RNA–Protein interactions for RNA: YJL006C

CTK2, Transcript of Beta subunit of C-terminal domain kinase I (CTDK-I), yeast

Gene CTK2, Length 972 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CTK2	YJL006C	TOM20	P35180	183 aa		4.28	□□□□□ -1.72
CTK2	YJL006C	ENP1	P38333	483 aa	Known RBP	4.28	□□□□□ -1.72
CTK2	YJL006C	CIR1	P42940	261 aa		4.28	□□□□□ -1.72
CTK2	YJL006C	SLD3	P53135	668 aa		4.28	□□□□□ -1.72
CTK2	YJL006C	NGL1	Q08213	363 aa	Known RBP	4.28	□□□□□ -1.72
CTK2	YJL006C	COX11	P19516	300 aa	Known RBP	4.27	□□□□□ -1.73
CTK2	YJL006C	HEM12	P32347	362 aa	Predicted RBP	4.27	□□□□□ -1.73
CTK2	YJL006C	SDH8	P38345	138 aa		4.27	□□□□□ -1.73
CTK2	YJL006C	EMP65	P40085	556 aa		4.27	□□□□□ -1.73
CTK2	YJL006C	YIL152W	P40455	235 aa		4.27	□□□□□ -1.73
CTK2	YJL006C	YTH1	Q06102	208 aa	Predicted RBP	4.27	□□□□□ -1.73
CTK2	YJL006C	YOR389W	Q08912	624 aa		4.27	□□□□□ -1.73
CTK2	YJL006C	YCR043C	P25361	127 aa		4.26	□□□□□ -1.73
CTK2	YJL006C	PLC1	P32383	869 aa		4.26	□□□□□ -1.73
CTK2	YJL006C	SCO2	P38072	301 aa		4.26	□□□□□ -1.73
CTK2	YJL006C	PEX14	P53112	341 aa		4.26	□□□□□ -1.73
CTK2	YJL006C	MDR1	P53258	950 aa		4.26	□□□□□ -1.73
CTK2	YJL006C	COG2	P53271	262 aa		4.26	□□□□□ -1.73
CTK2	YJL006C	SCW10	Q04951	389 aa		4.26	□□□□□ -1.73
CTK2	YJL006C	SRP68	P38687	599 aa	Known RBP	4.25	□□□□□ -1.73
CTK2	YJL006C	LAS21	P40367	830 aa		4.25	□□□□□ -1.73
CTK2	YJL006C	YML119W	Q03208	357 aa		4.25	□□□□□ -1.73
CTK2	YJL006C	GRS2	Q06817	618 aa		4.25	□□□□□ -1.73
CTK2	YJL006C	NRT1	Q08485	598 aa		4.25	□□□□□ -1.73
CTK2	YJL006C	DSE3	Q08729	430 aa		4.25	□□□□□ -1.73
CTK2	YJL006C	RTC1	Q08281	1341 aa		4.24	□□□□□ -1.73
CTK2	YJL006C	CBP3	P21560	335 aa		4.24	□□□□□ -1.73
CTK2	YJL006C	RRP43	P25359	394 aa	Predicted RBP	4.24	□□□□□ -1.73
CTK2	YJL006C	TFC4	P33339	1025 aa		4.24	□□□□□ -1.73
CTK2	YJL006C	TOM71	P38825	639 aa	Known RBP	4.24	□□□□□ -1.73
CTK2	YJL006C	TES1	P41903	349 aa	Known RBP	4.24	□□□□□ -1.73
CTK2	YJL006C	IRC5	P43610	853 aa		4.24	□□□□□ -1.73
CTK2	YJL006C	PFA4	Q12006	378 aa		4.24	□□□□□ -1.73
CTK2	YJL006C	CHO2	P05374	869 aa	Known RBP	4.23	□□□□□ -1.73
CTK2	YJL006C	KAR1	P11927	433 aa		4.23	□□□□□ -1.73
CTK2	YJL006C	ARC40	P38328	384 aa	Known RBP	4.23	□□□□□ -1.73
CTK2	YJL006C	RRP8	P38961	392 aa	Known RBP	4.23	□□□□□ -1.73
CTK2	YJL006C	PEA2	P40091	420 aa		4.23	□□□□□ -1.73
CTK2	YJL006C	YGL260W	P53056	76 aa		4.23	□□□□□ -1.73
CTK2	YJL006C	VTC3	Q02725	835 aa		4.23	□□□□□ -1.73
CTK2	YJL006C	UBP16	Q02863	499 aa		4.23	□□□□□ -1.73
CTK2	YJL006C	PEX15	Q08215	383 aa		4.23	□□□□□ -1.73
CTK2	YJL006C	GET3	Q12154	354 aa	Known RBP	4.23	□□□□□ -1.73
CTK2	YJL006C	PHO2	P07269	559 aa		4.22	□□□□□ -1.73
CTK2	YJL006C	AMD2	P22580	549 aa		4.22	□□□□□ -1.73
CTK2	YJL006C	CWH43	P25618	953 aa		4.22	□□□□□ -1.73
CTK2	YJL006C	KES1	P35844	434 aa	Known RBP	4.22	□□□□□ -1.73
CTK2	YJL006C	YMR034C	Q05131	434 aa	Predicted RBP	4.22	□□□□□ -1.73
