RNA–Protein interactions for RNA: YGL048C

RPT6, Transcript of ATPase of the 19S regulatory particle of the 26S proteasome, yeastyeast

Gene RPT6, Length 1,218 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPT6YGL048C SFB2P53953 876 aa5.67□□□□□ -1.5
RPT6YGL048C REX2P54964 269 aaKnown RBP5.67□□□□□ -1.5
RPT6YGL048C MZM1Q03429 123 aaPredicted RBP5.67□□□□□ -1.5
RPT6YGL048C NSE5Q03718 556 aa5.67□□□□□ -1.5
RPT6YGL048C EMG1Q06287 252 aaKnown RBP5.67□□□□□ -1.5
RPT6YGL048C CSR1Q06705 408 aaKnown RBP5.67□□□□□ -1.5
RPT6YGL048C TAF10Q12030 206 aa5.67□□□□□ -1.5
RPT6YGL048C NDJ1Q12366 352 aa5.67□□□□□ -1.5
RPT6YGL048C PDH1Q12428 516 aaKnown RBP5.67□□□□□ -1.5
RPT6YGL048C AI5_BETAQ9ZZX0 354 aa5.67□□□□□ -1.5
RPT6YGL048C ATP4P05626 244 aa5.66□□□□□ -1.5
RPT6YGL048C MTF1P14908 341 aaKnown RBP5.66□□□□□ -1.5
RPT6YGL048C SGF29P25554 259 aa5.66□□□□□ -1.5
RPT6YGL048C KIP1P28742 1111 aa5.66□□□□□ -1.5
RPT6YGL048C EFB1P32471 206 aaKnown RBP5.66□□□□□ -1.5
RPT6YGL048C CBF2P32504 956 aa5.66□□□□□ -1.5
RPT6YGL048C CSG2P35206 410 aa5.66□□□□□ -1.5
RPT6YGL048C RPC25P35718 212 aa5.66□□□□□ -1.5
RPT6YGL048C PSY4P38193 441 aa5.66□□□□□ -1.5
RPT6YGL048C MCX1P38323 520 aaPredicted RBP5.66□□□□□ -1.5
RPT6YGL048C BFR1P38934 470 aaKnown RBP RIP-Chip data5.66□□□□□ -1.5not detected
RPT6YGL048C RVS167P39743 482 aaKnown RBP5.66□□□□□ -1.5
RPT6YGL048C YER034WP40022 185 aaKnown RBP5.66□□□□□ -1.5
RPT6YGL048C PSY2P40164 858 aa5.66□□□□□ -1.5
RPT6YGL048C BTT1P40314 149 aaPredicted RBP5.66□□□□□ -1.5
RPT6YGL048C IRR1P40541 1150 aa5.66□□□□□ -1.5
RPT6YGL048C MDJ2P42834 146 aa5.66□□□□□ -1.5
RPT6YGL048C YJR120WP47157 116 aa5.66□□□□□ -1.5
RPT6YGL048C COS5P47187 383 aa5.66□□□□□ -1.5
RPT6YGL048C UTP8P53276 713 aaKnown RBP5.66□□□□□ -1.5
RPT6YGL048C LAP3Q01532 483 aaKnown RBP RIP-Chip data5.66□□□□□ -1.5not detected
RPT6YGL048C YHM2Q04013 314 aa5.66□□□□□ -1.5
RPT6YGL048C ECM22Q05958 814 aaPredicted RBP5.66□□□□□ -1.5
RPT6YGL048C SPO75Q07798 868 aa5.66□□□□□ -1.5
RPT6YGL048C NSE1Q07913 336 aa5.66□□□□□ -1.5
RPT6YGL048C TMA16Q08687 178 aa5.66□□□□□ -1.5
RPT6YGL048C TRE1Q08919 783 aa5.66□□□□□ -1.5
RPT6YGL048C YPL191CQ08930 360 aa5.66□□□□□ -1.5
RPT6YGL048C CDC37P06101 506 aaKnown RBP5.65□□□□□ -1.5
RPT6YGL048C SIR1P21691 654 aa5.65□□□□□ -1.5
RPT6YGL048C DAL2P25335 343 aa5.65□□□□□ -1.5
RPT6YGL048C DSS4P32601 143 aa5.65□□□□□ -1.5
RPT6YGL048C YMC2P38087 329 aa5.65□□□□□ -1.5
RPT6YGL048C YBR225WP38321 900 aa5.65□□□□□ -1.5
RPT6YGL048C RRM3P38766 723 aa5.65□□□□□ -1.5
RPT6YGL048C AVT2P39981 480 aa5.65□□□□□ -1.5
RPT6YGL048C RSM25P40496 264 aa5.65□□□□□ -1.5
RPT6YGL048C SBE2P42223 864 aaKnown RBP5.65□□□□□ -1.5
RPT6YGL048C LSB3P43603 459 aaKnown RBP5.65□□□□□ -1.5
RPT6YGL048C ASG7P46993 209 aa5.65□□□□□ -1.5
RPT6YGL048C PUS2P53167 370 aa5.65□□□□□ -1.5
RPT6YGL048C YGL036WP53185 909 aaPredicted RBP5.65□□□□□ -1.5
RPT6YGL048C GCN5Q03330 439 aa5.65□□□□□ -1.5
RPT6YGL048C RRB1Q04225 511 aaKnown RBP5.65□□□□□ -1.5
RPT6YGL048C TMN2Q04562 672 aa5.65□□□□□ -1.5
RPT6YGL048C GFD1Q04839 188 aaKnown RBP5.65□□□□□ -1.5
RPT6YGL048C TDA6Q06466 467 aa5.65□□□□□ -1.5
RPT6YGL048C TSR1Q07381 788 aaKnown RBP5.65□□□□□ -1.5
RPT6YGL048C PIN2Q12057 282 aa5.65□□□□□ -1.5
RPT6YGL048C YPR053CQ6Q5F3 151 aa5.65□□□□□ -1.5
RPT6YGL048C FRT1Q99332 602 aa5.65□□□□□ -1.5
RPT6YGL048C CCH1P50077 2039 aa5.65□□□□□ -1.51
RPT6YGL048C IRA2P19158 3079 aa5.65□□□□□ -1.51
RPT6YGL048C MRPL25P23369 157 aa5.64□□□□□ -1.51
RPT6YGL048C MSP1P28737 362 aa5.64□□□□□ -1.51
RPT6YGL048C NOP4P37838 685 aaKnown RBP5.64□□□□□ -1.51
RPT6YGL048C MIP6P38760 659 aaKnown RBP5.64□□□□□ -1.51
RPT6YGL048C NUP60P39705 539 aa5.64□□□□□ -1.51
RPT6YGL048C SHQ1P40486 507 aaPredicted RBP5.64□□□□□ -1.51
RPT6YGL048C SDS3P40505 327 aa5.64□□□□□ -1.51
RPT6YGL048C MNT3P40549 630 aa5.64□□□□□ -1.51
RPT6YGL048C SAE2P46946 345 aa5.64□□□□□ -1.51
RPT6YGL048C MND1P53102 219 aa5.64□□□□□ -1.51
RPT6YGL048C DRN1P53255 507 aaKnown RBP5.64□□□□□ -1.51
RPT6YGL048C UBX4P54730 416 aa5.64□□□□□ -1.51
RPT6YGL048C YMR187CQ03236 431 aa5.64□□□□□ -1.51
RPT6YGL048C ATG38Q05789 226 aaKnown RBP5.64□□□□□ -1.51
RPT6YGL048C RCL1Q08096 367 aaPredicted RBP5.64□□□□□ -1.51
RPT6YGL048C CWC2Q12046 339 aaPredicted RBP5.64□□□□□ -1.51
RPT6YGL048C VPS54Q12071 889 aa5.64□□□□□ -1.51
RPT6YGL048C YLR125WQ12138 136 aa5.64□□□□□ -1.51
RPT6YGL048C NFI1Q12216 726 aa5.64□□□□□ -1.51
RPT6YGL048C LCB4Q12246 624 aa5.64□□□□□ -1.51
RPT6YGL048C YOL087CQ99247 1116 aa5.64□□□□□ -1.51
RPT6YGL048C MEX67Q99257 599 aaKnown RBP5.64□□□□□ -1.51
RPT6YGL048C GAL1P04385 528 aa5.63□□□□□ -1.51
RPT6YGL048C RPC40P07703 335 aaKnown RBP5.63□□□□□ -1.51
RPT6YGL048C HMG1P12683 1054 aa5.63□□□□□ -1.51
RPT6YGL048C NAR1P23503 491 aaKnown RBP5.63□□□□□ -1.51
RPT6YGL048C HCM1P25364 564 aa5.63□□□□□ -1.51
RPT6YGL048C MCM2P29469 868 aa5.63□□□□□ -1.51
RPT6YGL048C SFP1P32432 683 aa5.63□□□□□ -1.51
RPT6YGL048C MRP4P32902 394 aa5.63□□□□□ -1.51
RPT6YGL048C CBF5P33322 483 aaKnown RBP RIP-Chip data5.63□□□□□ -1.51not detected
RPT6YGL048C SEG2P34250 1132 aa5.63□□□□□ -1.51
RPT6YGL048C NUP120P35729 1037 aa5.63□□□□□ -1.51
RPT6YGL048C BYE1P36106 594 aa5.63□□□□□ -1.51
RPT6YGL048C EXO84P38261 753 aa5.63□□□□□ -1.51
RPT6YGL048C ARB1P40024 610 aaKnown RBP5.63□□□□□ -1.51
RPT6YGL048C YIL161WP40449 235 aaKnown RBP5.63□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 11.3 ms