RNA–Protein interactions for RNA: YLR336C

SGD1, Transcript of Essential nuclear protein, yeastyeast

Gene SGD1, Length 2,700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGD1YLR336C SEC3P33332 1336 aaKnown RBP2.42□□□□□ -2.02
SGD1YLR336C MTF2P10849 440 aa2.41□□□□□ -2.02
SGD1YLR336C PMA2P19657 947 aa2.41□□□□□ -2.02
SGD1YLR336C RPA135P22138 1203 aaKnown RBP2.41□□□□□ -2.02
SGD1YLR336C SAT4P25333 603 aaKnown RBP2.41□□□□□ -2.02
SGD1YLR336C ADY2P25613 283 aa2.41□□□□□ -2.02
SGD1YLR336C GDA1P32621 518 aa2.41□□□□□ -2.02
SGD1YLR336C UGP1P32861 499 aaKnown RBP2.41□□□□□ -2.02
SGD1YLR336C FLO10P36170 1169 aa2.41□□□□□ -2.02
SGD1YLR336C PSF2P40359 213 aa2.41□□□□□ -2.02
SGD1YLR336C YIL166CP40445 542 aa2.41□□□□□ -2.02
SGD1YLR336C BST1P43571 1029 aa2.41□□□□□ -2.02
SGD1YLR336C SVL3Q03088 825 aaKnown RBP2.41□□□□□ -2.02
SGD1YLR336C YML131WQ03102 365 aa2.41□□□□□ -2.02
SGD1YLR336C PSR2Q07949 397 aa2.41□□□□□ -2.02
SGD1YLR336C UBC1P21734 215 aaKnown RBP2.41□□□□□ -2.02
SGD1YLR336C PAC2P39937 518 aa2.41□□□□□ -2.02
SGD1YLR336C SMK1P41808 388 aa2.41□□□□□ -2.02
SGD1YLR336C WAR1Q03631 944 aa2.41□□□□□ -2.02
SGD1YLR336C RAD33Q04231 177 aa2.41□□□□□ -2.02
SGD1YLR336C YDL242WQ07746 117 aa2.41□□□□□ -2.02
SGD1YLR336C TRM8Q12009 286 aa2.41□□□□□ -2.02
SGD1YLR336C ULA1Q12059 462 aa2.41□□□□□ -2.02
SGD1YLR336C YER175W-AQ8TGU4 54 aa2.41□□□□□ -2.02
SGD1YLR336C PNO1Q99216 274 aaKnown RBP2.41□□□□□ -2.02
SGD1YLR336C BNR1P40450 1375 aa2.41□□□□□ -2.02
SGD1YLR336C RPN13O13563 156 aa2.4□□□□□ -2.02
SGD1YLR336C TOP1P04786 769 aa2.4□□□□□ -2.02
SGD1YLR336C RPL7AP05737 244 aaKnown RBP2.4□□□□□ -2.02
SGD1YLR336C SNF1P06782 633 aaKnown RBP2.4□□□□□ -2.02
SGD1YLR336C PET122P10355 254 aa2.4□□□□□ -2.02
SGD1YLR336C MRPL9P31334 269 aa2.4□□□□□ -2.02
SGD1YLR336C FSH1P38777 243 aaKnown RBP2.4□□□□□ -2.02
SGD1YLR336C EXO1P39875 702 aa2.4□□□□□ -2.02
SGD1YLR336C IMO32P53219 342 aa2.4□□□□□ -2.02
SGD1YLR336C RPL7BQ12213 244 aaKnown RBP2.4□□□□□ -2.02
SGD1YLR336C URK1P27515 501 aa2.4□□□□□ -2.03
SGD1YLR336C PPZ2P33329 710 aa2.4□□□□□ -2.03
SGD1YLR336C PSY4P38193 441 aa2.4□□□□□ -2.03
SGD1YLR336C MTG2P38860 518 aa2.4□□□□□ -2.03
SGD1YLR336C BUD16P39988 312 aa2.4□□□□□ -2.03
SGD1YLR336C MRK1P50873 501 aa2.4□□□□□ -2.03
SGD1YLR336C APM1Q00776 475 aaPredicted RBP2.4□□□□□ -2.03
SGD1YLR336C YPL108WQ02872 168 aaPredicted RBP2.4□□□□□ -2.03
SGD1YLR336C YML053CQ04978 212 aa2.4□□□□□ -2.03
SGD1YLR336C SSP2Q08646 371 aa2.4□□□□□ -2.03
SGD1YLR336C CHO2P05374 869 aaKnown RBP2.4□□□□□ -2.03
SGD1YLR336C ADE5,7P07244 802 aaKnown RBP2.4□□□□□ -2.03
SGD1YLR336C SPO11P23179 398 aa2.4□□□□□ -2.03
