RNA–Protein interactions for RNA: YLR378C

SEC61, Transcript of Conserved ER protein translocation channel, yeastyeast

Gene SEC61, Length 1,443 nt, Biotype protein coding, Subcellular localisation Mitochondria, Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC61YLR378C VAC8P39968 578 aa9.36□□□□□ -0.91
SEC61YLR378C MRX1P40050 688 aa9.36□□□□□ -0.91
SEC61YLR378C FAP1P53971 965 aa9.36□□□□□ -0.91
SEC61YLR378C SPO71Q03868 1245 aa9.36□□□□□ -0.91
SEC61YLR378C LDB17Q12342 491 aa9.36□□□□□ -0.91
SEC61YLR378C NDJ1Q12366 352 aa9.36□□□□□ -0.91
SEC61YLR378C APE1P14904 514 aa9.35□□□□□ -0.91
SEC61YLR378C PDE1P22434 369 aa9.35□□□□□ -0.91
SEC61YLR378C MRE11P32829 692 aa9.35□□□□□ -0.91
SEC61YLR378C NUP60P39705 539 aa9.35□□□□□ -0.91
SEC61YLR378C SSP120P39931 234 aaKnown RBP9.35□□□□□ -0.91
SEC61YLR378C FAF1P40546 346 aaPredicted RBP9.35□□□□□ -0.91
SEC61YLR378C YIR016WP40572 265 aa9.35□□□□□ -0.91
SEC61YLR378C TAF6P53040 516 aa9.35□□□□□ -0.91
SEC61YLR378C NRD1P53617 575 aaKnown RBP RIP-Chip data9.35□□□□□ -0.91not detected
SEC61YLR378C BIO4P53630 237 aa9.35□□□□□ -0.91
SEC61YLR378C DOS2P54858 310 aa9.35□□□□□ -0.91
SEC61YLR378C MET14Q02196 202 aa9.35□□□□□ -0.91
SEC61YLR378C YMR102CQ03177 834 aa9.35□□□□□ -0.91
SEC61YLR378C ADI1Q03677 179 aa9.35□□□□□ -0.91
SEC61YLR378C SWC7Q06707 132 aa9.35□□□□□ -0.91
SEC61YLR378C NOB1Q08444 459 aaKnown RBP9.35□□□□□ -0.91
SEC61YLR378C IDI1P15496 288 aa9.34□□□□□ -0.91
SEC61YLR378C AAD3P25612 363 aa9.34□□□□□ -0.91
SEC61YLR378C PSE1P32337 1089 aaKnown RBP9.34□□□□□ -0.91
SEC61YLR378C KAP104P38217 918 aaKnown RBP9.34□□□□□ -0.91
SEC61YLR378C YBR062CP38239 180 aa9.34□□□□□ -0.91
SEC61YLR378C CRP1P38845 465 aaKnown RBP9.34□□□□□ -0.91
SEC61YLR378C YJL206CP39529 758 aa9.34□□□□□ -0.91
SEC61YLR378C FMP10P40098 244 aa9.34□□□□□ -0.91
SEC61YLR378C UFE1P41834 346 aa9.34□□□□□ -0.91
SEC61YLR378C BST1P43571 1029 aa9.34□□□□□ -0.91
SEC61YLR378C SNG1P46950 547 aa9.34□□□□□ -0.91
SEC61YLR378C UTP8P53276 713 aaKnown RBP9.34□□□□□ -0.91
SEC61YLR378C HST2P53686 357 aa9.34□□□□□ -0.91
SEC61YLR378C SHE9Q04172 456 aa9.34□□□□□ -0.91
SEC61YLR378C YLR257WQ06146 321 aaKnown RBP9.34□□□□□ -0.91
SEC61YLR378C PIB1Q06651 286 aa9.34□□□□□ -0.91
SEC61YLR378C LCB4Q12246 624 aa9.34□□□□□ -0.91
SEC61YLR378C AFI1Q99222 893 aa9.34□□□□□ -0.91
SEC61YLR378C ENO2P00925 437 aaKnown RBP9.33□□□□□ -0.92
SEC61YLR378C MIS1P09440 975 aaKnown RBP9.33□□□□□ -0.92
SEC61YLR378C HEM3P28789 327 aa9.33□□□□□ -0.92
SEC61YLR378C RAD16P31244 790 aa9.33□□□□□ -0.92
SEC61YLR378C ADD66P36040 267 aa9.33□□□□□ -0.92
SEC61YLR378C YBR032WP38223 100 aa9.33□□□□□ -0.92
SEC61YLR378C SRP68P38687 599 aaKnown RBP9.33□□□□□ -0.92
SEC61YLR378C TFG1P41895 735 aaPredicted RBP9.33□□□□□ -0.92
SEC61YLR378C YFL012WP43580 148 aa9.33□□□□□ -0.92
SEC61YLR378C DLD2P46681 530 aaKnown RBP9.33□□□□□ -0.92
SEC61YLR378C TEP1P53916 434 aa9.33□□□□□ -0.92
SEC61YLR378C CDC14Q00684 551 aa9.33□□□□□ -0.92
SEC61YLR378C BUD22Q04347 519 aaKnown RBP9.33□□□□□ -0.92
SEC61YLR378C YSH1Q06224 779 aaPredicted RBP9.33□□□□□ -0.92
SEC61YLR378C CMS1Q07897 291 aaKnown RBP9.33□□□□□ -0.92
SEC61YLR378C HIP1P06775 603 aa9.32□□□□□ -0.92
SEC61YLR378C RIM1P32445 135 aaKnown RBP9.32□□□□□ -0.92
SEC61YLR378C NIP1P32497 812 aaKnown RBP9.32□□□□□ -0.92
SEC61YLR378C SMI1P32566 505 aa9.32□□□□□ -0.92
SEC61YLR378C RDH54P38086 958 aa9.32□□□□□ -0.92
SEC61YLR378C HEK2P38199 381 aaKnown RBP RIP-Chip data9.32□□□□□ -0.92 RIP-Chip
SEC61YLR378C OAF1P39720 1047 aaPredicted RBP9.32□□□□□ -0.92
SEC61YLR378C PRP24P49960 444 aaKnown RBP9.32□□□□□ -0.92
SEC61YLR378C TAN1P53072 289 aaPredicted RBP9.32□□□□□ -0.92
SEC61YLR378C SIW14P53965 281 aa9.32□□□□□ -0.92
SEC61YLR378C UBX4P54730 416 aa9.32□□□□□ -0.92
SEC61YLR378C PIR3Q03180 325 aa9.32□□□□□ -0.92
SEC61YLR378C PGC1Q08959 321 aa9.32□□□□□ -0.92
SEC61YLR378C LPX1Q12405 387 aaKnown RBP9.32□□□□□ -0.92
SEC61YLR378C MTF1P14908 341 aaKnown RBP9.31□□□□□ -0.92
SEC61YLR378C PRP16P15938 1071 aaPredicted RBP9.31□□□□□ -0.92
SEC61YLR378C HRR25P29295 494 aaKnown RBP9.31□□□□□ -0.92
SEC61YLR378C SGE1P33335 543 aa9.31□□□□□ -0.92
SEC61YLR378C COY1P34237 679 aa9.31□□□□□ -0.92
SEC61YLR378C RRP14P36080 434 aaKnown RBP9.31□□□□□ -0.92
SEC61YLR378C KTR4P38131 464 aa9.31□□□□□ -0.92
SEC61YLR378C YHL041WP38730 149 aa9.31□□□□□ -0.92
SEC61YLR378C ELO3P40319 345 aa9.31□□□□□ -0.92
SEC61YLR378C PEP8P40335 379 aa9.31□□□□□ -0.92
SEC61YLR378C TRF5P48561 642 aaKnown RBP9.31□□□□□ -0.92
SEC61YLR378C PSP1P50896 841 aaKnown RBP9.31□□□□□ -0.92
SEC61YLR378C PAN2P53010 1115 aaPredicted RBP9.31□□□□□ -0.92
SEC61YLR378C RSC4Q02206 625 aa9.31□□□□□ -0.92
SEC61YLR378C TAF11Q04226 346 aa9.31□□□□□ -0.92
SEC61YLR378C CDC123Q05791 360 aa9.31□□□□□ -0.92
SEC61YLR378C LDB18Q07887 179 aa9.31□□□□□ -0.92
SEC61YLR378C YLR012CQ07927 99 aa9.31□□□□□ -0.92
SEC61YLR378C SPE4Q12455 300 aa9.31□□□□□ -0.92
SEC61YLR378C KCS1Q12494 1050 aa9.31□□□□□ -0.92
SEC61YLR378C COX5AP00424 153 aa9.31□□□□□ -0.92
SEC61YLR378C SPE1P08432 466 aa9.31□□□□□ -0.92
SEC61YLR378C RPC19P28000 142 aaKnown RBP9.31□□□□□ -0.92
SEC61YLR378C HSM3P38348 480 aa9.31□□□□□ -0.92
SEC61YLR378C PFK26P40433 827 aaKnown RBP9.31□□□□□ -0.92
SEC61YLR378C RRN7P40992 514 aa9.31□□□□□ -0.92
SEC61YLR378C FAR3P46671 204 aa9.31□□□□□ -0.92
SEC61YLR378C TRM112P53738 135 aaPredicted RBP9.31□□□□□ -0.92
SEC61YLR378C SUB1P54000 292 aaKnown RBP9.31□□□□□ -0.92
SEC61YLR378C VPS16Q03308 798 aa9.31□□□□□ -0.92
SEC61YLR378C ECM38Q05902 660 aaPredicted RBP9.31□□□□□ -0.92
Retrieved 100 of 5,963 RNA–protein pairs in 10.1 ms