RNA–Protein interactions for RNA: YER003C

PMI40, Transcript of Mannose-6-phosphate isomerase, yeast

Gene PMI40, Length 1,290 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PMI40	YER003C	YLR302C	O13544	120 aa		3.87	□□□□□ -1.79
PMI40	YER003C	PPR1	P07272	904 aa	Predicted RBP	3.87	□□□□□ -1.79
PMI40	YER003C	RPB2	P08518	1224 aa	Known RBP	3.87	□□□□□ -1.79
PMI40	YER003C	TY2A-LR1	P0C2J4	438 aa		3.87	□□□□□ -1.79
PMI40	YER003C	TY2A-F	P0CX61	438 aa		3.87	□□□□□ -1.79
PMI40	YER003C	TY2A-GR2	P0CX62	438 aa		3.87	□□□□□ -1.79
PMI40	YER003C	MET8	P15807	274 aa		3.87	□□□□□ -1.79
PMI40	YER003C	TY2A-C	P25383	438 aa		3.87	□□□□□ -1.79
PMI40	YER003C	YCR061W	P25639	631 aa		3.87	□□□□□ -1.79
PMI40	YER003C	FUB1	P25659	250 aa		3.87	□□□□□ -1.79
PMI40	YER003C	SAC6	P32599	642 aa	Known RBP	3.87	□□□□□ -1.79
PMI40	YER003C	PHO11	P35842	467 aa		3.87	□□□□□ -1.79
PMI40	YER003C	MRPL7	P36519	292 aa		3.87	□□□□□ -1.79
PMI40	YER003C	UBS1	P38290	277 aa		3.87	□□□□□ -1.79
PMI40	YER003C	SUL1	P38359	859 aa		3.87	□□□□□ -1.79
PMI40	YER003C	PHO12	P38693	467 aa		3.87	□□□□□ -1.79
PMI40	YER003C	SKP2	P42843	763 aa		3.87	□□□□□ -1.79
PMI40	YER003C	VTC2	P43585	828 aa		3.87	□□□□□ -1.79
PMI40	YER003C	IRC6	P43615	237 aa		3.87	□□□□□ -1.79
PMI40	YER003C	ARC1	P46672	376 aa	Known RBP	3.87	□□□□□ -1.79
PMI40	YER003C	ZAP1	P47043	880 aa		3.87	□□□□□ -1.79
PMI40	YER003C	VPS4	P52917	437 aa		3.87	□□□□□ -1.79
PMI40	YER003C	MDG1	P53885	366 aa		3.87	□□□□□ -1.79
PMI40	YER003C	TY2A-DR2	Q03483	438 aa		3.87	□□□□□ -1.79
PMI40	YER003C	HOF1	Q05080	669 aa		3.87	□□□□□ -1.79
PMI40	YER003C	YSH1	Q06224	779 aa	Predicted RBP	3.87	□□□□□ -1.79
PMI40	YER003C	YLR040C	Q07988	224 aa		3.87	□□□□□ -1.79
PMI40	YER003C	PUS9	Q12069	462 aa		3.87	□□□□□ -1.79
PMI40	YER003C	MLH3	Q12083	715 aa		3.87	□□□□□ -1.79
PMI40	YER003C	TY2A-B	Q12260	438 aa		3.87	□□□□□ -1.79
PMI40	YER003C	TY2A-OR2	Q12293	438 aa		3.87	□□□□□ -1.79
PMI40	YER003C	SCM3	Q12334	223 aa		3.87	□□□□□ -1.79
PMI40	YER003C	TY2A-DR1	Q12392	438 aa		3.87	□□□□□ -1.79
PMI40	YER003C	TY2A-OR1	Q12439	438 aa		3.87	□□□□□ -1.79
PMI40	YER003C	TY2A-DR3	Q99303	438 aa		3.87	□□□□□ -1.79
PMI40	YER003C	ATP2	P00830	511 aa	Known RBP	3.86	□□□□□ -1.79
PMI40	YER003C	ALG7	P07286	448 aa		3.86	□□□□□ -1.79
PMI40	YER003C	RPL19A	P0CX82	189 aa	Known RBP	3.86	□□□□□ -1.79
PMI40	YER003C	RPL19B	P0CX83	189 aa	Predicted RBP	3.86	□□□□□ -1.79
PMI40	YER003C	SPO16	P17122	198 aa		3.86	□□□□□ -1.79
PMI40	YER003C	TDP1	P38319	544 aa		3.86	□□□□□ -1.79
PMI40	YER003C	ASE1	P50275	885 aa		3.86	□□□□□ -1.79
PMI40	YER003C	MRPL19	P53875	158 aa		3.86	□□□□□ -1.79
PMI40	YER003C	KIN4	Q01919	800 aa		3.86	□□□□□ -1.79
PMI40	YER003C	USA1	Q03714	838 aa		3.86	□□□□□ -1.79
PMI40	YER003C	YDL086W	Q07505	273 aa		3.86	□□□□□ -1.79
PMI40	YER003C	NUS1	Q12063	375 aa		3.86	□□□□□ -1.79
PMI40	YER003C	TRM13	Q12383	476 aa		3.86	□□□□□ -1.79
PMI40	YER003C	CDC24	P11433	854 aa	Predicted RBP	3.85	□□□□□ -1.79
