RNA–Protein interactions for RNA: YFL005W

SEC4, Transcript of Rab family GTPase, yeastyeast

Gene SEC4, Length 648 nt, Biotype protein coding, Subcellular localisation Cellular bud, Endoplasmic reticulum, Nucleus, Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC4YFL005W IML2P47031 731 aa3.78□□□□□ -1.8
SEC4YFL005W SAP4P53036 818 aa3.78□□□□□ -1.8
SEC4YFL005W CPR8P53728 308 aa3.78□□□□□ -1.8
SEC4YFL005W ESF2P53743 316 aaKnown RBP3.78□□□□□ -1.8
SEC4YFL005W SUB1P54000 292 aaKnown RBP3.78□□□□□ -1.8
SEC4YFL005W RPN13O13563 156 aa3.77□□□□□ -1.81
SEC4YFL005W TPK2P06245 380 aa3.77□□□□□ -1.81
SEC4YFL005W YPK1P12688 680 aaKnown RBP3.77□□□□□ -1.81
SEC4YFL005W UBC1P21734 215 aaKnown RBP3.77□□□□□ -1.81
SEC4YFL005W SWC3P31376 625 aa3.77□□□□□ -1.81
SEC4YFL005W BEM3P32873 1128 aa3.77□□□□□ -1.81
SEC4YFL005W YGL117WP53133 265 aa3.77□□□□□ -1.81
SEC4YFL005W COQ6P53318 479 aa3.77□□□□□ -1.81
SEC4YFL005W SEC5P89102 971 aa3.77□□□□□ -1.81
SEC4YFL005W GTR1Q00582 310 aa3.77□□□□□ -1.81
SEC4YFL005W YML131WQ03102 365 aa3.77□□□□□ -1.81
SEC4YFL005W GFD1Q04839 188 aaKnown RBP3.77□□□□□ -1.81
SEC4YFL005W CRF1Q04930 467 aa3.77□□□□□ -1.81
SEC4YFL005W CRT10Q08226 957 aa3.77□□□□□ -1.81
SEC4YFL005W CPA2P03965 1118 aaKnown RBP3.76□□□□□ -1.81
SEC4YFL005W LNP1P38878 278 aa3.76□□□□□ -1.81
SEC4YFL005W YEL020CP39994 560 aa3.76□□□□□ -1.81
SEC4YFL005W RAD26P40352 1085 aa3.76□□□□□ -1.81
SEC4YFL005W YIL166CP40445 542 aa3.76□□□□□ -1.81
SEC4YFL005W ASN1P49089 572 aaKnown RBP3.76□□□□□ -1.81
SEC4YFL005W GLO1P50107 326 aa3.76□□□□□ -1.81
SEC4YFL005W SUL2Q12325 893 aa3.76□□□□□ -1.81
SEC4YFL005W YBR255C-AQ3E776 120 aa3.76□□□□□ -1.81
SEC4YFL005W PET122P10355 254 aa3.75□□□□□ -1.81
SEC4YFL005W STE12P13574 688 aa3.75□□□□□ -1.81
SEC4YFL005W KGD2P19262 463 aaPredicted RBP3.75□□□□□ -1.81
SEC4YFL005W RNR3P21672 869 aaKnown RBP3.75□□□□□ -1.81
SEC4YFL005W SSH4P32343 579 aa3.75□□□□□ -1.81
SEC4YFL005W FLO10P36170 1169 aa3.75□□□□□ -1.81
SEC4YFL005W MAM1P40065 302 aa3.75□□□□□ -1.81
SEC4YFL005W LAS21P40367 830 aa3.75□□□□□ -1.81
SEC4YFL005W THI7Q05998 598 aa3.75□□□□□ -1.81
SEC4YFL005W ARO10Q06408 635 aa3.75□□□□□ -1.81
SEC4YFL005W MRN1Q08925 612 aaKnown RBP RIP-Chip data3.75□□□□□ -1.81not detected
SEC4YFL005W RPA135P22138 1203 aaKnown RBP3.74□□□□□ -1.81
SEC4YFL005W PDE1P22434 369 aa3.74□□□□□ -1.81
SEC4YFL005W SAT4P25333 603 aaKnown RBP3.74□□□□□ -1.81
SEC4YFL005W MRPL9P31334 269 aa3.74□□□□□ -1.81
SEC4YFL005W GCD7P32502 381 aaPredicted RBP3.74□□□□□ -1.81
SEC4YFL005W UGP1P32861 499 aaKnown RBP3.74□□□□□ -1.81
SEC4YFL005W ARO9P38840 513 aaPredicted RBP3.74□□□□□ -1.81
SEC4YFL005W SKP2P42843 763 aa3.74□□□□□ -1.81
SEC4YFL005W CTF18P49956 741 aa3.74□□□□□ -1.81
