RNA–Protein interactions for RNA: YHR009C

TDA3, Transcript of Putative oxidoreductase involved in late endosome to Golgi transport, yeastyeast

Gene TDA3, Length 1,572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TDA3YHR009C IRC6P43615 237 aa4.51□□□□□ -1.69
TDA3YHR009C NBP2Q12163 236 aa4.51□□□□□ -1.69
TDA3YHR009C PMA1P05030 918 aaKnown RBP4.5□□□□□ -1.69
TDA3YHR009C RPB2P08518 1224 aaKnown RBP4.5□□□□□ -1.69
TDA3YHR009C RPL19AP0CX82 189 aaKnown RBP4.5□□□□□ -1.69
TDA3YHR009C RPL19BP0CX83 189 aaPredicted RBP4.5□□□□□ -1.69
TDA3YHR009C THR1P17423 357 aaKnown RBP4.5□□□□□ -1.69
TDA3YHR009C OLE1P21147 510 aaKnown RBP4.5□□□□□ -1.69
TDA3YHR009C SGF29P25554 259 aa4.5□□□□□ -1.69
TDA3YHR009C FUB1P25659 250 aa4.5□□□□□ -1.69
TDA3YHR009C ELF1P36053 145 aa4.5□□□□□ -1.69
TDA3YHR009C NOP4P37838 685 aaKnown RBP4.5□□□□□ -1.69
TDA3YHR009C YHR097CP38809 366 aaKnown RBP4.5□□□□□ -1.69
TDA3YHR009C ARE2P53629 642 aaKnown RBP4.5□□□□□ -1.69
TDA3YHR009C MRPL19P53875 158 aa4.5□□□□□ -1.69
TDA3YHR009C REG1Q00816 1014 aa4.5□□□□□ -1.69
TDA3YHR009C RCO1Q04779 684 aa4.5□□□□□ -1.69
TDA3YHR009C CRF1Q04930 467 aa4.5□□□□□ -1.69
TDA3YHR009C YDL086WQ07505 273 aa4.5□□□□□ -1.69
TDA3YHR009C PNO1Q99216 274 aaKnown RBP4.5□□□□□ -1.69
TDA3YHR009C TUB2P02557 457 aaKnown RBP4.49□□□□□ -1.69
TDA3YHR009C EFT1P32324 842 aaKnown RBP4.49□□□□□ -1.69
TDA3YHR009C SAC6P32599 642 aaKnown RBP4.49□□□□□ -1.69
TDA3YHR009C RKM3P38222 552 aa4.49□□□□□ -1.69
TDA3YHR009C YBR225WP38321 900 aa4.49□□□□□ -1.69
TDA3YHR009C SKP2P42843 763 aa4.49□□□□□ -1.69
TDA3YHR009C ARC1P46672 376 aaKnown RBP4.49□□□□□ -1.69
TDA3YHR009C PRP43P53131 767 aaKnown RBP4.49□□□□□ -1.69
TDA3YHR009C DUO1P53168 247 aaKnown RBP4.49□□□□□ -1.69
TDA3YHR009C YSA1Q01976 231 aa4.49□□□□□ -1.69
TDA3YHR009C USA1Q03714 838 aa4.49□□□□□ -1.69
TDA3YHR009C TAF11Q04226 346 aa4.49□□□□□ -1.69
TDA3YHR009C YLR287CQ05881 355 aa4.49□□□□□ -1.69
TDA3YHR009C STP3Q05937 343 aa4.49□□□□□ -1.69
TDA3YHR009C YSH1Q06224 779 aaPredicted RBP4.49□□□□□ -1.69
TDA3YHR009C VIP1Q06685 1146 aaKnown RBP4.49□□□□□ -1.69
TDA3YHR009C TMA16Q08687 178 aa4.49□□□□□ -1.69
TDA3YHR009C SCM3Q12334 223 aa4.49□□□□□ -1.69
TDA3YHR009C CDC24P11433 854 aaPredicted RBP4.48□□□□□ -1.69
TDA3YHR009C ERG8P24521 451 aa4.48□□□□□ -1.69
TDA3YHR009C PGS1P25578 521 aa4.48□□□□□ -1.69
TDA3YHR009C URK1P27515 501 aa4.48□□□□□ -1.69
TDA3YHR009C SDH8P38345 138 aa4.48□□□□□ -1.69
TDA3YHR009C NPR2P39923 615 aa4.48□□□□□ -1.69
TDA3YHR009C BUD16P39988 312 aa4.48□□□□□ -1.69
TDA3YHR009C AVT1P47082 602 aa4.48□□□□□ -1.69
TDA3YHR009C VPS4P52917 437 aa4.48□□□□□ -1.69
TDA3YHR009C YGR151CP53287 111 aa4.48□□□□□ -1.69
TDA3YHR009C MFB1Q04922 465 aa4.48□□□□□ -1.69
TDA3YHR009C USV1Q12132 391 aa4.48□□□□□ -1.69
TDA3YHR009C HSH49Q99181 213 aaPredicted RBP4.48□□□□□ -1.69
TDA3YHR009C ALG7P07286 448 aa4.48□□□□□ -1.69
TDA3YHR009C ABF1P14164 731 aa4.48□□□□□ -1.69
TDA3YHR009C THI80P35202 319 aa4.48□□□□□ -1.69
TDA3YHR009C GEX2P36173 615 aa4.48□□□□□ -1.69
TDA3YHR009C RMD8P43620 662 aa4.48□□□□□ -1.69
TDA3YHR009C ASE1P50275 885 aa4.48□□□□□ -1.69
TDA3YHR009C SNF12P53628 566 aa4.48□□□□□ -1.69
TDA3YHR009C MTG1Q03151 367 aaPredicted RBP4.48□□□□□ -1.69
TDA3YHR009C ENT4Q07872 247 aa4.48□□□□□ -1.69
TDA3YHR009C YOR111WQ99210 232 aa4.48□□□□□ -1.69
TDA3YHR009C VCX1Q99385 411 aa4.48□□□□□ -1.69
TDA3YHR009C SUI3P09064 285 aaKnown RBP4.47□□□□□ -1.69
TDA3YHR009C TDP1P38319 544 aa4.47□□□□□ -1.69
TDA3YHR009C MPT5P39016 859 aaKnown RBP RIP-Chip data4.47□□□□□ -1.69not detected
TDA3YHR009C TPA1P40032 644 aaKnown RBP4.47□□□□□ -1.69
TDA3YHR009C IRC24P40580 263 aa4.47□□□□□ -1.69
TDA3YHR009C PHO23P50947 330 aa4.47□□□□□ -1.69
TDA3YHR009C DIP5P53388 608 aa4.47□□□□□ -1.69
TDA3YHR009C RNT1Q02555 471 aa4.47□□□□□ -1.69
TDA3YHR009C MFM1Q02783 413 aa4.47□□□□□ -1.69
TDA3YHR009C NUS1Q12063 375 aa4.47□□□□□ -1.69
TDA3YHR009C HUA2Q12134 243 aa4.47□□□□□ -1.69
TDA3YHR009C SPO16P17122 198 aa4.46□□□□□ -1.7
TDA3YHR009C CDC5P32562 705 aa4.46□□□□□ -1.7
TDA3YHR009C DAK1P54838 584 aaKnown RBP4.46□□□□□ -1.7
TDA3YHR009C RPS15Q01855 142 aaKnown RBP4.46□□□□□ -1.7
TDA3YHR009C RAD30Q04049 632 aa4.46□□□□□ -1.7
TDA3YHR009C UTP21Q06078 939 aaPredicted RBP4.46□□□□□ -1.7
TDA3YHR009C PSK2Q08217 1101 aa4.46□□□□□ -1.7
TDA3YHR009C AIM39Q08223 395 aa4.46□□□□□ -1.7
TDA3YHR009C RKI1Q12189 258 aa4.46□□□□□ -1.7
TDA3YHR009C ERG27Q12452 347 aaKnown RBP4.46□□□□□ -1.7
TDA3YHR009C YBR126W-AQ8TGU7 68 aa4.46□□□□□ -1.7
TDA3YHR009C GCN4P03069 281 aa4.45□□□□□ -1.7
TDA3YHR009C PPR1P07272 904 aaPredicted RBP4.45□□□□□ -1.7
TDA3YHR009C FUR1P18562 216 aaKnown RBP4.45□□□□□ -1.7
TDA3YHR009C YCK1P23291 538 aa4.45□□□□□ -1.7
TDA3YHR009C HRR25P29295 494 aaKnown RBP4.45□□□□□ -1.7
TDA3YHR009C NPL6P32832 435 aa4.45□□□□□ -1.7
TDA3YHR009C ALY1P36117 915 aa4.45□□□□□ -1.7
TDA3YHR009C CCL1P37366 393 aa4.45□□□□□ -1.7
TDA3YHR009C APL3P38065 1025 aa4.45□□□□□ -1.7
TDA3YHR009C KSP1P38691 1029 aaKnown RBP4.45□□□□□ -1.7
TDA3YHR009C ARO9P38840 513 aaPredicted RBP4.45□□□□□ -1.7
TDA3YHR009C YJL206CP39529 758 aa4.45□□□□□ -1.7
TDA3YHR009C YIL161WP40449 235 aaKnown RBP4.45□□□□□ -1.7
TDA3YHR009C AAD10P47182 288 aa4.45□□□□□ -1.7
TDA3YHR009C NMA2P53204 395 aa4.45□□□□□ -1.7
TDA3YHR009C FCP1Q03254 732 aa4.45□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 52.7 ms