RNA–Protein interactions for RNA: YNR001C

CIT1, Transcript of Citrate synthase, yeast

Gene CIT1, Length 1,440 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CIT1	YNR001C	STE13	P33894	931 aa		4.08	□□□□□ -1.76
CIT1	YNR001C	RXT2	P38255	430 aa		4.08	□□□□□ -1.76
CIT1	YNR001C	IFA38	P38286	347 aa		4.08	□□□□□ -1.76
CIT1	YNR001C	LRP1	P38801	184 aa	Known RBP	4.08	□□□□□ -1.76
CIT1	YNR001C	STT3	P39007	718 aa	Known RBP	4.08	□□□□□ -1.76
CIT1	YNR001C	TPA1	P40032	644 aa	Known RBP	4.08	□□□□□ -1.76
CIT1	YNR001C	URM1	P40554	99 aa	Predicted RBP	4.08	□□□□□ -1.76
CIT1	YNR001C	CTF18	P49956	741 aa		4.08	□□□□□ -1.76
CIT1	YNR001C	RAI1	P53063	387 aa	Known RBP	4.08	□□□□□ -1.76
CIT1	YNR001C	PIL1	P53252	339 aa	Known RBP	4.08	□□□□□ -1.76
CIT1	YNR001C	HDA1	P53973	706 aa		4.08	□□□□□ -1.76
CIT1	YNR001C	CTF4	Q01454	927 aa		4.08	□□□□□ -1.76
CIT1	YNR001C	UTP21	Q06078	939 aa	Predicted RBP	4.08	□□□□□ -1.76
CIT1	YNR001C	HOS1	Q12214	470 aa		4.08	□□□□□ -1.76
CIT1	YNR001C	YBT1	P32386	1661 aa		4.08	□□□□□ -1.76
CIT1	YNR001C	STF1	P01098	86 aa		4.07	□□□□□ -1.76
CIT1	YNR001C	GCN4	P03069	281 aa		4.07	□□□□□ -1.76
CIT1	YNR001C	SEC53	P07283	254 aa	Known RBP	4.07	□□□□□ -1.76
CIT1	YNR001C	HSF1	P10961	833 aa		4.07	□□□□□ -1.76
CIT1	YNR001C	CDC26	P14724	124 aa		4.07	□□□□□ -1.76
CIT1	YNR001C	BET2	P20133	325 aa		4.07	□□□□□ -1.76
CIT1	YNR001C	RPC53	P25441	422 aa		4.07	□□□□□ -1.76
CIT1	YNR001C	MSP1	P28737	362 aa		4.07	□□□□□ -1.76
CIT1	YNR001C	ORC2	P32833	620 aa		4.07	□□□□□ -1.76
CIT1	YNR001C	YBR225W	P38321	900 aa		4.07	□□□□□ -1.76
CIT1	YNR001C	UTP9	P38882	575 aa	Known RBP	4.07	□□□□□ -1.76
CIT1	YNR001C	POP2	P39008	433 aa		4.07	□□□□□ -1.76
CIT1	YNR001C	YIL108W	P40483	696 aa	Known RBP	4.07	□□□□□ -1.76
CIT1	YNR001C	SET2	P46995	733 aa	Known RBP	4.07	□□□□□ -1.76
CIT1	YNR001C	MTR3	P48240	250 aa	Predicted RBP	4.07	□□□□□ -1.76
CIT1	YNR001C	GPI8	P49018	411 aa		4.07	□□□□□ -1.76
CIT1	YNR001C	YNR061C	P53747	219 aa		4.07	□□□□□ -1.76
CIT1	YNR001C	YPL071C	Q02864	156 aa		4.07	□□□□□ -1.76
CIT1	YNR001C	YMR155W	Q03795	547 aa		4.07	□□□□□ -1.76
CIT1	YNR001C	SNO4	Q04902	237 aa		4.07	□□□□□ -1.76
CIT1	YNR001C	ETT1	Q08421	412 aa	Known RBP	4.07	□□□□□ -1.76
CIT1	YNR001C	HSP33	Q08914	237 aa	Known RBP	4.07	□□□□□ -1.76
CIT1	YNR001C	THI21	Q08975	551 aa		4.07	□□□□□ -1.76
CIT1	YNR001C	HSP32	Q08992	237 aa		4.07	□□□□□ -1.76
CIT1	YNR001C	HAL9	Q12180	1030 aa		4.07	□□□□□ -1.76
CIT1	YNR001C	NPC2	Q12408	173 aa		4.07	□□□□□ -1.76
CIT1	YNR001C	TY3B-I	Q7LHG5	1498 aa	Known RBP	4.07	□□□□□ -1.76
CIT1	YNR001C	TPK1	P06244	397 aa		4.06	□□□□□ -1.76
CIT1	YNR001C	NAT1	P12945	854 aa	Known RBP	4.06	□□□□□ -1.76
CIT1	YNR001C	SIR1	P21691	654 aa		4.06	□□□□□ -1.76
CIT1	YNR001C	SGF29	P25554	259 aa		4.06	□□□□□ -1.76
CIT1	YNR001C	AAD3	P25612	363 aa		4.06	□□□□□ -1.76
CIT1	YNR001C	RPD3	P32561	433 aa		4.06	□□□□□ -1.76
CIT1	YNR001C	APN2	P38207	520 aa		4.06	□□□□□ -1.76
CIT1	YNR001C	YLF2	P38746	405 aa		4.06	□□□□□ -1.76
CIT1	YNR001C	BEM4	P39011	633 aa		4.06	□□□□□ -1.76
CIT1	YNR001C	CCT3	P39077	534 aa	Known RBP	4.06	□□□□□ -1.76
CIT1	YNR001C	YEL025C	P39991	1188 aa		4.06	□□□□□ -1.76
CIT1	YNR001C	RSM25	P40496	264 aa		4.06	□□□□□ -1.76
CIT1	YNR001C	IMA5	P40884	581 aa		4.06	□□□□□ -1.76
CIT1	YNR001C	HOS2	P53096	452 aa	Predicted RBP	4.06	□□□□□ -1.76
CIT1	YNR001C	MDR1	P53258	950 aa		4.06	□□□□□ -1.76
CIT1	YNR001C	BRE5	P53741	515 aa	Known RBP	4.06	□□□□□ -1.76
CIT1	YNR001C	SQS1	P53866	767 aa	Known RBP	4.06	□□□□□ -1.76
CIT1	YNR001C	VPS9	P54787	451 aa		4.06	□□□□□ -1.76
CIT1	YNR001C	TRI1	Q05024	226 aa		4.06	□□□□□ -1.76
CIT1	YNR001C	PSR1	Q07800	427 aa		4.06	□□□□□ -1.76
CIT1	YNR001C	DBP10	Q12389	995 aa	Known RBP	4.06	□□□□□ -1.76
CIT1	YNR001C	YRF1-4	O13559	1382 aa		4.06	□□□□□ -1.76
CIT1	YNR001C	YML133C	Q03099	1374 aa		4.06	□□□□□ -1.76
CIT1	YNR001C	YLL067C	Q07888	1374 aa		4.06	□□□□□ -1.76
CIT1	YNR001C	YLL066C	Q99208	1374 aa		4.06	□□□□□ -1.76
CIT1	YNR001C	RTC1	Q08281	1341 aa		4.06	□□□□□ -1.76
CIT1	YNR001C	PDR12	Q02785	1511 aa		4.05	□□□□□ -1.76
CIT1	YNR001C	ACO1	P19414	778 aa	Known RBP RIP-Chip data	4.05	□□□□□ -1.76	not detected
CIT1	YNR001C	PRE8	P23639	250 aa		4.05	□□□□□ -1.76
CIT1	YNR001C	KAR4	P25583	335 aa		4.05	□□□□□ -1.76
CIT1	YNR001C	PEP3	P27801	918 aa		4.05	□□□□□ -1.76
CIT1	YNR001C	HRR25	P29295	494 aa	Known RBP	4.05	□□□□□ -1.76
CIT1	YNR001C	MF(ALPHA)2	P32435	120 aa		4.05	□□□□□ -1.76
CIT1	YNR001C	CBF2	P32504	956 aa		4.05	□□□□□ -1.76
CIT1	YNR001C	MIC60	P36112	540 aa		4.05	□□□□□ -1.76
CIT1	YNR001C	AKL1	P38080	1108 aa	Known RBP	4.05	□□□□□ -1.76
CIT1	YNR001C	YHR033W	P38690	423 aa		4.05	□□□□□ -1.76
CIT1	YNR001C	MIP6	P38760	659 aa	Known RBP	4.05	□□□□□ -1.76
CIT1	YNR001C	YIL166C	P40445	542 aa		4.05	□□□□□ -1.76
CIT1	YNR001C	YBP2	P53169	641 aa		4.05	□□□□□ -1.76
CIT1	YNR001C	ARP4	P80428	489 aa		4.05	□□□□□ -1.76
CIT1	YNR001C	SLU7	Q02775	382 aa	Known RBP	4.05	□□□□□ -1.76
CIT1	YNR001C	ARP9	Q05123	467 aa		4.05	□□□□□ -1.76
CIT1	YNR001C	YDR341C	Q05506	607 aa	Known RBP	4.05	□□□□□ -1.76
CIT1	YNR001C	YDR286C	Q05530	114 aa		4.05	□□□□□ -1.76
CIT1	YNR001C	UPC2	Q12151	913 aa		4.05	□□□□□ -1.76
CIT1	YNR001C	ATG11	Q12527	1178 aa		4.05	□□□□□ -1.76
CIT1	YNR001C	YOR111W	Q99210	232 aa		4.05	□□□□□ -1.76
CIT1	YNR001C	YLR302C	O13544	120 aa		4.04	□□□□□ -1.76
CIT1	YNR001C	ARG3	P05150	338 aa		4.04	□□□□□ -1.76
CIT1	YNR001C	MET17	P06106	444 aa		4.04	□□□□□ -1.76
CIT1	YNR001C	PMS1	P14242	873 aa		4.04	□□□□□ -1.76
CIT1	YNR001C	RIT1	P23796	513 aa		4.04	□□□□□ -1.76
CIT1	YNR001C	IMG2	P25642	146 aa	Predicted RBP	4.04	□□□□□ -1.76
CIT1	YNR001C	STE14	P32584	239 aa		4.04	□□□□□ -1.76
CIT1	YNR001C	SAC6	P32599	642 aa	Known RBP	4.04	□□□□□ -1.76
CIT1	YNR001C	CBF5	P33322	483 aa	Known RBP RIP-Chip data	4.04	□□□□□ -1.76	not detected
CIT1	YNR001C	YBL029W	P38201	376 aa		4.04	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 119.9 ms