SEC4YFL005W MRK1P50873 501 aa3.74□□□□□ -1.81
SEC4YFL005W YNL092WP53934 400 aa3.74□□□□□ -1.81
SEC4YFL005W APM1Q00776 475 aaPredicted RBP3.74□□□□□ -1.81
SEC4YFL005W TFC6Q06339 672 aa3.74□□□□□ -1.81
SEC4YFL005W CSR1Q06705 408 aaKnown RBP3.74□□□□□ -1.81
SEC4YFL005W BUD21Q08492 214 aaPredicted RBP3.74□□□□□ -1.81
SEC4YFL005W SSP2Q08646 371 aa3.74□□□□□ -1.81
SEC4YFL005W YER175W-AQ8TGU4 54 aa3.74□□□□□ -1.81
SEC4YFL005W CHO2P05374 869 aaKnown RBP3.73□□□□□ -1.81
SEC4YFL005W RPL7AP05737 244 aaKnown RBP3.73□□□□□ -1.81
SEC4YFL005W SNF1P06782 633 aaKnown RBP3.73□□□□□ -1.81
SEC4YFL005W PMA2P19657 947 aa3.73□□□□□ -1.81
SEC4YFL005W RER1P25560 188 aa3.73□□□□□ -1.81
SEC4YFL005W NUP120P35729 1037 aa3.73□□□□□ -1.81
SEC4YFL005W RRN3P36070 627 aa3.73□□□□□ -1.81
SEC4YFL005W IFA38P38286 347 aa3.73□□□□□ -1.81
SEC4YFL005W UME6P39001 836 aa3.73□□□□□ -1.81
SEC4YFL005W PAC2P39937 518 aa3.73□□□□□ -1.81
SEC4YFL005W KAP123P40069 1113 aaKnown RBP3.73□□□□□ -1.81
SEC4YFL005W OPT1P40897 799 aa3.73□□□□□ -1.81
SEC4YFL005W MTG1Q03151 367 aaPredicted RBP3.73□□□□□ -1.81
SEC4YFL005W WAR1Q03631 944 aa3.73□□□□□ -1.81
SEC4YFL005W ARG7Q04728 441 aa3.73□□□□□ -1.81
SEC4YFL005W OPY2Q06810 360 aa3.73□□□□□ -1.81
SEC4YFL005W VAM6Q07468 1049 aa3.73□□□□□ -1.81
SEC4YFL005W YDL121CQ07541 149 aa3.73□□□□□ -1.81
SEC4YFL005W RPL7BQ12213 244 aaKnown RBP3.73□□□□□ -1.81
SEC4YFL005W RVB2Q12464 471 aaKnown RBP3.73□□□□□ -1.81
SEC4YFL005W NKP1Q12493 238 aa3.73□□□□□ -1.81
SEC4YFL005W YMR084WA2P2R3 262 aa3.72□□□□□ -1.81
SEC4YFL005W LEU2P04173 364 aaPredicted RBP3.72□□□□□ -1.81
SEC4YFL005W PFK2P16862 959 aaKnown RBP RIP-Chip data3.72□□□□□ -1.81not detected
SEC4YFL005W AMD2P22580 549 aa3.72□□□□□ -1.81
SEC4YFL005W SPO11P23179 398 aa3.72□□□□□ -1.81
SEC4YFL005W URK1P27515 501 aa3.72□□□□□ -1.81
SEC4YFL005W RAD16P31244 790 aa3.72□□□□□ -1.81
SEC4YFL005W SWE1P32944 819 aa3.72□□□□□ -1.81
SEC4YFL005W RPT3P33298 428 aaKnown RBP3.72□□□□□ -1.81
SEC4YFL005W SLC1P33333 303 aa3.72□□□□□ -1.81
SEC4YFL005W MTG2P38860 518 aa3.72□□□□□ -1.81
SEC4YFL005W VPS8P39702 1274 aa3.72□□□□□ -1.81
SEC4YFL005W BUD16P39988 312 aa3.72□□□□□ -1.81
SEC4YFL005W VID27P40157 782 aa3.72□□□□□ -1.81
SEC4YFL005W YFL015CP43578 164 aa3.72□□□□□ -1.81
SEC4YFL005W ZAP1P47043 880 aa3.72□□□□□ -1.81
SEC4YFL005W BNA1P47096 177 aa3.72□□□□□ -1.81
SEC4YFL005W UBP16Q02863 499 aa3.72□□□□□ -1.81
SEC4YFL005W SVL3Q03088 825 aaKnown RBP3.72□□□□□ -1.81
SEC4YFL005W VID22Q05934 901 aa3.72□□□□□ -1.81
SEC4YFL005W YDL242WQ07746 117 aa3.72□□□□□ -1.81
SEC4YFL005W TPK1P06244 397 aa3.71□□□□□ -1.82
SEC4YFL005W ADE5,7P07244 802 aaKnown RBP3.71□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms