
VAM3YOR106W GRX7P38068 203 aa5.18□□□□□ -1.58
VAM3YOR106W ERC1P38767 581 aa5.18□□□□□ -1.58
VAM3YOR106W STT3P39007 718 aaKnown RBP5.18□□□□□ -1.58
VAM3YOR106W CAB2P40506 365 aa5.18□□□□□ -1.58
VAM3YOR106W TEP1P53916 434 aa5.18□□□□□ -1.58
VAM3YOR106W YPL068CQ02749 293 aa5.18□□□□□ -1.58
VAM3YOR106W YPL108WQ02872 168 aaPredicted RBP5.18□□□□□ -1.58
VAM3YOR106W HER1Q12276 1246 aa5.18□□□□□ -1.58
VAM3YOR106W FLO5P38894 1075 aa5.17□□□□□ -1.58
VAM3YOR106W FUN12P39730 1002 aaKnown RBP5.17□□□□□ -1.58
VAM3YOR106W ARA2Q04212 335 aa5.17□□□□□ -1.58
VAM3YOR106W ICL2Q12031 575 aa5.17□□□□□ -1.58
VAM3YOR106W GET3Q12154 354 aaKnown RBP5.17□□□□□ -1.58
VAM3YOR106W SIR1P21691 654 aa5.16□□□□□ -1.58
VAM3YOR106W PTC6P25646 442 aa5.16□□□□□ -1.58
VAM3YOR106W NPA3P47122 385 aa5.16□□□□□ -1.58
VAM3YOR106W ORC5P50874 479 aa5.16□□□□□ -1.58
VAM3YOR106W CIR2Q08822 631 aa5.16□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 60.1 ms