RNA–Protein interactions for RNA: YKL099C

UTP11, Transcript of Subunit of U3-containing Small Subunit (SSU) processome complex, yeast

Gene UTP11, Length 753 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UTP11	YKL099C	SAT4	P25333	603 aa	Known RBP	4.24	□□□□□ -1.73
UTP11	YKL099C	RDS1	P25611	832 aa		4.24	□□□□□ -1.73
UTP11	YKL099C	CAP1	P28495	268 aa	Known RBP	4.24	□□□□□ -1.73
UTP11	YKL099C	CCR4	P31384	837 aa	Known RBP	4.24	□□□□□ -1.73
UTP11	YKL099C	MAL33	P38157	468 aa		4.24	□□□□□ -1.73
UTP11	YKL099C	TIF34	P40217	347 aa	Known RBP	4.24	□□□□□ -1.73
UTP11	YKL099C	RPT2	P40327	437 aa	Known RBP	4.24	□□□□□ -1.73
UTP11	YKL099C	YPS6	P40583	537 aa		4.24	□□□□□ -1.73
UTP11	YKL099C	LCB2	P40970	561 aa		4.24	□□□□□ -1.73
UTP11	YKL099C	COQ5	P49017	307 aa		4.24	□□□□□ -1.73
UTP11	YKL099C	PYK2	P52489	506 aa	Known RBP	4.24	□□□□□ -1.73
UTP11	YKL099C	COP1	P53622	1201 aa	Known RBP	4.24	□□□□□ -1.73
UTP11	YKL099C	PEX13	P80667	386 aa		4.24	□□□□□ -1.73
UTP11	YKL099C	RPA49	Q01080	415 aa	Predicted RBP	4.24	□□□□□ -1.73
UTP11	YKL099C	SPG3	Q04398	127 aa	Predicted RBP	4.24	□□□□□ -1.73
UTP11	YKL099C	HRD3	Q05787	833 aa		4.24	□□□□□ -1.73
UTP11	YKL099C	RSA3	Q05942	220 aa	Known RBP	4.24	□□□□□ -1.73
UTP11	YKL099C	RLP24	Q07915	199 aa	Known RBP	4.24	□□□□□ -1.73
UTP11	YKL099C	OPI10	Q08202	246 aa		4.24	□□□□□ -1.73
UTP11	YKL099C	YOR387C	Q08910	206 aa		4.24	□□□□□ -1.73
UTP11	YKL099C	YPL150W	Q12152	901 aa		4.24	□□□□□ -1.73
UTP11	YKL099C	PRP8	P33334	2413 aa	Known RBP	4.24	□□□□□ -1.73
UTP11	YKL099C	REV1	P12689	985 aa		4.23	□□□□□ -1.73
UTP11	YKL099C	ARF2	P19146	181 aa	Known RBP	4.23	□□□□□ -1.73
UTP11	YKL099C	FPR1	P20081	114 aa	Known RBP	4.23	□□□□□ -1.73
UTP11	YKL099C	VMA4	P22203	233 aa	Known RBP	4.23	□□□□□ -1.73
UTP11	YKL099C	BMH1	P29311	267 aa	Known RBP	4.23	□□□□□ -1.73
UTP11	YKL099C	PRO1	P32264	428 aa		4.23	□□□□□ -1.73
UTP11	YKL099C	RML2	P32611	393 aa		4.23	□□□□□ -1.73
UTP11	YKL099C	NOP4	P37838	685 aa	Known RBP	4.23	□□□□□ -1.73
UTP11	YKL099C	LEU5	P38702	357 aa		4.23	□□□□□ -1.73
UTP11	YKL099C	HEM14	P40012	539 aa		4.23	□□□□□ -1.73
UTP11	YKL099C	DSE1	P40077	573 aa		4.23	□□□□□ -1.73
UTP11	YKL099C	LTP1	P40347	161 aa		4.23	□□□□□ -1.73
UTP11	YKL099C	DSN1	P40568	576 aa		4.23	□□□□□ -1.73
UTP11	YKL099C	CPR7	P47103	393 aa		4.23	□□□□□ -1.73
UTP11	YKL099C	COS5	P47187	383 aa		4.23	□□□□□ -1.73
UTP11	YKL099C	HFM1	P51979	1187 aa		4.23	□□□□□ -1.73
UTP11	YKL099C	NUP84	P52891	726 aa		4.23	□□□□□ -1.73
UTP11	YKL099C	VEL1	P53058	206 aa		4.23	□□□□□ -1.73
UTP11	YKL099C	YGL140C	P53120	1219 aa		4.23	□□□□□ -1.73
UTP11	YKL099C	YGL036W	P53185	909 aa	Predicted RBP	4.23	□□□□□ -1.73
UTP11	YKL099C	TPP1	Q03796	238 aa		4.23	□□□□□ -1.73
UTP11	YKL099C	RCL1	Q08096	367 aa	Predicted RBP	4.23	□□□□□ -1.73
UTP11	YKL099C	MDM38	Q08179	573 aa		4.23	□□□□□ -1.73
UTP11	YKL099C	SVS1	Q12254	260 aa		4.23	□□□□□ -1.73
UTP11	YKL099C	ARP7	Q12406	477 aa		4.23	□□□□□ -1.73
UTP11	YKL099C	JIP3	O13555	125 aa		4.22	□□□□□ -1.73
UTP11	YKL099C	COX11	P19516	300 aa	Known RBP	4.22	□□□□□ -1.73