SGD1YLR336C YJU2P28320 278 aaPredicted RBP2.4□□□□□ -2.03
SGD1YLR336C RIX1P38883 763 aaPredicted RBP2.4□□□□□ -2.03
SGD1YLR336C TDA10P42938 290 aa2.4□□□□□ -2.03
SGD1YLR336C GFD1Q04839 188 aaKnown RBP2.4□□□□□ -2.03
SGD1YLR336C HRD3Q05787 833 aa2.4□□□□□ -2.03
SGD1YLR336C LCB4Q12246 624 aa2.4□□□□□ -2.03
SGD1YLR336C COX17Q12287 69 aa2.4□□□□□ -2.03
SGD1YLR336C AQY1P0CD91 305 aa2.39□□□□□ -2.03
SGD1YLR336C RRP43P25359 394 aaPredicted RBP2.39□□□□□ -2.03
SGD1YLR336C XRS2P33301 854 aa2.39□□□□□ -2.03
SGD1YLR336C GEX2P36173 615 aa2.39□□□□□ -2.03
SGD1YLR336C LNP1P38878 278 aa2.39□□□□□ -2.03
SGD1YLR336C ZAP1P47043 880 aa2.39□□□□□ -2.03
SGD1YLR336C NPA3P47122 385 aa2.39□□□□□ -2.03
SGD1YLR336C ARO10Q06408 635 aa2.39□□□□□ -2.03
SGD1YLR336C VAM6Q07468 1049 aa2.39□□□□□ -2.03
SGD1YLR336C CRT10Q08226 957 aa2.39□□□□□ -2.03
SGD1YLR336C PRS5Q12265 496 aaKnown RBP2.39□□□□□ -2.03
SGD1YLR336C AHA1Q12449 350 aaKnown RBP2.39□□□□□ -2.03
SGD1YLR336C SSM4P40318 1319 aa2.39□□□□□ -2.03
SGD1YLR336C KGD2P19262 463 aaPredicted RBP2.39□□□□□ -2.03
SGD1YLR336C NPR3P38742 1146 aa2.39□□□□□ -2.03
SGD1YLR336C SAP1P39955 897 aaKnown RBP2.39□□□□□ -2.03
SGD1YLR336C MAM1P40065 302 aa2.39□□□□□ -2.03
SGD1YLR336C CTF18P49956 741 aa2.39□□□□□ -2.03
SGD1YLR336C FMP30Q02883 468 aa2.39□□□□□ -2.03
SGD1YLR336C VID22Q05934 901 aa2.39□□□□□ -2.03
SGD1YLR336C CSR1Q06705 408 aaKnown RBP2.39□□□□□ -2.03
SGD1YLR336C BUD21Q08492 214 aaPredicted RBP2.39□□□□□ -2.03
SGD1YLR336C YBR255C-AQ3E776 120 aa2.39□□□□□ -2.03
SGD1YLR336C GUK1P15454 187 aaKnown RBP2.38□□□□□ -2.03
SGD1YLR336C ERC1P38767 581 aa2.38□□□□□ -2.03
SGD1YLR336C VID27P40157 782 aa2.38□□□□□ -2.03
SGD1YLR336C IML2P47031 731 aa2.38□□□□□ -2.03
SGD1YLR336C COG1P53079 417 aa2.38□□□□□ -2.03
SGD1YLR336C YGR079WP53249 370 aa2.38□□□□□ -2.03
SGD1YLR336C MRI1Q06489 411 aaKnown RBP2.38□□□□□ -2.03
SGD1YLR336C AI5_ALPHAQ9ZZX1 630 aa2.38□□□□□ -2.03
SGD1YLR336C COX1P00401 534 aa2.38□□□□□ -2.03
SGD1YLR336C AXL2P38928 823 aa2.38□□□□□ -2.03
SGD1YLR336C FAF1P40546 346 aaPredicted RBP2.38□□□□□ -2.03
SGD1YLR336C PSP1P50896 841 aaKnown RBP2.38□□□□□ -2.03
SGD1YLR336C PLM2Q04383 521 aa2.38□□□□□ -2.03
SGD1YLR336C CYK3Q07533 885 aa2.38□□□□□ -2.03
SGD1YLR336C RVB2Q12464 471 aaKnown RBP2.38□□□□□ -2.03
SGD1YLR336C ATP2P00830 511 aaKnown RBP2.37□□□□□ -2.03
SGD1YLR336C TUB1P09733 447 aaKnown RBP2.37□□□□□ -2.03
SGD1YLR336C HEM1P09950 548 aaPredicted RBP2.37□□□□□ -2.03
SGD1YLR336C YML003WP0CF16 290 aa2.37□□□□□ -2.03
SGD1YLR336C PDE1P22434 369 aa2.37□□□□□ -2.03
SGD1YLR336C RFA2P26754 273 aaKnown RBP2.37□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 34.9 ms