RNA–Protein interactions for RNA: YJR042W

NUP85, Transcript of Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC), yeastyeast

Gene NUP85, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP85YJR042W CHS5Q12114 671 aaKnown RBP3.95□□□□□ -1.78
NUP85YJR042W NMD4Q12129 218 aa3.95□□□□□ -1.78
NUP85YJR042W RPO41P13433 1351 aaKnown RBP3.95□□□□□ -1.78
NUP85YJR042W RPB2P08518 1224 aaKnown RBP3.95□□□□□ -1.78
NUP85YJR042W CLB1P24868 471 aa3.95□□□□□ -1.78
NUP85YJR042W NIP1P32497 812 aaKnown RBP3.95□□□□□ -1.78
NUP85YJR042W SMI1P32566 505 aa3.95□□□□□ -1.78
NUP85YJR042W MTC7P32633 139 aa3.95□□□□□ -1.78
NUP85YJR042W MAC1P35192 417 aa3.95□□□□□ -1.78
NUP85YJR042W BSC5P53755 489 aa3.95□□□□□ -1.78
NUP85YJR042W RIA1P53893 1110 aa3.95□□□□□ -1.78
NUP85YJR042W RCR2Q03446 210 aaKnown RBP3.95□□□□□ -1.78
NUP85YJR042W RPC11Q04307 110 aaPredicted RBP3.95□□□□□ -1.78
NUP85YJR042W STP4Q07351 490 aa3.95□□□□□ -1.78
NUP85YJR042W ENT4Q07872 247 aa3.95□□□□□ -1.78
NUP85YJR042W SFI1Q12369 946 aa3.95□□□□□ -1.78
NUP85YJR042W RPP2BP02400 110 aaKnown RBP3.94□□□□□ -1.78
NUP85YJR042W YCK1P23291 538 aa3.94□□□□□ -1.78
NUP85YJR042W RPT3P33298 428 aaKnown RBP3.94□□□□□ -1.78
NUP85YJR042W PIM1P36775 1133 aa3.94□□□□□ -1.78
NUP85YJR042W RPN10P38886 268 aaKnown RBP3.94□□□□□ -1.78
NUP85YJR042W SMF1P38925 575 aa3.94□□□□□ -1.78
NUP85YJR042W YTA6P40328 754 aa3.94□□□□□ -1.78
NUP85YJR042W MET18P40469 1032 aa3.94□□□□□ -1.78
NUP85YJR042W YJL181WP46987 611 aa3.94□□□□□ -1.78
NUP85YJR042W SAP4P53036 818 aa3.94□□□□□ -1.78
NUP85YJR042W IMA1P53051 589 aa3.94□□□□□ -1.78
NUP85YJR042W HDA1P53973 706 aa3.94□□□□□ -1.78
NUP85YJR042W ACS1Q01574 713 aa3.94□□□□□ -1.78
NUP85YJR042W YML082WQ04533 649 aaKnown RBP3.94□□□□□ -1.78
NUP85YJR042W FMP45Q07651 309 aa3.94□□□□□ -1.78
NUP85YJR042W THI21Q08975 551 aa3.94□□□□□ -1.78
NUP85YJR042W GPM3Q12326 303 aa3.94□□□□□ -1.78
NUP85YJR042W GPR1Q12361 961 aa3.94□□□□□ -1.78
NUP85YJR042W SOD2P00447 233 aa3.94□□□□□ -1.78
NUP85YJR042W TUB2P02557 457 aaKnown RBP3.94□□□□□ -1.78
NUP85YJR042W RIT1P23796 513 aa3.94□□□□□ -1.78
NUP85YJR042W PRO1P32264 428 aa3.94□□□□□ -1.78
NUP85YJR042W AKL1P38080 1108 aaKnown RBP3.94□□□□□ -1.78
NUP85YJR042W YHR097CP38809 366 aaKnown RBP3.94□□□□□ -1.78
NUP85YJR042W GPB2P39717 880 aa3.94□□□□□ -1.78
NUP85YJR042W YJR061WP40355 935 aa3.94□□□□□ -1.78
NUP85YJR042W GPD1Q00055 391 aaKnown RBP3.94□□□□□ -1.78
NUP85YJR042W GYL1Q04322 720 aa3.94□□□□□ -1.78
NUP85YJR042W RPN7Q06103 429 aaKnown RBP3.94□□□□□ -1.78
NUP85YJR042W RTT109Q07794 436 aa3.94□□□□□ -1.78
NUP85YJR042W TY4B-HP0C2J7 1802 aa3.94□□□□□ -1.78
NUP85YJR042W TY4B-JP47024 1803 aa3.94□□□□□ -1.78
NUP85YJR042W SAC3P46674 1301 aa3.93□□□□□ -1.78
NUP85YJR042W PCT1P13259 424 aa3.93□□□□□ -1.78
NUP85YJR042W ADE2P21264 571 aaKnown RBP3.93□□□□□ -1.78
NUP85YJR042W PRP28P23394 588 aa3.93□□□□□ -1.78
NUP85YJR042W PRP22P24384 1145 aaKnown RBP3.93□□□□□ -1.78
NUP85YJR042W RPN2P32565 945 aaKnown RBP3.93□□□□□ -1.78
NUP85YJR042W WHI3P34761 661 aaKnown RBP3.93□□□□□ -1.78
NUP85YJR042W YKR078WP36158 585 aaKnown RBP3.93□□□□□ -1.78
NUP85YJR042W POL12P38121 705 aaPredicted RBP3.93□□□□□ -1.78
NUP85YJR042W PPE1P38796 400 aa3.93□□□□□ -1.78
NUP85YJR042W TIF4631P39935 952 aaKnown RBP3.93□□□□□ -1.78
NUP85YJR042W ARB1P40024 610 aaKnown RBP3.93□□□□□ -1.78
NUP85YJR042W FET4P40988 552 aa3.93□□□□□ -1.78
NUP85YJR042W ARF3P40994 183 aaRIP-Chip data3.93□□□□□ -1.78not detected
NUP85YJR042W SKG3Q06315 1026 aa3.93□□□□□ -1.78
NUP85YJR042W YRF1-2P40105 1681 aa3.93□□□□□ -1.78
NUP85YJR042W ADE6P38972 1358 aaKnown RBP3.93□□□□□ -1.78
NUP85YJR042W RRP5Q05022 1729 aaKnown RBP3.93□□□□□ -1.78
NUP85YJR042W CET1O13297 549 aaPredicted RBP3.93□□□□□ -1.78
NUP85YJR042W BIK1P11709 440 aa3.93□□□□□ -1.78
NUP85YJR042W ERV1P27882 189 aa3.93□□□□□ -1.78
NUP85YJR042W RME1P32338 300 aaKnown RBP3.93□□□□□ -1.78
NUP85YJR042W VPS17P32913 551 aa3.93□□□□□ -1.78
NUP85YJR042W COY1P34237 679 aa3.93□□□□□ -1.78
NUP85YJR042W TEF4P36008 412 aaKnown RBP3.93□□□□□ -1.78
NUP85YJR042W SDS22P36047 338 aa3.93□□□□□ -1.78
NUP85YJR042W CAB3P36076 571 aa3.93□□□□□ -1.78
NUP85YJR042W GEX2P36173 615 aa3.93□□□□□ -1.78
NUP85YJR042W THI2P38141 450 aa3.93□□□□□ -1.78
NUP85YJR042W YSW1P38280 609 aa3.93□□□□□ -1.78
NUP85YJR042W MUP3P38734 546 aa3.93□□□□□ -1.78
NUP85YJR042W UBP7P40453 1071 aa3.93□□□□□ -1.78
NUP85YJR042W PKP1P40530 394 aa3.93□□□□□ -1.78
NUP85YJR042W ZIM17P42844 174 aa3.93□□□□□ -1.78
NUP85YJR042W BST1P43571 1029 aa3.93□□□□□ -1.78
NUP85YJR042W GAD1Q04792 585 aa3.93□□□□□ -1.78
NUP85YJR042W PUF3Q07807 879 aaKnown RBP RIP-Chip data3.93□□□□□ -1.78not detected
NUP85YJR042W APL4Q12028 832 aa3.93□□□□□ -1.78
NUP85YJR042W ICL2Q12031 575 aa3.93□□□□□ -1.78
NUP85YJR042W SPE4Q12455 300 aa3.93□□□□□ -1.78
NUP85YJR042W ARO3P14843 370 aaKnown RBP3.92□□□□□ -1.78
NUP85YJR042W AMS1P22855 1083 aa3.92□□□□□ -1.78
NUP85YJR042W SPB1P25582 841 aaPredicted RBP3.92□□□□□ -1.78
NUP85YJR042W YEL043WP32618 956 aa3.92□□□□□ -1.78
NUP85YJR042W UTP9P38882 575 aaKnown RBP3.92□□□□□ -1.78
NUP85YJR042W CCT7P42943 550 aaKnown RBP3.92□□□□□ -1.78
NUP85YJR042W NUP84P52891 726 aa3.92□□□□□ -1.78
NUP85YJR042W ART5P53244 586 aaKnown RBP3.92□□□□□ -1.78
NUP85YJR042W LSB1P53281 241 aa3.92□□□□□ -1.78
NUP85YJR042W SRT1Q03175 343 aa3.92□□□□□ -1.78
NUP85YJR042W VBA4Q04602 768 aaKnown RBP3.92□□□□□ -1.78
NUP85YJR042W MCP2Q06567 569 aa3.92□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 16.5 ms