UTP11	YKL099C	GAS1	P22146	559 aa	Known RBP	4.22	□□□□□ -1.73
UTP11	YKL099C	HIR1	P32479	840 aa		4.22	□□□□□ -1.73
UTP11	YKL099C	PDR3	P33200	976 aa		4.22	□□□□□ -1.73
UTP11	YKL099C	ECM13	P38195	257 aa		4.22	□□□□□ -1.73
UTP11	YKL099C	CBR1	P38626	284 aa	Known RBP	4.22	□□□□□ -1.73
UTP11	YKL099C	URA8	P38627	578 aa	Predicted RBP	4.22	□□□□□ -1.73
UTP11	YKL099C	PTC7	P38797	343 aa		4.22	□□□□□ -1.73
UTP11	YKL099C	FHL1	P39521	936 aa		4.22	□□□□□ -1.73
UTP11	YKL099C	PIC2	P40035	300 aa		4.22	□□□□□ -1.73
UTP11	YKL099C	BST1	P43571	1029 aa		4.22	□□□□□ -1.73
UTP11	YKL099C	PRP24	P49960	444 aa	Known RBP	4.22	□□□□□ -1.73
UTP11	YKL099C	FLC3	P53121	802 aa		4.22	□□□□□ -1.73
UTP11	YKL099C	DRN1	P53255	507 aa	Known RBP	4.22	□□□□□ -1.73
UTP11	YKL099C	AQR1	P53943	586 aa		4.22	□□□□□ -1.73
UTP11	YKL099C	ADI1	Q03677	179 aa		4.22	□□□□□ -1.73
UTP11	YKL099C	VMS1	Q04311	632 aa	Known RBP	4.22	□□□□□ -1.73
UTP11	YKL099C	RTN1	Q04947	295 aa	Known RBP	4.22	□□□□□ -1.73
UTP11	YKL099C	RSB1	Q08417	382 aa		4.22	□□□□□ -1.73
UTP11	YKL099C	TCO89	Q08921	799 aa		4.22	□□□□□ -1.73
UTP11	YKL099C	YDL177C	Q12257	170 aa		4.22	□□□□□ -1.73
UTP11	YKL099C	GIS3	Q12418	502 aa		4.22	□□□□□ -1.73
UTP11	YKL099C	COX3	P00420	269 aa		4.21	□□□□□ -1.74
UTP11	YKL099C	BIK1	P11709	440 aa		4.21	□□□□□ -1.74
UTP11	YKL099C	SEC23	P15303	768 aa	Known RBP	4.21	□□□□□ -1.74
UTP11	YKL099C	ERG6	P25087	383 aa	Known RBP	4.21	□□□□□ -1.74
UTP11	YKL099C	PSO2	P30620	661 aa		4.21	□□□□□ -1.74
UTP11	YKL099C	SFP1	P32432	683 aa		4.21	□□□□□ -1.74
UTP11	YKL099C	SEC6	P32844	805 aa		4.21	□□□□□ -1.74
UTP11	YKL099C	WBP1	P33767	430 aa	Known RBP	4.21	□□□□□ -1.74
UTP11	YKL099C	PXA2	P34230	853 aa		4.21	□□□□□ -1.74
UTP11	YKL099C	THI80	P35202	319 aa		4.21	□□□□□ -1.74
UTP11	YKL099C	UTH1	P36135	365 aa		4.21	□□□□□ -1.74
UTP11	YKL099C	YHR078W	P38799	552 aa		4.21	□□□□□ -1.74
UTP11	YKL099C	SER33	P40510	469 aa		4.21	□□□□□ -1.74
UTP11	YKL099C	GTS1	P40956	396 aa		4.21	□□□□□ -1.74
UTP11	YKL099C	CNN1	P43618	361 aa		4.21	□□□□□ -1.74
UTP11	YKL099C	MND1	P53102	219 aa		4.21	□□□□□ -1.74
UTP11	YKL099C	TRM112	P53738	135 aa	Predicted RBP	4.21	□□□□□ -1.74
UTP11	YKL099C	GPD1	Q00055	391 aa	Known RBP	4.21	□□□□□ -1.74
UTP11	YKL099C	YPL014W	Q02606	381 aa		4.21	□□□□□ -1.74
UTP11	YKL099C	PIR3	Q03180	325 aa		4.21	□□□□□ -1.74
UTP11	YKL099C	YMR206W	Q03695	313 aa		4.21	□□□□□ -1.74
UTP11	YKL099C	ARO80	Q04052	950 aa		4.21	□□□□□ -1.74
UTP11	YKL099C	YSH1	Q06224	779 aa	Predicted RBP	4.21	□□□□□ -1.74
UTP11	YKL099C	SIL1	Q08199	421 aa		4.21	□□□□□ -1.74
UTP11	YKL099C	PEX15	Q08215	383 aa		4.21	□□□□□ -1.74
UTP11	YKL099C	APC5	Q08683	685 aa		4.21	□□□□□ -1.74
UTP11	YKL099C	ECM3	Q99252	613 aa		4.21	□□□□□ -1.74
UTP11	YKL099C	PAB1	P04147	577 aa	Known RBP RIP-Chip data	4.2	□□□□□ -1.74	RIP-Chip
UTP11	YKL099C	SPT15	P13393	240 aa	Known RBP	4.2	□□□□□ -1.74
UTP11	YKL099C	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.2	□□□□□ -1.74	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 16.7 ms