RNA–Protein interactions for RNA: YGR247W

CPD1, Transcript of Cyclic nucleotide phosphodiesterase, yeastyeast

Gene CPD1, Length 720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CPD1YGR247W NBP35P52920 328 aa9.21□□□□□ -0.94
CPD1YGR247W RPL34AP87262 121 aaPredicted RBP9.21□□□□□ -0.94
CPD1YGR247W TRE2Q08693 809 aa9.21□□□□□ -0.94
CPD1YGR247W AFI1Q99222 893 aa9.21□□□□□ -0.94
CPD1YGR247W TRX1P22217 103 aaKnown RBP9.2□□□□□ -0.94
CPD1YGR247W MSH3P25336 1018 aa9.2□□□□□ -0.94
CPD1YGR247W VPS24P36095 224 aaKnown RBP9.2□□□□□ -0.94
CPD1YGR247W ELO1P39540 310 aa9.2□□□□□ -0.94
CPD1YGR247W ERP2P39704 215 aa9.2□□□□□ -0.94
CPD1YGR247W PAN6P40459 309 aa9.2□□□□□ -0.94
CPD1YGR247W MNN11P46985 422 aaKnown RBP9.2□□□□□ -0.94
CPD1YGR247W TCB2P48231 1178 aa9.2□□□□□ -0.94
CPD1YGR247W CSL4P53859 292 aaPredicted RBP9.2□□□□□ -0.94
CPD1YGR247W CDC55Q00362 526 aa9.2□□□□□ -0.94
CPD1YGR247W YDR131CQ03899 556 aa9.2□□□□□ -0.94
CPD1YGR247W TFB4Q12004 338 aa9.2□□□□□ -0.94
CPD1YGR247W SUL2Q12325 893 aa9.2□□□□□ -0.94
CPD1YGR247W GPM3Q12326 303 aa9.2□□□□□ -0.94
CPD1YGR247W TRM1P15565 570 aaKnown RBP9.19□□□□□ -0.94
CPD1YGR247W PMA2P19657 947 aa9.19□□□□□ -0.94
CPD1YGR247W DAL82P21705 255 aa9.19□□□□□ -0.94
CPD1YGR247W PAT1P25644 796 aaKnown RBP9.19□□□□□ -0.94
CPD1YGR247W YKL050CP35736 922 aa9.19□□□□□ -0.94
CPD1YGR247W YHL041WP38730 149 aa9.19□□□□□ -0.94
CPD1YGR247W RVS167P39743 482 aaKnown RBP9.19□□□□□ -0.94
CPD1YGR247W VFA1P40080 203 aa9.19□□□□□ -0.94
CPD1YGR247W SPC105P53148 917 aa9.19□□□□□ -0.94
CPD1YGR247W YNL247WP53852 767 aaKnown RBP9.19□□□□□ -0.94
CPD1YGR247W YKR104WP0CE69 306 aa9.18□□□□□ -0.94
CPD1YGR247W SCH9P11792 824 aaKnown RBP9.18□□□□□ -0.94
CPD1YGR247W SNT1P25357 1226 aa9.18□□□□□ -0.94
CPD1YGR247W SEC65P29478 273 aa9.18□□□□□ -0.94
CPD1YGR247W JNM1P36224 373 aa9.18□□□□□ -0.94
CPD1YGR247W RPS10BP46784 105 aaKnown RBP9.18□□□□□ -0.94
CPD1YGR247W SET2P46995 733 aaKnown RBP9.18□□□□□ -0.94
CPD1YGR247W SWC7Q06707 132 aa9.18□□□□□ -0.94
CPD1YGR247W RPS10AQ08745 105 aaPredicted RBP9.18□□□□□ -0.94
CPD1YGR247W IZH4Q99393 312 aa9.18□□□□□ -0.94
CPD1YGR247W GFA1P14742 717 aaKnown RBP9.17□□□□□ -0.94
CPD1YGR247W AAT2P23542 418 aaKnown RBP9.17□□□□□ -0.94
CPD1YGR247W ALY1P36117 915 aa9.17□□□□□ -0.94
CPD1YGR247W MSR1P38714 643 aa9.17□□□□□ -0.94
CPD1YGR247W RRT5P43607 289 aa9.17□□□□□ -0.94
CPD1YGR247W TRF5P48561 642 aaKnown RBP9.17□□□□□ -0.94
CPD1YGR247W YGR266WP53326 701 aa9.17□□□□□ -0.94
CPD1YGR247W YLR287CQ05881 355 aa9.17□□□□□ -0.94
CPD1YGR247W YDR061WQ12298 539 aa9.17□□□□□ -0.94
CPD1YGR247W EFG1Q3E705 233 aaKnown RBP9.17□□□□□ -0.94
CPD1YGR247W YOR338WQ99326 363 aa9.17□□□□□ -0.94
CPD1YGR247W INH1P01097 85 aa9.16□□□□□ -0.94
CPD1YGR247W ABF1P14164 731 aa9.16□□□□□ -0.94
CPD1YGR247W CWP1P28319 239 aa9.16□□□□□ -0.94
CPD1YGR247W UBS1P38290 277 aa9.16□□□□□ -0.94
CPD1YGR247W BIT2P38346 545 aa9.16□□□□□ -0.94
CPD1YGR247W LRP1P38801 184 aaKnown RBP9.16□□□□□ -0.94
CPD1YGR247W SMC2P38989 1170 aaKnown RBP9.16□□□□□ -0.94
CPD1YGR247W SIP4P46954 829 aa9.16□□□□□ -0.94
CPD1YGR247W NRD1P53617 575 aaKnown RBP RIP-Chip data9.16□□□□□ -0.94 RIP-Chip
CPD1YGR247W YNL040WP53960 456 aaPredicted RBP9.16□□□□□ -0.94
CPD1YGR247W UME1Q03010 460 aa9.16□□□□□ -0.94
CPD1YGR247W YLL032CQ07834 825 aaKnown RBP RIP-Chip data9.16□□□□□ -0.94not detected
CPD1YGR247W CMS1Q07897 291 aaKnown RBP9.16□□□□□ -0.94
CPD1YGR247W SEY1Q99287 776 aa9.16□□□□□ -0.94
CPD1YGR247W ATE1P16639 503 aa9.15□□□□□ -0.94
CPD1YGR247W NCL1P38205 684 aaKnown RBP9.15□□□□□ -0.94
CPD1YGR247W AIM18P38884 321 aa9.15□□□□□ -0.94
CPD1YGR247W TEP1P53916 434 aa9.15□□□□□ -0.94
CPD1YGR247W VPS9P54787 451 aa9.15□□□□□ -0.94
CPD1YGR247W YDR444WQ04093 687 aa9.15□□□□□ -0.94
CPD1YGR247W TPO1Q07824 586 aa9.15□□□□□ -0.94
CPD1YGR247W YOR389WQ08912 624 aa9.15□□□□□ -0.94
CPD1YGR247W PGC1Q08959 321 aa9.15□□□□□ -0.94
CPD1YGR247W YPL278CQ08990 100 aa9.15□□□□□ -0.94
CPD1YGR247W SKM1Q12469 655 aa9.15□□□□□ -0.94
CPD1YGR247W HFA1P32874 2273 aa9.14□□□□□ -0.95
CPD1YGR247W PDR1P12383 1068 aa9.14□□□□□ -0.95
CPD1YGR247W CLC1P17891 233 aa9.14□□□□□ -0.95
CPD1YGR247W KHA1P40309 873 aa9.14□□□□□ -0.95
CPD1YGR247W MVP1P40959 511 aaKnown RBP9.14□□□□□ -0.95
CPD1YGR247W YNL143CP53908 130 aa9.14□□□□□ -0.95
CPD1YGR247W VAC7P53950 1165 aa9.14□□□□□ -0.95
CPD1YGR247W OCA6Q12454 224 aa9.14□□□□□ -0.95
CPD1YGR247W SEC23P15303 768 aaKnown RBP9.13□□□□□ -0.95
CPD1YGR247W RPN12P32496 274 aa9.13□□□□□ -0.95
CPD1YGR247W SRP72P38688 640 aaKnown RBP9.13□□□□□ -0.95
CPD1YGR247W IST3P40565 148 aaPredicted RBP9.13□□□□□ -0.95
CPD1YGR247W MKT1P40850 830 aaKnown RBP9.13□□□□□ -0.95
CPD1YGR247W TFG2P41896 400 aaPredicted RBP9.13□□□□□ -0.95
CPD1YGR247W ROK1P45818 564 aaPredicted RBP9.13□□□□□ -0.95
CPD1YGR247W NUP85P46673 744 aa9.13□□□□□ -0.95
CPD1YGR247W RFX1P48743 811 aa9.13□□□□□ -0.95
CPD1YGR247W PCL10P53124 433 aa9.13□□□□□ -0.95
CPD1YGR247W BNI4P53858 892 aa9.13□□□□□ -0.95
CPD1YGR247W TGL2P54857 326 aa9.13□□□□□ -0.95
CPD1YGR247W SYH1Q02875 849 aaKnown RBP9.13□□□□□ -0.95
CPD1YGR247W ENT5Q03769 411 aaKnown RBP9.13□□□□□ -0.95
CPD1YGR247W POB3Q04636 552 aaKnown RBP9.13□□□□□ -0.95
CPD1YGR247W IVY1Q04934 453 aa9.13□□□□□ -0.95
CPD1YGR247W CSF1Q12150 2958 aa9.13□□□□□ -0.95
CPD1YGR247W PRP8P33334 2413 aaKnown RBP9.12□□□□□ -0.95
Retrieved 100 of 5,963 RNA–protein pairs in 58.8 ms