RNA–Protein interactions for RNA: YNL021W

HDA1, Transcript of Putative catalytic subunit of a class II histone deacetylase complex, yeastyeast

Gene HDA1, Length 2,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HDA1YNL021W ECM22Q05958 814 aaPredicted RBP7.45□□□□□ -1.22
HDA1YNL021W ICL2Q12031 575 aa7.45□□□□□ -1.22
HDA1YNL021W NMD4Q12129 218 aa7.45□□□□□ -1.22
HDA1YNL021W COX17Q12287 69 aa7.45□□□□□ -1.22
HDA1YNL021W SES1P07284 462 aaKnown RBP7.45□□□□□ -1.22
HDA1YNL021W LCB1P25045 558 aaKnown RBP7.45□□□□□ -1.22
HDA1YNL021W STE50P25344 346 aa7.45□□□□□ -1.22
HDA1YNL021W MDL1P33310 695 aa7.45□□□□□ -1.22
HDA1YNL021W GPT2P36148 743 aa7.45□□□□□ -1.22
HDA1YNL021W YEL057CP39983 233 aa7.45□□□□□ -1.22
HDA1YNL021W RAI1P53063 387 aaKnown RBP7.45□□□□□ -1.22
HDA1YNL021W ADE12P80210 433 aaKnown RBP7.45□□□□□ -1.22
HDA1YNL021W YMR265CQ03508 461 aaKnown RBP7.45□□□□□ -1.22
HDA1YNL021W CSI1Q04368 295 aa7.45□□□□□ -1.22
HDA1YNL021W CTI6Q08923 506 aa7.45□□□□□ -1.22
HDA1YNL021W OSW2Q12202 724 aa7.45□□□□□ -1.22
HDA1YNL021W NFI1Q12216 726 aa7.45□□□□□ -1.22
HDA1YNL021W ZRT2Q12436 422 aa7.45□□□□□ -1.22
HDA1YNL021W ISN1Q99312 450 aa7.45□□□□□ -1.22
HDA1YNL021W TUB2P02557 457 aaKnown RBP7.44□□□□□ -1.22
HDA1YNL021W KAR3P17119 729 aa7.44□□□□□ -1.22
HDA1YNL021W POT1P27796 417 aaKnown RBP RIP-Chip data7.44□□□□□ -1.22not detected
HDA1YNL021W ENT4Q07872 247 aa7.44□□□□□ -1.22
HDA1YNL021W GET3Q12154 354 aaKnown RBP7.44□□□□□ -1.22
HDA1YNL021W CNS1P33313 385 aa7.43□□□□□ -1.22
HDA1YNL021W GCS1P35197 352 aa7.43□□□□□ -1.22
HDA1YNL021W LCB2P40970 561 aa7.43□□□□□ -1.22
HDA1YNL021W ENP2P48234 707 aaKnown RBP7.43□□□□□ -1.22
HDA1YNL021W VPS9P54787 451 aa7.43□□□□□ -1.22
HDA1YNL021W OPT2Q06593 877 aa7.43□□□□□ -1.22
HDA1YNL021W SYT1Q06836 1226 aa7.43□□□□□ -1.22
HDA1YNL021W ALE1Q08548 619 aa7.43□□□□□ -1.22
HDA1YNL021W TY1A-BLQ12266 440 aa7.43□□□□□ -1.22
HDA1YNL021W ISA2Q12425 185 aa7.43□□□□□ -1.22
HDA1YNL021W RPS19AP07280 144 aaKnown RBP7.43□□□□□ -1.22
HDA1YNL021W RPS19BP07281 144 aaPredicted RBP7.43□□□□□ -1.22
HDA1YNL021W VMA2P16140 517 aaKnown RBP7.43□□□□□ -1.22
HDA1YNL021W THR1P17423 357 aaKnown RBP7.43□□□□□ -1.22
HDA1YNL021W YCK1P23291 538 aa7.43□□□□□ -1.22
HDA1YNL021W POL4P25615 582 aa7.43□□□□□ -1.22
HDA1YNL021W CWH43P25618 953 aa7.43□□□□□ -1.22
HDA1YNL021W ARC1P46672 376 aaKnown RBP7.43□□□□□ -1.22
HDA1YNL021W EXG2P52911 562 aa7.43□□□□□ -1.22
HDA1YNL021W YBP2P53169 641 aa7.43□□□□□ -1.22
HDA1YNL021W TGL5Q12043 749 aa7.43□□□□□ -1.22
HDA1YNL021W SKM1Q12469 655 aa7.43□□□□□ -1.22
HDA1YNL021W PRP22P24384 1145 aaKnown RBP7.42□□□□□ -1.22
HDA1YNL021W CAP1P28495 268 aaKnown RBP7.42□□□□□ -1.22
HDA1YNL021W CDS1P38221 457 aa7.42□□□□□ -1.22
HDA1YNL021W YNG2P38806 282 aaKnown RBP7.42□□□□□ -1.22
HDA1YNL021W UTP9P38882 575 aaKnown RBP7.42□□□□□ -1.22
HDA1YNL021W YIL108WP40483 696 aaKnown RBP7.42□□□□□ -1.22
HDA1YNL021W SEC28P40509 296 aaKnown RBP7.42□□□□□ -1.22
HDA1YNL021W YDL183CP48569 320 aa7.42□□□□□ -1.22
HDA1YNL021W CRD1Q07560 283 aa7.42□□□□□ -1.22
HDA1YNL021W PUF3Q07807 879 aaKnown RBP RIP-Chip data7.42□□□□□ -1.22not detected
HDA1YNL021W EFT1P32324 842 aaKnown RBP7.42□□□□□ -1.22
HDA1YNL021W FSH1P38777 243 aaKnown RBP7.42□□□□□ -1.22
HDA1YNL021W UBP7P40453 1071 aa7.42□□□□□ -1.22
HDA1YNL021W TIM11P81449 96 aaPredicted RBP7.42□□□□□ -1.22
HDA1YNL021W PEX25Q02969 394 aa7.42□□□□□ -1.22
HDA1YNL021W SUL2Q12325 893 aa7.42□□□□□ -1.22
HDA1YNL021W RIB2Q12362 591 aaKnown RBP7.42□□□□□ -1.22
HDA1YNL021W PDH1Q12428 516 aaKnown RBP7.42□□□□□ -1.22
HDA1YNL021W RRP36Q12481 300 aaPredicted RBP7.42□□□□□ -1.22
HDA1YNL021W CAF20P12962 161 aaKnown RBP7.41□□□□□ -1.22
HDA1YNL021W LRG1P35688 1017 aa7.41□□□□□ -1.22
HDA1YNL021W SRO77P38163 1010 aa7.41□□□□□ -1.22
HDA1YNL021W UBP13P38187 747 aa7.41□□□□□ -1.22
HDA1YNL021W DOT5P40553 215 aa7.41□□□□□ -1.22
HDA1YNL021W NAS2P40555 220 aa7.41□□□□□ -1.22
HDA1YNL021W NNF2P53253 936 aa7.41□□□□□ -1.22
HDA1YNL021W NCS2P53923 493 aaPredicted RBP7.41□□□□□ -1.22
HDA1YNL021W MAP1Q01662 387 aaKnown RBP RIP-Chip data7.41□□□□□ -1.22not detected
HDA1YNL021W ERB1Q04660 807 aaKnown RBP7.41□□□□□ -1.22
HDA1YNL021W SVS1Q12254 260 aa7.41□□□□□ -1.22
HDA1YNL021W PDC5P16467 563 aaKnown RBP7.4□□□□□ -1.22
HDA1YNL021W REC107P21651 314 aa7.4□□□□□ -1.22
HDA1YNL021W TRX1P22217 103 aaKnown RBP7.4□□□□□ -1.22
HDA1YNL021W SSY5P47002 699 aa7.4□□□□□ -1.22
HDA1YNL021W YJL055WP47044 245 aa7.4□□□□□ -1.22
HDA1YNL021W TAF4P50105 388 aa7.4□□□□□ -1.22
HDA1YNL021W PSP2P50109 593 aaKnown RBP7.4□□□□□ -1.22
HDA1YNL021W COG1P53079 417 aa7.4□□□□□ -1.22
HDA1YNL021W RPT6Q01939 405 aaKnown RBP7.4□□□□□ -1.22
HDA1YNL021W AIM32Q04689 311 aa7.4□□□□□ -1.22
HDA1YNL021W YBR126W-AQ8TGU7 68 aa7.4□□□□□ -1.22
HDA1YNL021W SEC53P07283 254 aaKnown RBP7.4□□□□□ -1.23
HDA1YNL021W PRE4P30657 266 aa7.4□□□□□ -1.23
HDA1YNL021W PUP2P32379 260 aa7.4□□□□□ -1.23
HDA1YNL021W RAD24P32641 659 aa7.4□□□□□ -1.23
HDA1YNL021W MRPL36P36531 177 aa7.4□□□□□ -1.23
HDA1YNL021W APN2P38207 520 aa7.4□□□□□ -1.23
HDA1YNL021W YHR033WP38690 423 aa7.4□□□□□ -1.23
HDA1YNL021W CIK1Q01649 594 aa7.4□□□□□ -1.23
HDA1YNL021W GCR2Q01722 534 aa7.4□□□□□ -1.23
HDA1YNL021W OAZ1Q02803 292 aa7.4□□□□□ -1.23
HDA1YNL021W RAD30Q04049 632 aa7.4□□□□□ -1.23
HDA1YNL021W ADY4Q05955 493 aa7.4□□□□□ -1.23
HDA1YNL021W FRE6Q12473 712 aa7.4□□□□□ -1.23
Retrieved 100 of 5,963 RNA–protein pairs in 28.4 ms