RNA–Protein interactions for RNA: YLR040C

AFB1, Transcript of MATalpha-specific a-factor blocker, yeastyeast

Gene AFB1, Length 675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AFB1YLR040C YOL114CQ12322 202 aa3.3□□□□□ -1.88
AFB1YLR040C ARP7Q12406 477 aa3.3□□□□□ -1.88
AFB1YLR040C TMA7Q3E764 64 aaKnown RBP3.3□□□□□ -1.88
AFB1YLR040C RTC1Q08281 1341 aa3.29□□□□□ -1.88
AFB1YLR040C CTT1P06115 562 aa3.29□□□□□ -1.88
AFB1YLR040C TMT1P32643 299 aa3.29□□□□□ -1.88
AFB1YLR040C YLF2P38746 405 aa3.29□□□□□ -1.88
AFB1YLR040C MAM1P40065 302 aa3.29□□□□□ -1.88
AFB1YLR040C LAS21P40367 830 aa3.29□□□□□ -1.88
AFB1YLR040C BPL1P48445 690 aaPredicted RBP3.29□□□□□ -1.88
AFB1YLR040C CRF1Q04930 467 aa3.29□□□□□ -1.88
AFB1YLR040C IRC3Q06683 689 aa3.29□□□□□ -1.88
AFB1YLR040C YDL242WQ07746 117 aa3.29□□□□□ -1.88
AFB1YLR040C PNO1Q99216 274 aaKnown RBP3.29□□□□□ -1.88
AFB1YLR040C GAL1P04385 528 aa3.28□□□□□ -1.88
AFB1YLR040C YMR085WP0CF18 432 aa3.28□□□□□ -1.88
AFB1YLR040C SST2P11972 698 aaKnown RBP3.28□□□□□ -1.88
AFB1YLR040C URE2P23202 354 aaKnown RBP3.28□□□□□ -1.88
AFB1YLR040C ECM32P32644 1121 aaKnown RBP3.28□□□□□ -1.88
AFB1YLR040C PSA1P41940 361 aaKnown RBP3.28□□□□□ -1.88
AFB1YLR040C GAT1P43574 510 aa3.28□□□□□ -1.88
AFB1YLR040C COG2P53271 262 aa3.28□□□□□ -1.88
AFB1YLR040C IDP3P53982 420 aaKnown RBP3.28□□□□□ -1.88
AFB1YLR040C MOT3P54785 490 aaKnown RBP3.28□□□□□ -1.88
AFB1YLR040C VPS64Q03944 604 aa3.28□□□□□ -1.88
AFB1YLR040C TPO3Q06451 622 aa3.28□□□□□ -1.88
AFB1YLR040C AIM6Q07716 390 aa3.28□□□□□ -1.88
AFB1YLR040C YAP7Q08182 245 aa3.28□□□□□ -1.88
AFB1YLR040C YER175W-AQ8TGU4 54 aa3.28□□□□□ -1.88
AFB1YLR040C BI2P03873 423 aa3.27□□□□□ -1.89
AFB1YLR040C KGD2P19262 463 aaPredicted RBP3.27□□□□□ -1.89
AFB1YLR040C FRD1P32614 470 aaKnown RBP3.27□□□□□ -1.89
AFB1YLR040C KES1P35844 434 aaKnown RBP3.27□□□□□ -1.89
AFB1YLR040C LNP1P38878 278 aa3.27□□□□□ -1.89
AFB1YLR040C STT3P39007 718 aaKnown RBP3.27□□□□□ -1.89
AFB1YLR040C CIN1P40987 1014 aa3.27□□□□□ -1.89
AFB1YLR040C TEP1P53916 434 aa3.27□□□□□ -1.89
AFB1YLR040C ERG13P54839 491 aaKnown RBP3.27□□□□□ -1.89
AFB1YLR040C STP1Q00947 519 aa3.27□□□□□ -1.89
AFB1YLR040C MET14Q02196 202 aa3.27□□□□□ -1.89
AFB1YLR040C YPL071CQ02864 156 aa3.27□□□□□ -1.89
AFB1YLR040C PLM2Q04383 521 aa3.27□□□□□ -1.89
AFB1YLR040C RAD34Q06665 692 aa3.27□□□□□ -1.89
AFB1YLR040C GEP3Q08622 556 aa3.27□□□□□ -1.89
AFB1YLR040C SES1P07284 462 aaKnown RBP3.26□□□□□ -1.89
AFB1YLR040C GRX7P38068 203 aa3.26□□□□□ -1.89
AFB1YLR040C FTH1P38310 465 aa3.26□□□□□ -1.89
AFB1YLR040C HIS6P40545 261 aa3.26□□□□□ -1.89
AFB1YLR040C QRI7P43122 407 aa3.26□□□□□ -1.89
AFB1YLR040C SNO3P43544 222 aa3.26□□□□□ -1.89
AFB1YLR040C IRC7P43623 340 aa3.26□□□□□ -1.89
AFB1YLR040C ESF2P53743 316 aaKnown RBP3.26□□□□□ -1.89
AFB1YLR040C RGT2Q12300 763 aa3.26□□□□□ -1.89
AFB1YLR040C CET1O13297 549 aaPredicted RBP3.25□□□□□ -1.89
AFB1YLR040C SIR1P21691 654 aa3.25□□□□□ -1.89
AFB1YLR040C SWI4P25302 1093 aaKnown RBP3.25□□□□□ -1.89
AFB1YLR040C VBA2P38358 474 aaKnown RBP3.25□□□□□ -1.89
AFB1YLR040C RRP8P38961 392 aaKnown RBP3.25□□□□□ -1.89
AFB1YLR040C ERV46P39727 415 aa3.25□□□□□ -1.89
AFB1YLR040C RAD26P40352 1085 aa3.25□□□□□ -1.89
AFB1YLR040C CIR1P42940 261 aa3.25□□□□□ -1.89
AFB1YLR040C SNU56Q03782 492 aaKnown RBP3.25□□□□□ -1.89
AFB1YLR040C HIM1Q06674 414 aa3.25□□□□□ -1.89
AFB1YLR040C BRE1Q07457 700 aaKnown RBP3.25□□□□□ -1.89
AFB1YLR040C MSS18P08593 268 aa3.24□□□□□ -1.89
AFB1YLR040C YAP1P19880 650 aaKnown RBP3.24□□□□□ -1.89
AFB1YLR040C YKL133CP36066 463 aa3.24□□□□□ -1.89
AFB1YLR040C APM3P38153 483 aa3.24□□□□□ -1.89
AFB1YLR040C UBP7P40453 1071 aa3.24□□□□□ -1.89
AFB1YLR040C YNL058CP53947 316 aa3.24□□□□□ -1.89
AFB1YLR040C YAT1P80235 687 aa3.24□□□□□ -1.89
AFB1YLR040C YOR389WQ08912 624 aa3.24□□□□□ -1.89
AFB1YLR040C LYS21Q12122 440 aaKnown RBP3.24□□□□□ -1.89
AFB1YLR040C CRC1Q12289 327 aa3.24□□□□□ -1.89
AFB1YLR040C YBR255C-AQ3E776 120 aa3.24□□□□□ -1.89
AFB1YLR040C GAL4P04386 881 aa3.23□□□□□ -1.89
AFB1YLR040C ADE3P07245 946 aaKnown RBP3.23□□□□□ -1.89
AFB1YLR040C POL3P15436 1097 aa3.23□□□□□ -1.89
AFB1YLR040C MCM3P24279 971 aaKnown RBP3.23□□□□□ -1.89
AFB1YLR040C GSH1P32477 678 aa3.23□□□□□ -1.89
AFB1YLR040C ERC1P38767 581 aa3.23□□□□□ -1.89
AFB1YLR040C SPC72P39723 622 aa3.23□□□□□ -1.89
AFB1YLR040C NPA3P47122 385 aa3.23□□□□□ -1.89
AFB1YLR040C SEC5P89102 971 aa3.23□□□□□ -1.89
AFB1YLR040C MLC2Q06580 163 aa3.23□□□□□ -1.89
AFB1YLR040C SUL2Q12325 893 aa3.23□□□□□ -1.89
AFB1YLR040C COX1P00401 534 aa3.22□□□□□ -1.89
AFB1YLR040C YER190C-BP0CX94 160 aa3.22□□□□□ -1.89
AFB1YLR040C YEL077W-AP0CX95 160 aa3.22□□□□□ -1.89
AFB1YLR040C YGR296C-BP0CX96 160 aa3.22□□□□□ -1.89
AFB1YLR040C YPL283W-BP0CX97 160 aa3.22□□□□□ -1.89
AFB1YLR040C YPR204C-AP0CX98 160 aa3.22□□□□□ -1.89
AFB1YLR040C SEC18P18759 758 aaKnown RBP3.22□□□□□ -1.89
AFB1YLR040C RIT1P23796 513 aa3.22□□□□□ -1.89
AFB1YLR040C PTP2P29461 750 aa3.22□□□□□ -1.89
AFB1YLR040C SIP1P32578 815 aa3.22□□□□□ -1.89
AFB1YLR040C RPF2P36160 344 aaKnown RBP3.22□□□□□ -1.89
AFB1YLR040C CAB2P40506 365 aa3.22□□□□□ -1.89
AFB1YLR040C YIL024CP40543 189 aa3.22□□□□□ -1.89
AFB1YLR040C NOP2P40991 618 aaKnown RBP3.22□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms