RNA–Protein interactions for RNA: YGR075C

PRP38, Transcript of Unique component of the U4/U6.U5 tri-snRNP particle, yeast

Gene PRP38, Length 729 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PRP38	YGR075C	CFD1	P40558	293 aa		4.06	□□□□□ -1.76
PRP38	YGR075C	MEP2	P41948	499 aa		4.06	□□□□□ -1.76
PRP38	YGR075C	STB2	P46679	850 aa		4.06	□□□□□ -1.76
PRP38	YGR075C	COG6	P53959	839 aa		4.06	□□□□□ -1.76
PRP38	YGR075C	SNU56	Q03782	492 aa	Known RBP	4.06	□□□□□ -1.76
PRP38	YGR075C	PSF3	Q12146	194 aa		4.06	□□□□□ -1.76
PRP38	YGR075C	DBP10	Q12389	995 aa	Known RBP	4.06	□□□□□ -1.76
PRP38	YGR075C	YPT1	P01123	206 aa	Known RBP	4.05	□□□□□ -1.76
PRP38	YGR075C	YCR061W	P25639	631 aa		4.05	□□□□□ -1.76
PRP38	YGR075C	PRE2	P30656	287 aa	Known RBP	4.05	□□□□□ -1.76
PRP38	YGR075C	SAP1	P39955	897 aa	Known RBP	4.05	□□□□□ -1.76
PRP38	YGR075C	LAS21	P40367	830 aa		4.05	□□□□□ -1.76
PRP38	YGR075C	CIN1	P40987	1014 aa		4.05	□□□□□ -1.76
PRP38	YGR075C	CIR1	P42940	261 aa		4.05	□□□□□ -1.76
PRP38	YGR075C	IDS2	P46958	469 aa		4.05	□□□□□ -1.76
PRP38	YGR075C	PLM2	Q04383	521 aa		4.05	□□□□□ -1.76
PRP38	YGR075C	SLX4	Q12098	748 aa		4.05	□□□□□ -1.76
PRP38	YGR075C	KAR1	P11927	433 aa		4.04	□□□□□ -1.76
PRP38	YGR075C	YCP4	P25349	247 aa	Known RBP	4.04	□□□□□ -1.76
PRP38	YGR075C	KES1	P35844	434 aa	Known RBP	4.04	□□□□□ -1.76
PRP38	YGR075C	PXL1	P36166	706 aa		4.04	□□□□□ -1.76
PRP38	YGR075C	RRP8	P38961	392 aa	Known RBP	4.04	□□□□□ -1.76
PRP38	YGR075C	RAD26	P40352	1085 aa		4.04	□□□□□ -1.76
PRP38	YGR075C	TRS31	Q03337	283 aa		4.04	□□□□□ -1.76
PRP38	YGR075C	YML053C	Q04978	212 aa		4.04	□□□□□ -1.76
PRP38	YGR075C	ENT2	Q05785	613 aa		4.04	□□□□□ -1.76
PRP38	YGR075C	YDL242W	Q07746	117 aa		4.04	□□□□□ -1.76
PRP38	YGR075C	LYS21	Q12122	440 aa	Known RBP	4.04	□□□□□ -1.76
PRP38	YGR075C	GAL4	P04386	881 aa		4.03	□□□□□ -1.76
PRP38	YGR075C	TFC4	P33339	1025 aa		4.03	□□□□□ -1.76
PRP38	YGR075C	RPL15B	P54780	204 aa	Predicted RBP	4.03	□□□□□ -1.76
PRP38	YGR075C	PHM6	Q05637	104 aa		4.03	□□□□□ -1.76
PRP38	YGR075C	YER175W-A	Q8TGU4	54 aa		4.03	□□□□□ -1.76
PRP38	YGR075C	SES1	P07284	462 aa	Known RBP	4.02	□□□□□ -1.77
PRP38	YGR075C	FLO5	P38894	1075 aa		4.02	□□□□□ -1.77
PRP38	YGR075C	ERV46	P39727	415 aa		4.02	□□□□□ -1.77
PRP38	YGR075C	GET3	Q12154	354 aa	Known RBP	4.02	□□□□□ -1.77
PRP38	YGR075C	AIM44	Q99299	758 aa		4.02	□□□□□ -1.77
PRP38	YGR075C	KGD2	P19262	463 aa	Predicted RBP	4.01	□□□□□ -1.77
PRP38	YGR075C	PHO3	P24031	467 aa		4.01	□□□□□ -1.77
PRP38	YGR075C	MGM1	P32266	881 aa		4.01	□□□□□ -1.77
PRP38	YGR075C	LNP1	P38878	278 aa		4.01	□□□□□ -1.77
PRP38	YGR075C	SCS2	P40075	244 aa	Known RBP	4.01	□□□□□ -1.77
PRP38	YGR075C	VFA1	P40080	203 aa		4.01	□□□□□ -1.77
PRP38	YGR075C	NOP2	P40991	618 aa	Known RBP	4.01	□□□□□ -1.77
PRP38	YGR075C	POL31	P46957	487 aa		4.01	□□□□□ -1.77
PRP38	YGR075C	YNL058C	P53947	316 aa		4.01	□□□□□ -1.77
PRP38	YGR075C	ARA2	Q04212	335 aa		4.01	□□□□□ -1.77
PRP38	YGR075C	MRPL1	Q04599	285 aa		4.01	□□□□□ -1.77
PRP38	YGR075C	TRI1	Q05024	226 aa		4.01	□□□□□ -1.77
PRP38	YGR075C	PFA4	Q12006	378 aa		4.01	□□□□□ -1.77
PRP38	YGR075C	ILS1	P09436	1072 aa	Known RBP	4	□□□□□ -1.77
PRP38	YGR075C	AIM17	P23180	465 aa	Known RBP	4	□□□□□ -1.77
PRP38	YGR075C	RPS7A	P26786	190 aa	Known RBP	4	□□□□□ -1.77
PRP38	YGR075C	IMA5	P40884	581 aa		4	□□□□□ -1.77
PRP38	YGR075C	PUS4	P48567	403 aa	Known RBP	4	□□□□□ -1.77
PRP38	YGR075C	CRF1	Q04930	467 aa		4	□□□□□ -1.77
PRP38	YGR075C	YOR389W	Q08912	624 aa		4	□□□□□ -1.77
PRP38	YGR075C	NUR1	Q12066	484 aa		4	□□□□□ -1.77
PRP38	YGR075C	RPT3	P33298	428 aa	Known RBP	3.99	□□□□□ -1.77
PRP38	YGR075C	TGL1	P34163	548 aa		3.99	□□□□□ -1.77
PRP38	YGR075C	ARB1	P40024	610 aa	Known RBP	3.99	□□□□□ -1.77
PRP38	YGR075C	UBP7	P40453	1071 aa		3.99	□□□□□ -1.77
PRP38	YGR075C	LYS20	P48570	428 aa	Known RBP	3.99	□□□□□ -1.77
PRP38	YGR075C	PEX14	P53112	341 aa		3.99	□□□□□ -1.77
PRP38	YGR075C	LSC1	P53598	329 aa	Known RBP	3.99	□□□□□ -1.77
PRP38	YGR075C	GSH1	P32477	678 aa		3.98	□□□□□ -1.77
PRP38	YGR075C	ATO2	P32907	282 aa		3.98	□□□□□ -1.77
PRP38	YGR075C	PAF1	P38351	445 aa		3.98	□□□□□ -1.77
PRP38	YGR075C	GND1	P38720	489 aa	Known RBP	3.98	□□□□□ -1.77
PRP38	YGR075C	ERC1	P38767	581 aa		3.98	□□□□□ -1.77
PRP38	YGR075C	YAT1	P80235	687 aa		3.98	□□□□□ -1.77
PRP38	YGR075C	ACS1	Q01574	713 aa		3.98	□□□□□ -1.77
PRP38	YGR075C	AAT1	Q01802	451 aa		3.98	□□□□□ -1.77
PRP38	YGR075C	NUP53	Q03790	475 aa		3.98	□□□□□ -1.77
PRP38	YGR075C	VAS1	P07806	1104 aa	Known RBP	3.97	□□□□□ -1.77
PRP38	YGR075C	ADH4	P10127	382 aa		3.97	□□□□□ -1.77
PRP38	YGR075C	YLF2	P38746	405 aa		3.97	□□□□□ -1.77
PRP38	YGR075C	VBA2	P38358	474 aa	Known RBP	3.96	□□□□□ -1.78
PRP38	YGR075C	TOM71	P38825	639 aa	Known RBP	3.96	□□□□□ -1.78
PRP38	YGR075C	MDV1	P47025	714 aa		3.96	□□□□□ -1.78
PRP38	YGR075C	VTC3	Q02725	835 aa		3.96	□□□□□ -1.78
PRP38	YGR075C	SNA4	Q07549	140 aa		3.96	□□□□□ -1.78
PRP38	YGR075C	YPL191C	Q08930	360 aa		3.96	□□□□□ -1.78
PRP38	YGR075C	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	3.96	□□□□□ -1.78	not detected
PRP38	YGR075C	CTT1	P06115	562 aa		3.95	□□□□□ -1.78
PRP38	YGR075C	TAF5	P38129	798 aa		3.95	□□□□□ -1.78
PRP38	YGR075C	SWD1	P39706	426 aa		3.95	□□□□□ -1.78
PRP38	YGR075C	YIL152W	P40455	235 aa		3.95	□□□□□ -1.78
PRP38	YGR075C	YIR016W	P40572	265 aa		3.95	□□□□□ -1.78
PRP38	YGR075C	ESF2	P53743	316 aa	Known RBP	3.95	□□□□□ -1.78
PRP38	YGR075C	CNM67	P53865	581 aa	Known RBP	3.95	□□□□□ -1.78
PRP38	YGR075C	YNL034W	P53963	612 aa		3.95	□□□□□ -1.78
PRP38	YGR075C	BUD7	Q08754	746 aa		3.95	□□□□□ -1.78
PRP38	YGR075C	SEC18	P18759	758 aa	Known RBP	3.94	□□□□□ -1.78
PRP38	YGR075C	CNA1	P23287	553 aa		3.94	□□□□□ -1.78
PRP38	YGR075C	RGT1	P32862	1170 aa		3.94	□□□□□ -1.78
PRP38	YGR075C	SAW1	P39735	261 aa		3.94	□□□□□ -1.78
PRP38	YGR075C	VPS64	Q03944	604 aa		3.94	□□□□□ -1.78
PRP38	YGR075C	CRD1	Q07560	283 aa		3.94	□□□□□ -1.78

Retrieved 100 of 5,963 RNA–protein pairs in 10.9 ms