RNA–Protein interactions for RNA: YER052C

HOM3, Transcript of Aspartate kinase (L-aspartate 4-P-transferase), yeast

Gene HOM3, Length 1,584 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HOM3	YER052C	YOR019W	Q99248	730 aa		4.6	□□□□□ -1.67
HOM3	YER052C	SSM4	P40318	1319 aa		4.6	□□□□□ -1.67
HOM3	YER052C	MSS116	P15424	664 aa	Known RBP	4.59	□□□□□ -1.67
HOM3	YER052C	HCA4	P20448	770 aa	Known RBP	4.59	□□□□□ -1.67
HOM3	YER052C	RFA1	P22336	621 aa	Known RBP	4.59	□□□□□ -1.67
HOM3	YER052C	PRD1	P25375	712 aa		4.59	□□□□□ -1.67
HOM3	YER052C	PAP1	P29468	568 aa	Known RBP	4.59	□□□□□ -1.67
HOM3	YER052C	HMX1	P32339	317 aa		4.59	□□□□□ -1.67
HOM3	YER052C	AIM26	P32858	118 aa		4.59	□□□□□ -1.67
HOM3	YER052C	RSM22	P36056	628 aa		4.59	□□□□□ -1.67
HOM3	YER052C	MUD2	P36084	527 aa	Known RBP	4.59	□□□□□ -1.67
HOM3	YER052C	YBR238C	P38330	731 aa	Known RBP	4.59	□□□□□ -1.67
HOM3	YER052C	MSG5	P38590	489 aa		4.59	□□□□□ -1.67
HOM3	YER052C	TOM71	P38825	639 aa	Known RBP	4.59	□□□□□ -1.67
HOM3	YER052C	SLN1	P39928	1220 aa	Predicted RBP	4.59	□□□□□ -1.67
HOM3	YER052C	YJL068C	P40363	299 aa		4.59	□□□□□ -1.67
HOM3	YER052C	ERR3	P42222	437 aa		4.59	□□□□□ -1.67
HOM3	YER052C	UPF3	P48412	387 aa	Known RBP	4.59	□□□□□ -1.67
HOM3	YER052C	BPL1	P48445	690 aa	Predicted RBP	4.59	□□□□□ -1.67
HOM3	YER052C	PCL10	P53124	433 aa		4.59	□□□□□ -1.67
HOM3	YER052C	YGR054W	P53235	642 aa	Known RBP	4.59	□□□□□ -1.67
HOM3	YER052C	CIK1	Q01649	594 aa		4.59	□□□□□ -1.67
HOM3	YER052C	RTN1	Q04947	295 aa	Known RBP	4.59	□□□□□ -1.67
HOM3	YER052C	RSC3	Q06639	885 aa		4.59	□□□□□ -1.67
HOM3	YER052C	BRE4	Q07660	1125 aa		4.59	□□□□□ -1.67
HOM3	YER052C	MET7	Q08645	548 aa		4.59	□□□□□ -1.67
HOM3	YER052C	RPS3	P05750	240 aa	Known RBP	4.58	□□□□□ -1.68
HOM3	YER052C	RAD18	P10862	487 aa		4.58	□□□□□ -1.68
HOM3	YER052C	BIK1	P11709	440 aa		4.58	□□□□□ -1.68
HOM3	YER052C	THR1	P17423	357 aa	Known RBP	4.58	□□□□□ -1.68
HOM3	YER052C	CKA2	P19454	339 aa		4.58	□□□□□ -1.68
HOM3	YER052C	YCK2	P23292	546 aa	Known RBP	4.58	□□□□□ -1.68
HOM3	YER052C	SPS22	P25380	463 aa		4.58	□□□□□ -1.68
HOM3	YER052C	MEI5	P32489	222 aa		4.58	□□□□□ -1.68
HOM3	YER052C	PAH1	P32567	862 aa		4.58	□□□□□ -1.68
HOM3	YER052C	XRS2	P33301	854 aa		4.58	□□□□□ -1.68
HOM3	YER052C	RFC5	P38251	354 aa		4.58	□□□□□ -1.68
HOM3	YER052C	SHC1	P39000	512 aa		4.58	□□□□□ -1.68
HOM3	YER052C	SEC26	P41810	973 aa	Known RBP	4.58	□□□□□ -1.68
HOM3	YER052C	OYE3	P41816	400 aa	Predicted RBP	4.58	□□□□□ -1.68
HOM3	YER052C	CAF16	P43569	289 aa		4.58	□□□□□ -1.68
HOM3	YER052C	MIG2	P53035	382 aa		4.58	□□□□□ -1.68
HOM3	YER052C	YGR067C	P53243	804 aa		4.58	□□□□□ -1.68
HOM3	YER052C	FUS2	Q05670	677 aa		4.58	□□□□□ -1.68
HOM3	YER052C	YCG1	Q06680	1035 aa		4.58	□□□□□ -1.68
HOM3	YER052C	YLR001C	Q07895	862 aa		4.58	□□□□□ -1.68
HOM3	YER052C	KEL3	Q08979	651 aa	Predicted RBP	4.58	□□□□□ -1.68
HOM3	YER052C	FRE6	Q12473	712 aa		4.58	□□□□□ -1.68
HOM3	YER052C	SEC39	Q12745	709 aa		4.58	□□□□□ -1.68
HOM3	YER052C	KIN2	P13186	1147 aa	Known RBP	4.57	□□□□□ -1.68
HOM3	YER052C	ENA1	P13587	1091 aa		4.57	□□□□□ -1.68
HOM3	YER052C	PFK1	P16861	987 aa	Known RBP	4.57	□□□□□ -1.68
HOM3	YER052C	DAL7	P21826	554 aa		4.57	□□□□□ -1.68
HOM3	YER052C	RRP43	P25359	394 aa	Predicted RBP	4.57	□□□□□ -1.68
HOM3	YER052C	SED4	P25365	1065 aa		4.57	□□□□□ -1.68
HOM3	YER052C	CBF2	P32504	956 aa		4.57	□□□□□ -1.68
HOM3	YER052C	MGM101	P32787	269 aa	Known RBP	4.57	□□□□□ -1.68
HOM3	YER052C	SEG2	P34250	1132 aa		4.57	□□□□□ -1.68
HOM3	YER052C	LAS1	P36146	502 aa	Predicted RBP	4.57	□□□□□ -1.68
HOM3	YER052C	YBR138C	P38277	524 aa		4.57	□□□□□ -1.68
HOM3	YER052C	PTC7	P38797	343 aa		4.57	□□□□□ -1.68
HOM3	YER052C	PEX7	P39108	375 aa		4.57	□□□□□ -1.68
HOM3	YER052C	KAP123	P40069	1113 aa	Known RBP	4.57	□□□□□ -1.68
HOM3	YER052C	OSW5	P40219	148 aa		4.57	□□□□□ -1.68
HOM3	YER052C	YIR042C	P40586	236 aa		4.57	□□□□□ -1.68
HOM3	YER052C	GTS1	P40956	396 aa		4.57	□□□□□ -1.68
HOM3	YER052C	IAH1	P41734	238 aa		4.57	□□□□□ -1.68
HOM3	YER052C	GCN20	P43535	752 aa	Known RBP	4.57	□□□□□ -1.68
HOM3	YER052C	STU2	P46675	888 aa		4.57	□□□□□ -1.68
HOM3	YER052C	YKE2	P52553	114 aa		4.57	□□□□□ -1.68
HOM3	YER052C	AIM14	P53109	570 aa		4.57	□□□□□ -1.68
HOM3	YER052C	PXR1	P53335	271 aa	Predicted RBP	4.57	□□□□□ -1.68
HOM3	YER052C	BRE5	P53741	515 aa	Known RBP	4.57	□□□□□ -1.68
HOM3	YER052C	NOG2	P53742	486 aa	Known RBP	4.57	□□□□□ -1.68
HOM3	YER052C	SDH1	Q00711	640 aa		4.57	□□□□□ -1.68
HOM3	YER052C	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	4.57	□□□□□ -1.68	not detected
HOM3	YER052C	ENA2	Q01896	1091 aa		4.57	□□□□□ -1.68
HOM3	YER052C	YPL062W	Q02781	134 aa		4.57	□□□□□ -1.68
HOM3	YER052C	UTP21	Q06078	939 aa	Predicted RBP	4.57	□□□□□ -1.68
HOM3	YER052C	SFI1	Q12369	946 aa		4.57	□□□□□ -1.68
HOM3	YER052C	AVL9	Q12500	764 aa		4.57	□□□□□ -1.68
HOM3	YER052C	ENA5	Q12691	1091 aa		4.57	□□□□□ -1.68
HOM3	YER052C	SWI1	P09547	1314 aa		4.57	□□□□□ -1.68
HOM3	YER052C	LAM4	P38800	1345 aa		4.57	□□□□□ -1.68
HOM3	YER052C	CFT1	Q06632	1357 aa	Known RBP	4.57	□□□□□ -1.68
HOM3	YER052C	MET8	P15807	274 aa		4.57	□□□□□ -1.68
HOM3	YER052C	CBP3	P21560	335 aa		4.57	□□□□□ -1.68
HOM3	YER052C	ZUO1	P32527	433 aa	Known RBP	4.57	□□□□□ -1.68
HOM3	YER052C	PGM1	P33401	570 aa	Known RBP	4.57	□□□□□ -1.68
HOM3	YER052C	RMA1	P36001	430 aa	Known RBP	4.57	□□□□□ -1.68
HOM3	YER052C	KAE1	P36132	386 aa		4.57	□□□□□ -1.68
HOM3	YER052C	SSZ1	P38788	538 aa	Known RBP	4.57	□□□□□ -1.68
HOM3	YER052C	RPN10	P38886	268 aa	Known RBP	4.57	□□□□□ -1.68
HOM3	YER052C	MGS1	P40151	587 aa		4.57	□□□□□ -1.68
HOM3	YER052C	VHR1	P40522	640 aa		4.57	□□□□□ -1.68
HOM3	YER052C	CIR1	P42940	261 aa		4.57	□□□□□ -1.68
HOM3	YER052C	ABM1	P47146	123 aa		4.57	□□□□□ -1.68
HOM3	YER052C	HFM1	P51979	1187 aa		4.57	□□□□□ -1.68
HOM3	YER052C	TEL2	P53038	688 aa		4.57	□□□□□ -1.68
HOM3	YER052C	YNR068C	P53754	272 aa		4.57	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 21.9 ms