RNA–Protein interactions for RNA: YOL005C

RPB11, Transcript of RNA polymerase II subunit B12.5, yeastyeast

Gene RPB11, Length 363 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB11YOL005C YCR061WP25639 631 aa2.9□□□□□ -1.95
RPB11YOL005C GCD7P32502 381 aaPredicted RBP2.9□□□□□ -1.95
RPB11YOL005C RPC34P32910 317 aa2.9□□□□□ -1.95
RPB11YOL005C HOT13P36078 116 aa2.9□□□□□ -1.95
RPB11YOL005C SPC72P39723 622 aa2.9□□□□□ -1.95
RPB11YOL005C EXO1P39875 702 aa2.9□□□□□ -1.95
RPB11YOL005C ATG21Q02887 496 aa2.9□□□□□ -1.95
RPB11YOL005C OSW1Q08692 278 aa2.9□□□□□ -1.95
RPB11YOL005C YOR389WQ08912 624 aa2.9□□□□□ -1.95
RPB11YOL005C YMR084WA2P2R3 262 aa2.89□□□□□ -1.95
RPB11YOL005C LEU2P04173 364 aaPredicted RBP2.89□□□□□ -1.95
RPB11YOL005C AMD2P22580 549 aa2.89□□□□□ -1.95
RPB11YOL005C CLB4P24871 460 aa2.89□□□□□ -1.95
RPB11YOL005C SWC3P31376 625 aa2.89□□□□□ -1.95
RPB11YOL005C RRP8P38961 392 aaKnown RBP2.89□□□□□ -1.95
RPB11YOL005C SAP1P39955 897 aaKnown RBP2.89□□□□□ -1.95
RPB11YOL005C MAM1P40065 302 aa2.89□□□□□ -1.95
RPB11YOL005C LAS21P40367 830 aa2.89□□□□□ -1.95
RPB11YOL005C OPT1P40897 799 aa2.89□□□□□ -1.95
RPB11YOL005C SKP2P42843 763 aa2.89□□□□□ -1.95
RPB11YOL005C ATP23P53722 227 aa2.89□□□□□ -1.95
RPB11YOL005C YPL071CQ02864 156 aa2.89□□□□□ -1.95
RPB11YOL005C YPL108WQ02872 168 aaPredicted RBP2.89□□□□□ -1.95
RPB11YOL005C YML122CQ03207 126 aa2.89□□□□□ -1.95
RPB11YOL005C ORM2Q06144 216 aa2.89□□□□□ -1.95
RPB11YOL005C AIM6Q07716 390 aa2.89□□□□□ -1.95
RPB11YOL005C YDL242WQ07746 117 aa2.89□□□□□ -1.95
RPB11YOL005C NDJ1Q12366 352 aa2.89□□□□□ -1.95
RPB11YOL005C YNL162W-AQ3E7A8 72 aa2.89□□□□□ -1.95
RPB11YOL005C NUC1P08466 329 aa2.88□□□□□ -1.95
RPB11YOL005C PRP45P28004 379 aaPredicted RBP2.88□□□□□ -1.95
RPB11YOL005C RPF2P36160 344 aaKnown RBP2.88□□□□□ -1.95
RPB11YOL005C ACA1P39970 489 aa2.88□□□□□ -1.95
RPB11YOL005C PUG1P40100 303 aa2.88□□□□□ -1.95
RPB11YOL005C PSF2P40359 213 aa2.88□□□□□ -1.95
RPB11YOL005C PAP2P53632 584 aaKnown RBP2.88□□□□□ -1.95
RPB11YOL005C CPR6P53691 371 aaKnown RBP2.88□□□□□ -1.95
RPB11YOL005C YNL092WP53934 400 aa2.88□□□□□ -1.95
RPB11YOL005C RAD33Q04231 177 aa2.88□□□□□ -1.95
RPB11YOL005C PLM2Q04383 521 aa2.88□□□□□ -1.95
RPB11YOL005C PNO1Q99216 274 aaKnown RBP2.88□□□□□ -1.95
RPB11YOL005C RTC1Q08281 1341 aa2.88□□□□□ -1.95
RPB11YOL005C CHO2P05374 869 aaKnown RBP2.87□□□□□ -1.95
RPB11YOL005C PET122P10355 254 aa2.87□□□□□ -1.95
RPB11YOL005C PDE1P22434 369 aa2.87□□□□□ -1.95
RPB11YOL005C RRP43P25359 394 aaPredicted RBP2.87□□□□□ -1.95
RPB11YOL005C DBF20P32328 564 aa2.87□□□□□ -1.95
RPB11YOL005C ARP2P32381 391 aaKnown RBP2.87□□□□□ -1.95
RPB11YOL005C MRS6P32864 603 aaKnown RBP2.87□□□□□ -1.95
RPB11YOL005C PTH2P34222 208 aa2.87□□□□□ -1.95
RPB11YOL005C MRPL36P36531 177 aa2.87□□□□□ -1.95
RPB11YOL005C FUN12P39730 1002 aaKnown RBP2.87□□□□□ -1.95
RPB11YOL005C ERR3P42222 437 aa2.87□□□□□ -1.95
RPB11YOL005C ZAP1P47043 880 aa2.87□□□□□ -1.95
RPB11YOL005C UBX6P47049 396 aa2.87□□□□□ -1.95
RPB11YOL005C CYK3Q07533 885 aa2.87□□□□□ -1.95
RPB11YOL005C ILV2P07342 687 aaKnown RBP2.86□□□□□ -1.95
RPB11YOL005C MDM10P18409 493 aa2.86□□□□□ -1.95
RPB11YOL005C MSM1P22438 575 aa2.86□□□□□ -1.95
RPB11YOL005C APN1P22936 367 aa2.86□□□□□ -1.95
RPB11YOL005C URE2P23202 354 aaKnown RBP2.86□□□□□ -1.95
RPB11YOL005C FRD1P32614 470 aaKnown RBP2.86□□□□□ -1.95
RPB11YOL005C YBR138CP38277 524 aa2.86□□□□□ -1.95
RPB11YOL005C APD1P38281 316 aa2.86□□□□□ -1.95
RPB11YOL005C XBP1P40489 647 aa2.86□□□□□ -1.95
RPB11YOL005C TAM41P53230 385 aa2.86□□□□□ -1.95
RPB11YOL005C YGR079WP53249 370 aa2.86□□□□□ -1.95
RPB11YOL005C RIM13Q03792 727 aa2.86□□□□□ -1.95
RPB11YOL005C ATG16Q03818 150 aa2.86□□□□□ -1.95
RPB11YOL005C VMS1Q04311 632 aaKnown RBP2.86□□□□□ -1.95
RPB11YOL005C HRD3Q05787 833 aa2.86□□□□□ -1.95
RPB11YOL005C COQ11Q05892 277 aa2.86□□□□□ -1.95
RPB11YOL005C STP3Q05937 343 aa2.86□□□□□ -1.95
RPB11YOL005C BLS1Q06071 122 aa2.86□□□□□ -1.95
RPB11YOL005C RDL1Q12305 139 aaKnown RBP2.86□□□□□ -1.95
RPB11YOL005C RVB2Q12464 471 aaKnown RBP2.86□□□□□ -1.95
RPB11YOL005C COX1P00401 534 aa2.85□□□□□ -1.95
RPB11YOL005C RAD16P31244 790 aa2.85□□□□□ -1.95
RPB11YOL005C VPS8P39702 1274 aa2.85□□□□□ -1.95
RPB11YOL005C RPT2P40327 437 aaKnown RBP2.85□□□□□ -1.95
RPB11YOL005C TDA10P42938 290 aa2.85□□□□□ -1.95
RPB11YOL005C CIR1P42940 261 aa2.85□□□□□ -1.95
RPB11YOL005C NPA3P47122 385 aa2.85□□□□□ -1.95
RPB11YOL005C MRPL13Q02204 264 aa2.85□□□□□ -1.95
RPB11YOL005C TRS130Q03660 1102 aa2.85□□□□□ -1.95
RPB11YOL005C SEG1Q04279 960 aa2.85□□□□□ -1.95
RPB11YOL005C TPO3Q06451 622 aa2.85□□□□□ -1.95
RPB11YOL005C IRC3Q06683 689 aa2.85□□□□□ -1.95
RPB11YOL005C LCB4Q12246 624 aa2.85□□□□□ -1.95
RPB11YOL005C SUL2Q12325 893 aa2.85□□□□□ -1.95
RPB11YOL005C PGK1P00560 416 aaKnown RBP2.84□□□□□ -1.95
RPB11YOL005C NCP1P16603 691 aaKnown RBP2.84□□□□□ -1.95
RPB11YOL005C PFK2P16862 959 aaKnown RBP RIP-Chip data2.84□□□□□ -1.95not detected
RPB11YOL005C YJU2P28320 278 aaPredicted RBP2.84□□□□□ -1.95
RPB11YOL005C BEM3P32873 1128 aa2.84□□□□□ -1.95
RPB11YOL005C NUP120P35729 1037 aa2.84□□□□□ -1.95
RPB11YOL005C FSH1P38777 243 aaKnown RBP2.84□□□□□ -1.95
RPB11YOL005C SAP185P40856 1058 aa2.84□□□□□ -1.95
RPB11YOL005C SMK1P41808 388 aa2.84□□□□□ -1.95
RPB11YOL005C MTG1Q03151 367 aaPredicted RBP2.84□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 18.1 ms