CTK2	YJL006C	PHM6	Q05637	104 aa		4.22	□□□□□ -1.73
CTK2	YJL006C	ECM38	Q05902	660 aa	Predicted RBP	4.22	□□□□□ -1.73
CTK2	YJL006C	YOR378W	Q08902	515 aa		4.22	□□□□□ -1.73
CTK2	YJL006C	CWC2	Q12046	339 aa	Predicted RBP	4.22	□□□□□ -1.73
CTK2	YJL006C	Q0010	Q9ZZX9	128 aa		4.22	□□□□□ -1.73
CTK2	YJL006C	SEC18	P18759	758 aa	Known RBP	4.21	□□□□□ -1.74
CTK2	YJL006C	SAP1	P39955	897 aa	Known RBP	4.21	□□□□□ -1.74
CTK2	YJL006C	EAF5	P39995	279 aa		4.21	□□□□□ -1.74
CTK2	YJL006C	MAM1	P40065	302 aa		4.21	□□□□□ -1.74
CTK2	YJL006C	RAD26	P40352	1085 aa		4.21	□□□□□ -1.74
CTK2	YJL006C	PEX8	P53248	589 aa		4.21	□□□□□ -1.74
CTK2	YJL006C	HOL1	P53389	586 aa		4.21	□□□□□ -1.74
CTK2	YJL006C	AAT1	Q01802	451 aa		4.21	□□□□□ -1.74
CTK2	YJL006C	PLM2	Q04383	521 aa		4.21	□□□□□ -1.74
CTK2	YJL006C	RAD34	Q06665	692 aa		4.21	□□□□□ -1.74
CTK2	YJL006C	SLX4	Q12098	748 aa		4.21	□□□□□ -1.74
CTK2	YJL006C	LYS21	Q12122	440 aa	Known RBP	4.21	□□□□□ -1.74
CTK2	YJL006C	MET30	P39014	640 aa		4.2	□□□□□ -1.74
CTK2	YJL006C	NOP2	P40991	618 aa	Known RBP	4.2	□□□□□ -1.74
CTK2	YJL006C	COS12	P53053	380 aa		4.2	□□□□□ -1.74
CTK2	YJL006C	TGL2	P54857	326 aa		4.2	□□□□□ -1.74
CTK2	YJL006C	MLH2	Q07980	695 aa		4.2	□□□□□ -1.74
CTK2	YJL006C	LCB4	Q12246	624 aa		4.2	□□□□□ -1.74
CTK2	YJL006C	TMA7	Q3E764	64 aa	Known RBP	4.2	□□□□□ -1.74
CTK2	YJL006C	VPS5	Q92331	675 aa		4.2	□□□□□ -1.74
CTK2	YJL006C	RTT107	P38850	1070 aa		4.19	□□□□□ -1.74
CTK2	YJL006C	VPS8	P39702	1274 aa		4.19	□□□□□ -1.74
CTK2	YJL006C	STL1	P39932	569 aa		4.19	□□□□□ -1.74
CTK2	YJL006C	ARA2	Q04212	335 aa		4.19	□□□□□ -1.74
CTK2	YJL006C	ECM22	Q05958	814 aa	Predicted RBP	4.19	□□□□□ -1.74
CTK2	YJL006C	GRX7	P38068	203 aa		4.18	□□□□□ -1.74
CTK2	YJL006C	SSP120	P39931	234 aa	Known RBP	4.18	□□□□□ -1.74
CTK2	YJL006C	YIL169C	P40442	995 aa		4.18	□□□□□ -1.74
CTK2	YJL006C	YPT11	P48559	417 aa		4.18	□□□□□ -1.74
CTK2	YJL006C	YNL034W	P53963	612 aa		4.18	□□□□□ -1.74
CTK2	YJL006C	SND1	Q04007	877 aa		4.18	□□□□□ -1.74
CTK2	YJL006C	YML053C	Q04978	212 aa		4.18	□□□□□ -1.74
CTK2	YJL006C	RRI1	Q12468	440 aa		4.18	□□□□□ -1.74
CTK2	YJL006C	ARG1	P22768	420 aa		4.17	□□□□□ -1.74
CTK2	YJL006C	CNA1	P23287	553 aa		4.17	□□□□□ -1.74
CTK2	YJL006C	ERV46	P39727	415 aa		4.17	□□□□□ -1.74
CTK2	YJL006C	MNT2	P53059	558 aa		4.17	□□□□□ -1.74
CTK2	YJL006C	DIN7	Q12086	430 aa		4.17	□□□□□ -1.74
CTK2	YJL006C	RTK1	Q12100	620 aa	Predicted RBP	4.17	□□□□□ -1.74
CTK2	YJL006C	STB5	P38699	743 aa		4.16	□□□□□ -1.74
CTK2	YJL006C	MAD2	P40958	196 aa		4.16	□□□□□ -1.74
CTK2	YJL006C	CNM67	P53865	581 aa	Known RBP	4.16	□□□□□ -1.74
CTK2	YJL006C	YDL242W	Q07746	117 aa		4.16	□□□□□ -1.74
CTK2	YJL006C	MPD2	Q99316	277 aa		4.16	□□□□□ -1.74
CTK2	YJL006C	LNP1	P38878	278 aa		4.15	□□□□□ -1.75
CTK2	YJL006C	YJL107C	P42947	387 aa		4.15	□□□□□ -1.75
CTK2	YJL006C	URA3	P03962	267 aa		4.14	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 28.8 ms