RNA–Protein interactions for RNA: YNL224C

SQS1, Transcript of Protein that stimulates the ATPase and helicase activities of Prp43p, yeast

Gene SQS1, Length 2,304 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SQS1	YNL224C	UTR1	P21373	530 aa		3.37	□□□□□ -1.87
SQS1	YNL224C	PEX1	P24004	1043 aa		3.37	□□□□□ -1.87
SQS1	YNL224C	RER1	P25560	188 aa		3.37	□□□□□ -1.87
SQS1	YNL224C	ATP7	P30902	174 aa		3.37	□□□□□ -1.87
SQS1	YNL224C	MEI5	P32489	222 aa		3.37	□□□□□ -1.87
SQS1	YNL224C	SPC29	P33419	253 aa		3.37	□□□□□ -1.87
SQS1	YNL224C	MAE1	P36013	669 aa	Known RBP	3.37	□□□□□ -1.87
SQS1	YNL224C	YKR015C	P36111	568 aa		3.37	□□□□□ -1.87
SQS1	YNL224C	MCM7	P38132	845 aa		3.37	□□□□□ -1.87
SQS1	YNL224C	PCS60	P38137	543 aa	Known RBP RIP-Chip data	3.37	□□□□□ -1.87	not detected
SQS1	YNL224C	PPS1	P38148	807 aa		3.37	□□□□□ -1.87
SQS1	YNL224C	YBL036C	P38197	257 aa		3.37	□□□□□ -1.87
SQS1	YNL224C	MTG2	P38860	518 aa		3.37	□□□□□ -1.87
SQS1	YNL224C	PIG2	P40187	538 aa		3.37	□□□□□ -1.87
SQS1	YNL224C	KHA1	P40309	873 aa		3.37	□□□□□ -1.87
SQS1	YNL224C	MPS3	P47069	682 aa		3.37	□□□□□ -1.87
SQS1	YNL224C	GCV2	P49095	1034 aa		3.37	□□□□□ -1.87
SQS1	YNL224C	IMD4	P50094	524 aa	Known RBP	3.37	□□□□□ -1.87
SQS1	YNL224C	KAP114	P53067	1004 aa		3.37	□□□□□ -1.87
SQS1	YNL224C	TYW3	P53177	273 aa		3.37	□□□□□ -1.87
SQS1	YNL224C	MRPL50	P53724	139 aa		3.37	□□□□□ -1.87
SQS1	YNL224C	NAF1	P53919	492 aa	Known RBP	3.37	□□□□□ -1.87
SQS1	YNL224C	CUS1	Q02554	436 aa	Predicted RBP	3.37	□□□□□ -1.87
SQS1	YNL224C	SLU7	Q02775	382 aa	Known RBP	3.37	□□□□□ -1.87
SQS1	YNL224C	YPL071C	Q02864	156 aa		3.37	□□□□□ -1.87
SQS1	YNL224C	UME1	Q03010	460 aa		3.37	□□□□□ -1.87
SQS1	YNL224C	YDR444W	Q04093	687 aa		3.37	□□□□□ -1.87
SQS1	YNL224C	COA4	Q05809	96 aa		3.37	□□□□□ -1.87
SQS1	YNL224C	DXO1	Q06349	442 aa		3.37	□□□□□ -1.87
SQS1	YNL224C	YDL114W	Q07530	308 aa		3.37	□□□□□ -1.87
SQS1	YNL224C	HBT1	Q07653	1046 aa	Known RBP	3.37	□□□□□ -1.87
SQS1	YNL224C	NGL1	Q08213	363 aa	Known RBP	3.37	□□□□□ -1.87
SQS1	YNL224C	VHS3	Q08438	674 aa		3.37	□□□□□ -1.87
SQS1	YNL224C	OSW2	Q12202	724 aa		3.37	□□□□□ -1.87
SQS1	YNL224C	HOS1	Q12214	470 aa		3.37	□□□□□ -1.87
SQS1	YNL224C	VAM3	Q12241	283 aa		3.37	□□□□□ -1.87
SQS1	YNL224C	NTO1	Q12311	748 aa		3.37	□□□□□ -1.87
SQS1	YNL224C	COX6	P00427	148 aa		3.37	□□□□□ -1.87
SQS1	YNL224C	CAN1	P04817	590 aa		3.37	□□□□□ -1.87
SQS1	YNL224C	RPL35A	P0CX84	120 aa	Known RBP	3.37	□□□□□ -1.87
SQS1	YNL224C	RPL35B	P0CX85	120 aa	Known RBP	3.37	□□□□□ -1.87
SQS1	YNL224C	ABF1	P14164	731 aa		3.37	□□□□□ -1.87
SQS1	YNL224C	GFA1	P14742	717 aa	Known RBP	3.37	□□□□□ -1.87
SQS1	YNL224C	RVS161	P25343	265 aa	Known RBP	3.37	□□□□□ -1.87
SQS1	YNL224C	CMK1	P27466	446 aa	Known RBP	3.37	□□□□□ -1.87
SQS1	YNL224C	HXT3	P32466	567 aa	Known RBP	3.37	□□□□□ -1.87
SQS1	YNL224C	ERG1	P32476	496 aa	Known RBP	3.37	□□□□□ -1.87
SQS1	YNL224C	MKK2	P32491	506 aa		3.37	□□□□□ -1.87
SQS1	YNL224C	PRP19	P32523	503 aa	Known RBP	3.37	□□□□□ -1.87
SQS1	YNL224C	HMT1	P38074	348 aa		3.37	□□□□□ -1.87
SQS1	YNL224C	ADH5	P38113	351 aa	Known RBP	3.37	□□□□□ -1.87
SQS1	YNL224C	AIM3	P38266	947 aa	Known RBP	3.37	□□□□□ -1.87
SQS1	YNL224C	GRE3	P38715	327 aa	Known RBP RIP-Chip data	3.37	□□□□□ -1.87	not detected
SQS1	YNL224C	LNP1	P38878	278 aa		3.37	□□□□□ -1.87
SQS1	YNL224C	SSO2	P39926	295 aa		3.37	□□□□□ -1.87
SQS1	YNL224C	SPF1	P39986	1215 aa	Known RBP	3.37	□□□□□ -1.87
SQS1	YNL224C	HIS6	P40545	261 aa		3.37	□□□□□ -1.87
SQS1	YNL224C	LCB2	P40970	561 aa		3.37	□□□□□ -1.87
SQS1	YNL224C	FIG4	P42837	879 aa		3.37	□□□□□ -1.87
SQS1	YNL224C	HFM1	P51979	1187 aa		3.37	□□□□□ -1.87
SQS1	YNL224C	PRM1	P53835	661 aa		3.37	□□□□□ -1.87
SQS1	YNL224C	CNM67	P53865	581 aa	Known RBP	3.37	□□□□□ -1.87
SQS1	YNL224C	SNP1	Q00916	300 aa	Predicted RBP	3.37	□□□□□ -1.87
SQS1	YNL224C	CIK1	Q01649	594 aa		3.37	□□□□□ -1.87
SQS1	YNL224C	ECM23	Q02710	187 aa		3.37	□□□□□ -1.87
SQS1	YNL224C	SKI8	Q02793	397 aa	Predicted RBP	3.37	□□□□□ -1.87
SQS1	YNL224C	KAP120	Q02932	1032 aa		3.37	□□□□□ -1.87
SQS1	YNL224C	GYL1	Q04322	720 aa		3.37	□□□□□ -1.87
SQS1	YNL224C	RCO1	Q04779	684 aa		3.37	□□□□□ -1.87
SQS1	YNL224C	DCR2	Q05924	578 aa		3.37	□□□□□ -1.87
SQS1	YNL224C	YPR084W	Q06821	456 aa		3.37	□□□□□ -1.87
SQS1	YNL224C	YLR001C	Q07895	862 aa		3.37	□□□□□ -1.87
SQS1	YNL224C	REX4	Q08237	289 aa		3.37	□□□□□ -1.87
SQS1	YNL224C	BBP1	Q12365	385 aa		3.37	□□□□□ -1.87
SQS1	YNL224C	ECM5	Q03214	1411 aa		3.37	□□□□□ -1.87
SQS1	YNL224C	PHO4	P07270	312 aa	Known RBP	3.36	□□□□□ -1.87
SQS1	YNL224C	GPI10	P30777	616 aa		3.36	□□□□□ -1.87
SQS1	YNL224C	IRE1	P32361	1115 aa		3.36	□□□□□ -1.87
SQS1	YNL224C	SRP101	P32916	621 aa		3.36	□□□□□ -1.87
SQS1	YNL224C	NIC96	P34077	839 aa		3.36	□□□□□ -1.87
SQS1	YNL224C	NCL1	P38205	684 aa	Known RBP	3.36	□□□□□ -1.87
SQS1	YNL224C	RFT1	P38206	574 aa	Predicted RBP	3.36	□□□□□ -1.87
SQS1	YNL224C	SSH1	P38353	490 aa	Known RBP	3.36	□□□□□ -1.87
SQS1	YNL224C	VMA22	P38784	181 aa		3.36	□□□□□ -1.87
SQS1	YNL224C	LSM12	P38828	187 aa	Known RBP	3.36	□□□□□ -1.87
SQS1	YNL224C	DPH1	P40487	425 aa	Known RBP	3.36	□□□□□ -1.87
SQS1	YNL224C	VHR1	P40522	640 aa		3.36	□□□□□ -1.87
SQS1	YNL224C	PAN2	P53010	1115 aa	Predicted RBP	3.36	□□□□□ -1.87
SQS1	YNL224C	SLX9	P53251	210 aa	Predicted RBP	3.36	□□□□□ -1.87
SQS1	YNL224C	TRS120	Q04183	1289 aa		3.36	□□□□□ -1.87
SQS1	YNL224C	HFD1	Q04458	532 aa		3.36	□□□□□ -1.87
SQS1	YNL224C	ISR1	Q06098	443 aa	Known RBP	3.36	□□□□□ -1.87
SQS1	YNL224C	MLC2	Q06580	163 aa		3.36	□□□□□ -1.87
SQS1	YNL224C	RRP12	Q12754	1228 aa	Known RBP	3.36	□□□□□ -1.87
SQS1	YNL224C	TSC11	P40061	1430 aa		3.36	□□□□□ -1.87
SQS1	YNL224C	CBP2	P03874	630 aa	Predicted RBP	3.36	□□□□□ -1.87
SQS1	YNL224C	PHR1	P05066	565 aa	Known RBP RIP-Chip data	3.36	□□□□□ -1.87	not detected
SQS1	YNL224C	PDC1	P06169	563 aa	Known RBP	3.36	□□□□□ -1.87
SQS1	YNL224C	URA4	P20051	364 aa		3.36	□□□□□ -1.87
SQS1	YNL224C	CKI1	P20485	582 aa		3.36	□□□□□ -1.87

Retrieved 100 of 5,963 RNA–protein pairs in 20.5 ms