PMI40	YER003C	THR1	P17423	357 aa	Known RBP	3.85	□□□□□ -1.79
PMI40	YER003C	OLE1	P21147	510 aa	Known RBP	3.85	□□□□□ -1.79
PMI40	YER003C	SGF29	P25554	259 aa		3.85	□□□□□ -1.79
PMI40	YER003C	URK1	P27515	501 aa		3.85	□□□□□ -1.79
PMI40	YER003C	MRP20	P32387	263 aa		3.85	□□□□□ -1.79
PMI40	YER003C	NPL6	P32832	435 aa		3.85	□□□□□ -1.79
PMI40	YER003C	YBR225W	P38321	900 aa		3.85	□□□□□ -1.79
PMI40	YER003C	SDH8	P38345	138 aa		3.85	□□□□□ -1.79
PMI40	YER003C	BUD16	P39988	312 aa		3.85	□□□□□ -1.79
PMI40	YER003C	LYS14	P40971	790 aa		3.85	□□□□□ -1.79
PMI40	YER003C	THI6	P41835	540 aa		3.85	□□□□□ -1.79
PMI40	YER003C	SUN4	P53616	420 aa		3.85	□□□□□ -1.79
PMI40	YER003C	MTG1	Q03151	367 aa	Predicted RBP	3.85	□□□□□ -1.79
PMI40	YER003C	TAF11	Q04226	346 aa		3.85	□□□□□ -1.79
PMI40	YER003C	YLR287C	Q05881	355 aa		3.85	□□□□□ -1.79
PMI40	YER003C	YOL073C	Q08232	322 aa		3.85	□□□□□ -1.79
PMI40	YER003C	ERG27	Q12452	347 aa	Known RBP	3.85	□□□□□ -1.79
PMI40	YER003C	YBR255C-A	Q3E776	120 aa		3.85	□□□□□ -1.79
PMI40	YER003C	PGS1	P25578	521 aa		3.84	□□□□□ -1.79
PMI40	YER003C	GEX2	P36173	615 aa		3.84	□□□□□ -1.79
PMI40	YER003C	APL3	P38065	1025 aa		3.84	□□□□□ -1.79
PMI40	YER003C	RKM3	P38222	552 aa		3.84	□□□□□ -1.79
PMI40	YER003C	YHR097C	P38809	366 aa	Known RBP	3.84	□□□□□ -1.79
PMI40	YER003C	YJL206C	P39529	758 aa		3.84	□□□□□ -1.79
PMI40	YER003C	UBP7	P40453	1071 aa		3.84	□□□□□ -1.79
PMI40	YER003C	DUO1	P53168	247 aa	Known RBP	3.84	□□□□□ -1.79
PMI40	YER003C	TAM41	P53230	385 aa		3.84	□□□□□ -1.79
PMI40	YER003C	YGR151C	P53287	111 aa		3.84	□□□□□ -1.79
PMI40	YER003C	RIA1	P53893	1110 aa		3.84	□□□□□ -1.79
PMI40	YER003C	DAK1	P54838	584 aa	Known RBP	3.84	□□□□□ -1.79
PMI40	YER003C	REG1	Q00816	1014 aa		3.84	□□□□□ -1.79
PMI40	YER003C	YSA1	Q01976	231 aa		3.84	□□□□□ -1.79
PMI40	YER003C	FCP1	Q03254	732 aa		3.84	□□□□□ -1.79
PMI40	YER003C	CRF1	Q04930	467 aa		3.84	□□□□□ -1.79
PMI40	YER003C	ATG23	Q06671	453 aa		3.84	□□□□□ -1.79
PMI40	YER003C	VIP1	Q06685	1146 aa	Known RBP	3.84	□□□□□ -1.79
PMI40	YER003C	TMA16	Q08687	178 aa		3.84	□□□□□ -1.79
PMI40	YER003C	HUA2	Q12134	243 aa		3.84	□□□□□ -1.79
PMI40	YER003C	HSH49	Q99181	213 aa	Predicted RBP	3.84	□□□□□ -1.79
PMI40	YER003C	GCN4	P03069	281 aa		3.83	□□□□□ -1.8
PMI40	YER003C	SEC53	P07283	254 aa	Known RBP	3.83	□□□□□ -1.8
PMI40	YER003C	PDE1	P22434	369 aa		3.83	□□□□□ -1.8
PMI40	YER003C	PRE8	P23639	250 aa		3.83	□□□□□ -1.8
PMI40	YER003C	ERG8	P24521	451 aa		3.83	□□□□□ -1.8
PMI40	YER003C	CDC5	P32562	705 aa		3.83	□□□□□ -1.8
PMI40	YER003C	ELF1	P36053	145 aa		3.83	□□□□□ -1.8
PMI40	YER003C	CCL1	P37366	393 aa		3.83	□□□□□ -1.8
PMI40	YER003C	PSD1	P39006	500 aa		3.83	□□□□□ -1.8
PMI40	YER003C	NPR2	P39923	615 aa		3.83	□□□□□ -1.8
PMI40	YER003C	FMP10	P40098	244 aa		3.83	□□□□□ -1.8
PMI40	YER003C	YIL161W	P40449	235 aa	Known RBP	3.83	□□□□□ -1.8

Retrieved 100 of 5,963 RNA–protein pairs in 9.7 ms