RNA–Protein interactions for RNA: YOR098C

NUP1, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeast

Gene NUP1, Length 3,231 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUP1	YOR098C	NUP157	P40064	1391 aa	Known RBP	5.7	□□□□□ -1.5
NUP1	YOR098C	CCT7	P42943	550 aa	Known RBP	5.7	□□□□□ -1.5
NUP1	YOR098C	YGR130C	P53278	816 aa		5.7	□□□□□ -1.5
NUP1	YOR098C	SOK2	P53438	785 aa	Predicted RBP	5.7	□□□□□ -1.5
NUP1	YOR098C	RAD30	Q04049	632 aa		5.7	□□□□□ -1.5
NUP1	YOR098C	TRI1	Q05024	226 aa		5.7	□□□□□ -1.5
NUP1	YOR098C	RPS9A	O13516	197 aa	Known RBP	5.7	□□□□□ -1.5
NUP1	YOR098C	BST1	P43571	1029 aa		5.7	□□□□□ -1.5
NUP1	YOR098C	EOS1	P53938	366 aa		5.7	□□□□□ -1.5
NUP1	YOR098C	BUD3	P25558	1636 aa		5.7	□□□□□ -1.5
NUP1	YOR098C	SAC3	P46674	1301 aa		5.7	□□□□□ -1.5
NUP1	YOR098C	CBS1	P14066	229 aa		5.69	□□□□□ -1.5
NUP1	YOR098C	SNF5	P18480	905 aa		5.69	□□□□□ -1.5
NUP1	YOR098C	YHR131C	P38835	850 aa		5.69	□□□□□ -1.5
NUP1	YOR098C	FLC2	P39719	783 aa		5.69	□□□□□ -1.5
NUP1	YOR098C	SSU1	P41930	458 aa		5.69	□□□□□ -1.5
NUP1	YOR098C	SPO1	P53541	631 aa		5.69	□□□□□ -1.5
NUP1	YOR098C	GTB1	Q04924	702 aa		5.69	□□□□□ -1.5
NUP1	YOR098C	PSY3	Q12318	242 aa		5.69	□□□□□ -1.5
NUP1	YOR098C	GPM3	Q12326	303 aa		5.69	□□□□□ -1.5
NUP1	YOR098C	YRF1-1	P0CX20	1796 aa		5.69	□□□□□ -1.5
NUP1	YOR098C	YRF1-5	P0CX21	1796 aa		5.69	□□□□□ -1.5
NUP1	YOR098C	YRF1-8	P0CX22	1796 aa		5.69	□□□□□ -1.5
NUP1	YOR098C	YRF1-4	O13559	1382 aa		5.69	□□□□□ -1.5
NUP1	YOR098C	YLR302C	O13544	120 aa		5.69	□□□□□ -1.5
NUP1	YOR098C	URA3	P03962	267 aa		5.69	□□□□□ -1.5
NUP1	YOR098C	LAT1	P12695	482 aa	Known RBP	5.69	□□□□□ -1.5
NUP1	YOR098C	SMF1	P38925	575 aa		5.69	□□□□□ -1.5
NUP1	YOR098C	OSW5	P40219	148 aa		5.69	□□□□□ -1.5
NUP1	YOR098C	CLA4	P48562	842 aa		5.69	□□□□□ -1.5
NUP1	YOR098C	COG1	P53079	417 aa		5.69	□□□□□ -1.5
NUP1	YOR098C	SNF12	P53628	566 aa		5.69	□□□□□ -1.5
NUP1	YOR098C	GCR2	Q01722	534 aa		5.69	□□□□□ -1.5
NUP1	YOR098C	FMP45	Q07651	309 aa		5.69	□□□□□ -1.5
NUP1	YOR098C	RCN2	Q12044	265 aa		5.69	□□□□□ -1.5
NUP1	YOR098C	ATG11	Q12527	1178 aa		5.69	□□□□□ -1.5
NUP1	YOR098C	ISN1	Q99312	450 aa		5.69	□□□□□ -1.5
NUP1	YOR098C	PDR12	Q02785	1511 aa		5.69	□□□□□ -1.5
NUP1	YOR098C	CDC19	P00549	500 aa	Known RBP	5.69	□□□□□ -1.5
NUP1	YOR098C	RPB2	P08518	1224 aa	Known RBP	5.69	□□□□□ -1.5
NUP1	YOR098C	SPB1	P25582	841 aa	Predicted RBP	5.69	□□□□□ -1.5
NUP1	YOR098C	FSH1	P38777	243 aa	Known RBP	5.69	□□□□□ -1.5
NUP1	YOR098C	AIP1	P46680	615 aa	Known RBP	5.69	□□□□□ -1.5
NUP1	YOR098C	PRO2	P54885	456 aa	Known RBP	5.69	□□□□□ -1.5
NUP1	YOR098C	YKR011C	Q02209	353 aa		5.69	□□□□□ -1.5
NUP1	YOR098C	STE12	P13574	688 aa		5.68	□□□□□ -1.5
NUP1	YOR098C	RSC6	P25632	483 aa		5.68	□□□□□ -1.5
NUP1	YOR098C	RPD3	P32561	433 aa		5.68	□□□□□ -1.5
NUP1	YOR098C	PCH2	P38126	564 aa		5.68	□□□□□ -1.5
NUP1	YOR098C	ATF1	P40353	525 aa		5.68	□□□□□ -1.5
NUP1	YOR098C	MET18	P40469	1032 aa		5.68	□□□□□ -1.5
NUP1	YOR098C	BUD27	P43573	796 aa	Known RBP RIP-Chip data	5.68	□□□□□ -1.5	not detected
NUP1	YOR098C	ENP2	P48234	707 aa	Known RBP	5.68	□□□□□ -1.5
NUP1	YOR098C	RPP1A	P05318	106 aa	Predicted RBP	5.68	□□□□□ -1.5
NUP1	YOR098C	OM45	P16547	393 aa		5.68	□□□□□ -1.5
NUP1	YOR098C	KAR3	P17119	729 aa		5.68	□□□□□ -1.5
NUP1	YOR098C	ERS1	P17261	260 aa		5.68	□□□□□ -1.5
NUP1	YOR098C	MDH1	P17505	334 aa	Known RBP RIP-Chip data	5.68	□□□□□ -1.5	not detected
NUP1	YOR098C	GCV2	P49095	1034 aa		5.68	□□□□□ -1.5
NUP1	YOR098C	CUL3	P53202	744 aa		5.68	□□□□□ -1.5
NUP1	YOR098C	JJJ1	P53863	590 aa		5.68	□□□□□ -1.5
NUP1	YOR098C	RCR2	Q03446	210 aa	Known RBP	5.68	□□□□□ -1.5
NUP1	YOR098C	SPE3	Q12074	293 aa	Known RBP	5.68	□□□□□ -1.5
NUP1	YOR098C	NBP2	Q12163	236 aa		5.68	□□□□□ -1.5
NUP1	YOR098C	MDY2	Q12285	212 aa		5.68	□□□□□ -1.5
NUP1	YOR098C	EDE1	P34216	1381 aa		5.67	□□□□□ -1.5
NUP1	YOR098C	PCK1	P10963	549 aa		5.67	□□□□□ -1.5
NUP1	YOR098C	PWP1	P21304	576 aa	Known RBP	5.67	□□□□□ -1.5
NUP1	YOR098C	URA7	P28274	579 aa	Known RBP	5.67	□□□□□ -1.5
NUP1	YOR098C	NIP1	P32497	812 aa	Known RBP	5.67	□□□□□ -1.5
NUP1	YOR098C	LOT5	P34234	306 aa		5.67	□□□□□ -1.5
NUP1	YOR098C	UBP13	P38187	747 aa		5.67	□□□□□ -1.5
NUP1	YOR098C	YHR097C	P38809	366 aa	Known RBP	5.67	□□□□□ -1.5
NUP1	YOR098C	LEM3	P42838	414 aa		5.67	□□□□□ -1.5
NUP1	YOR098C	AGX1	P43567	385 aa		5.67	□□□□□ -1.5
NUP1	YOR098C	YMR074C	Q04773	145 aa		5.67	□□□□□ -1.5
NUP1	YOR098C	YLR456W	Q06199	204 aa		5.67	□□□□□ -1.5
NUP1	YOR098C	MMR1	Q06324	491 aa		5.67	□□□□□ -1.5
NUP1	YOR098C	GPB1	Q08886	897 aa		5.67	□□□□□ -1.5
NUP1	YOR098C	IME1	P21190	360 aa		5.67	□□□□□ -1.5
NUP1	YOR098C	ARG1	P22768	420 aa		5.67	□□□□□ -1.5
NUP1	YOR098C	PRP28	P23394	588 aa		5.67	□□□□□ -1.5
NUP1	YOR098C	LRG1	P35688	1017 aa		5.67	□□□□□ -1.5
NUP1	YOR098C	MIP6	P38760	659 aa	Known RBP	5.67	□□□□□ -1.5
NUP1	YOR098C	REG1	Q00816	1014 aa		5.67	□□□□□ -1.5
NUP1	YOR098C	YAP6	Q03935	383 aa		5.67	□□□□□ -1.5
NUP1	YOR098C	PML1	Q07930	204 aa	Predicted RBP	5.67	□□□□□ -1.5
NUP1	YOR098C	ICL2	Q12031	575 aa		5.67	□□□□□ -1.5
NUP1	YOR098C	LTE1	P07866	1435 aa		5.67	□□□□□ -1.5
NUP1	YOR098C	SUR1	P33300	382 aa		5.67	□□□□□ -1.5
NUP1	YOR098C	SWH1	P35845	1188 aa		5.67	□□□□□ -1.5
NUP1	YOR098C	ADH5	P38113	351 aa	Known RBP	5.67	□□□□□ -1.5
NUP1	YOR098C	CAB2	P40506	365 aa		5.67	□□□□□ -1.5
NUP1	YOR098C	BUD8	P41698	603 aa		5.67	□□□□□ -1.5
NUP1	YOR098C	GIS4	Q04233	774 aa		5.67	□□□□□ -1.5
NUP1	YOR098C	SPH1	Q06160	661 aa		5.67	□□□□□ -1.5
NUP1	YOR098C	CRD1	Q07560	283 aa		5.67	□□□□□ -1.5
NUP1	YOR098C	XYL2	Q07993	356 aa		5.67	□□□□□ -1.5
NUP1	YOR098C	HEL1	P36113	551 aa		5.66	□□□□□ -1.5
NUP1	YOR098C	EXG2	P52911	562 aa		5.66	□□□□□ -1.5

Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms