RNA–Protein interactions for RNA: YNL022C

RCM1, Transcript of rRNA m5C methyltransferase, yeast

Gene RCM1, Length 1,473 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RCM1	YNL022C	POL3	P15436	1097 aa		4.75	□□□□□ -1.65
RCM1	YNL022C	AAC3	P18238	307 aa		4.75	□□□□□ -1.65
RCM1	YNL022C	FUR1	P18562	216 aa	Known RBP	4.75	□□□□□ -1.65
RCM1	YNL022C	MCM3	P24279	971 aa	Known RBP	4.75	□□□□□ -1.65
RCM1	YNL022C	PXA2	P34230	853 aa		4.75	□□□□□ -1.65
RCM1	YNL022C	LST4	P34239	828 aa		4.75	□□□□□ -1.65
RCM1	YNL022C	CTF13	P35203	478 aa		4.75	□□□□□ -1.65
RCM1	YNL022C	YHR033W	P38690	423 aa		4.75	□□□□□ -1.65
RCM1	YNL022C	MSS4	P38994	779 aa		4.75	□□□□□ -1.65
RCM1	YNL022C	NOP16	P40007	231 aa	Known RBP	4.75	□□□□□ -1.65
RCM1	YNL022C	PUG1	P40100	303 aa		4.75	□□□□□ -1.65
RCM1	YNL022C	AVT1	P47082	602 aa		4.75	□□□□□ -1.65
RCM1	YNL022C	PUS4	P48567	403 aa	Known RBP	4.75	□□□□□ -1.65
RCM1	YNL022C	MNN10	P50108	393 aa	Known RBP	4.75	□□□□□ -1.65
RCM1	YNL022C	RBG2	P53295	368 aa	Known RBP	4.75	□□□□□ -1.65
RCM1	YNL022C	CPR6	P53691	371 aa	Known RBP	4.75	□□□□□ -1.65
RCM1	YNL022C	REC102	Q02721	264 aa		4.75	□□□□□ -1.65
RCM1	YNL022C	GSF2	Q04697	403 aa	Known RBP	4.75	□□□□□ -1.65
RCM1	YNL022C	TMA10	Q06177	86 aa		4.75	□□□□□ -1.65
RCM1	YNL022C	YCG1	Q06680	1035 aa		4.75	□□□□□ -1.65
RCM1	YNL022C	VHS3	Q08438	674 aa		4.75	□□□□□ -1.65
RCM1	YNL022C	SGO1	Q08490	590 aa		4.75	□□□□□ -1.65
RCM1	YNL022C	VPS5	Q92331	675 aa		4.75	□□□□□ -1.65
RCM1	YNL022C	TY1B-A	O13527	1196 aa	Known RBP	4.74	□□□□□ -1.65
RCM1	YNL022C	ACO1	P19414	778 aa	Known RBP RIP-Chip data	4.74	□□□□□ -1.65	not detected
RCM1	YNL022C	UBC1	P21734	215 aa	Known RBP	4.74	□□□□□ -1.65
RCM1	YNL022C	CAD1	P24813	409 aa	Known RBP	4.74	□□□□□ -1.65
RCM1	YNL022C	GID8	P40208	455 aa		4.74	□□□□□ -1.65
RCM1	YNL022C	IMA5	P40884	581 aa		4.74	□□□□□ -1.65
RCM1	YNL022C	NPA3	P47122	385 aa		4.74	□□□□□ -1.65
RCM1	YNL022C	SGM1	P47166	707 aa		4.74	□□□□□ -1.65
RCM1	YNL022C	MDR1	P53258	950 aa		4.74	□□□□□ -1.65
RCM1	YNL022C	SQS1	P53866	767 aa	Known RBP	4.74	□□□□□ -1.65
RCM1	YNL022C	LEE1	Q02799	301 aa	Known RBP	4.74	□□□□□ -1.65
RCM1	YNL022C	NRG1	Q03125	231 aa		4.74	□□□□□ -1.65
RCM1	YNL022C	VID22	Q05934	901 aa		4.74	□□□□□ -1.65
RCM1	YNL022C	SDH5	Q08230	162 aa		4.74	□□□□□ -1.65
RCM1	YNL022C	TAH18	Q12181	623 aa		4.74	□□□□□ -1.65
RCM1	YNL022C	HOS1	Q12214	470 aa		4.74	□□□□□ -1.65
RCM1	YNL022C	ATG11	Q12527	1178 aa		4.74	□□□□□ -1.65
RCM1	YNL022C	FAS2	P19097	1887 aa	Known RBP	4.73	□□□□□ -1.65
RCM1	YNL022C	RNR2	P09938	399 aa	Known RBP	4.73	□□□□□ -1.65
RCM1	YNL022C	PCK1	P10963	549 aa		4.73	□□□□□ -1.65
RCM1	YNL022C	CAF20	P12962	161 aa	Known RBP	4.73	□□□□□ -1.65
RCM1	YNL022C	NCP1	P16603	691 aa	Known RBP	4.73	□□□□□ -1.65
RCM1	YNL022C	PRP4	P20053	465 aa	Known RBP	4.73	□□□□□ -1.65
RCM1	YNL022C	CMK1	P27466	446 aa	Known RBP	4.73	□□□□□ -1.65
RCM1	YNL022C	MF(ALPHA)2	P32435	120 aa		4.73	□□□□□ -1.65
RCM1	YNL022C	PEX5	P35056	612 aa		4.73	□□□□□ -1.65
RCM1	YNL022C	NUP120	P35729	1037 aa		4.73	□□□□□ -1.65
RCM1	YNL022C	TEF4	P36008	412 aa	Known RBP	4.73	□□□□□ -1.65
RCM1	YNL022C	BCD1	P38772	366 aa		4.73	□□□□□ -1.65
RCM1	YNL022C	AXL2	P38928	823 aa		4.73	□□□□□ -1.65
RCM1	YNL022C	ARG5,6	Q01217	863 aa		4.73	□□□□□ -1.65
RCM1	YNL022C	SLU7	Q02775	382 aa	Known RBP	4.73	□□□□□ -1.65
RCM1	YNL022C	ARA2	Q04212	335 aa		4.73	□□□□□ -1.65
RCM1	YNL022C	GAD1	Q04792	585 aa		4.73	□□□□□ -1.65
RCM1	YNL022C	YPS7	Q06325	596 aa		4.73	□□□□□ -1.65
RCM1	YNL022C	CSR1	Q06705	408 aa	Known RBP	4.73	□□□□□ -1.65
RCM1	YNL022C	THI3	Q07471	609 aa		4.73	□□□□□ -1.65
RCM1	YNL022C	IWR1	Q07532	353 aa	Predicted RBP	4.73	□□□□□ -1.65
RCM1	YNL022C	LSP1	Q12230	341 aa	Known RBP	4.73	□□□□□ -1.65
RCM1	YNL022C	DBP10	Q12389	995 aa	Known RBP	4.73	□□□□□ -1.65
RCM1	YNL022C	HSH49	Q99181	213 aa	Predicted RBP	4.73	□□□□□ -1.65
RCM1	YNL022C	POM152	P39685	1337 aa		4.72	□□□□□ -1.65
RCM1	YNL022C	HKR1	P41809	1802 aa		4.72	□□□□□ -1.65
RCM1	YNL022C	PYC1	P11154	1178 aa	Known RBP	4.72	□□□□□ -1.65
RCM1	YNL022C	GUK1	P15454	187 aa	Known RBP	4.72	□□□□□ -1.65
RCM1	YNL022C	RNQ1	P25367	405 aa		4.72	□□□□□ -1.65
RCM1	YNL022C	BRF1	P29056	596 aa		4.72	□□□□□ -1.65
RCM1	YNL022C	MGM1	P32266	881 aa		4.72	□□□□□ -1.65
RCM1	YNL022C	DCG1	P32460	244 aa		4.72	□□□□□ -1.65
RCM1	YNL022C	CNS1	P33313	385 aa		4.72	□□□□□ -1.65
RCM1	YNL022C	YKL050C	P35736	922 aa		4.72	□□□□□ -1.65
RCM1	YNL022C	YLF2	P38746	405 aa		4.72	□□□□□ -1.65
RCM1	YNL022C	STT3	P39007	718 aa	Known RBP	4.72	□□□□□ -1.65
RCM1	YNL022C	CCT3	P39077	534 aa	Known RBP	4.72	□□□□□ -1.65
RCM1	YNL022C	YMR147W	P40218	223 aa	Known RBP	4.72	□□□□□ -1.65
RCM1	YNL022C	KHA1	P40309	873 aa		4.72	□□□□□ -1.65
RCM1	YNL022C	MCM6	P53091	1017 aa	Known RBP	4.72	□□□□□ -1.65
RCM1	YNL022C	HOS2	P53096	452 aa	Predicted RBP	4.72	□□□□□ -1.65
RCM1	YNL022C	RSC1	P53236	928 aa		4.72	□□□□□ -1.65
RCM1	YNL022C	MRPL19	P53875	158 aa		4.72	□□□□□ -1.65
RCM1	YNL022C	CLU1	Q03690	1277 aa	Known RBP	4.72	□□□□□ -1.65
RCM1	YNL022C	PPN1	Q04119	674 aa		4.72	□□□□□ -1.65
RCM1	YNL022C	VPS20	Q04272	221 aa		4.72	□□□□□ -1.65
RCM1	YNL022C	YLR287C	Q05881	355 aa		4.72	□□□□□ -1.65
RCM1	YNL022C	YLR352W	Q06479	807 aa		4.72	□□□□□ -1.65
RCM1	YNL022C	RTK1	Q12100	620 aa	Predicted RBP	4.72	□□□□□ -1.65
RCM1	YNL022C	TRP4	P07285	380 aa	Predicted RBP	4.71	□□□□□ -1.66
RCM1	YNL022C	MET3	P08536	511 aa		4.71	□□□□□ -1.66
RCM1	YNL022C	HOM3	P10869	527 aa		4.71	□□□□□ -1.66
RCM1	YNL022C	CLC1	P17891	233 aa		4.71	□□□□□ -1.66
RCM1	YNL022C	ADE2	P21264	571 aa	Known RBP	4.71	□□□□□ -1.66
RCM1	YNL022C	ROX1	P25042	368 aa		4.71	□□□□□ -1.66
RCM1	YNL022C	CDC60	P26637	1090 aa	Known RBP	4.71	□□□□□ -1.66
RCM1	YNL022C	MSP1	P28737	362 aa		4.71	□□□□□ -1.66
RCM1	YNL022C	PET127	P32606	800 aa		4.71	□□□□□ -1.66
RCM1	YNL022C	FRD1	P32614	470 aa	Known RBP	4.71	□□□□□ -1.66
RCM1	YNL022C	SAS3	P34218	831 aa		4.71	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 37.7 ms