RNA–Protein interactions for RNA: YDR494W

RSM28, Transcript of Mitochondrial ribosomal protein of the small subunit, yeast

Gene RSM28, Length 1,086 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSM28	YDR494W	LSC1	P53598	329 aa	Known RBP	3.82	□□□□□ -1.8
RSM28	YDR494W	COP1	P53622	1201 aa	Known RBP	3.82	□□□□□ -1.8
RSM28	YDR494W	CNM67	P53865	581 aa	Known RBP	3.82	□□□□□ -1.8
RSM28	YDR494W	CRT10	Q08226	957 aa		3.82	□□□□□ -1.8
RSM28	YDR494W	DBP10	Q12389	995 aa	Known RBP	3.82	□□□□□ -1.8
RSM28	YDR494W	CBP3	P21560	335 aa		3.81	□□□□□ -1.8
RSM28	YDR494W	MGM1	P32266	881 aa		3.81	□□□□□ -1.8
RSM28	YDR494W	GDA1	P32621	518 aa		3.81	□□□□□ -1.8
RSM28	YDR494W	TAF5	P38129	798 aa		3.81	□□□□□ -1.8
RSM28	YDR494W	YMR124W	P39523	943 aa	Known RBP	3.81	□□□□□ -1.8
RSM28	YDR494W	CFD1	P40558	293 aa		3.81	□□□□□ -1.8
RSM28	YDR494W	ASK10	P48361	1146 aa		3.81	□□□□□ -1.8
RSM28	YDR494W	RAD33	Q04231	177 aa		3.81	□□□□□ -1.8
RSM28	YDR494W	MRPL1	Q04599	285 aa		3.81	□□□□□ -1.8
RSM28	YDR494W	PNO1	Q99216	274 aa	Known RBP	3.81	□□□□□ -1.8
RSM28	YDR494W	VAS1	P07806	1104 aa	Known RBP	3.8	□□□□□ -1.8
RSM28	YDR494W	TRI1	Q05024	226 aa		3.8	□□□□□ -1.8
RSM28	YDR494W	ENT2	Q05785	613 aa		3.8	□□□□□ -1.8
RSM28	YDR494W	CET1	O13297	549 aa	Predicted RBP	3.79	□□□□□ -1.8
RSM28	YDR494W	YPT1	P01123	206 aa	Known RBP	3.79	□□□□□ -1.8
RSM28	YDR494W	SST2	P11972	698 aa	Known RBP	3.79	□□□□□ -1.8
RSM28	YDR494W	MAK32	P23060	363 aa		3.79	□□□□□ -1.8
RSM28	YDR494W	YKL133C	P36066	463 aa		3.79	□□□□□ -1.8
RSM28	YDR494W	SDH8	P38345	138 aa		3.79	□□□□□ -1.8
RSM28	YDR494W	STB5	P38699	743 aa		3.79	□□□□□ -1.8
RSM28	YDR494W	GSM1	P42950	618 aa		3.79	□□□□□ -1.8
RSM28	YDR494W	TAN1	P53072	289 aa	Predicted RBP	3.79	□□□□□ -1.8
RSM28	YDR494W	NUP53	Q03790	475 aa		3.79	□□□□□ -1.8
RSM28	YDR494W	ADH4	P10127	382 aa		3.78	□□□□□ -1.8
RSM28	YDR494W	YCP4	P25349	247 aa	Known RBP	3.78	□□□□□ -1.8
RSM28	YDR494W	IMD2	P38697	523 aa	Known RBP	3.78	□□□□□ -1.8
RSM28	YDR494W	SWD1	P39706	426 aa		3.78	□□□□□ -1.8
RSM28	YDR494W	PUS4	P48567	403 aa	Known RBP	3.78	□□□□□ -1.8
RSM28	YDR494W	IMD3	P50095	523 aa	Known RBP	3.78	□□□□□ -1.8
RSM28	YDR494W	MET14	Q02196	202 aa		3.78	□□□□□ -1.8
RSM28	YDR494W	NEW1	Q08972	1196 aa	Known RBP	3.78	□□□□□ -1.8
RSM28	YDR494W	NYV1	Q12255	253 aa		3.78	□□□□□ -1.8
RSM28	YDR494W	COQ3	P27680	312 aa		3.77	□□□□□ -1.81
RSM28	YDR494W	FLO5	P38894	1075 aa		3.77	□□□□□ -1.81
RSM28	YDR494W	VFA1	P40080	203 aa		3.77	□□□□□ -1.81
RSM28	YDR494W	IMA5	P40884	581 aa		3.77	□□□□□ -1.81
RSM28	YDR494W	IDS2	P46958	469 aa		3.77	□□□□□ -1.81
RSM28	YDR494W	COS12	P53053	380 aa		3.77	□□□□□ -1.81
RSM28	YDR494W	YNL058C	P53947	316 aa		3.77	□□□□□ -1.81
RSM28	YDR494W	RPL15B	P54780	204 aa	Predicted RBP	3.77	□□□□□ -1.81
RSM28	YDR494W	CEG1	Q01159	459 aa	Predicted RBP	3.77	□□□□□ -1.81
RSM28	YDR494W	ACS1	Q01574	713 aa		3.77	□□□□□ -1.81
RSM28	YDR494W	SNU56	Q03782	492 aa	Known RBP	3.77	□□□□□ -1.81
RSM28	YDR494W	ARP7	Q12406	477 aa		3.77	□□□□□ -1.81
RSM28	YDR494W	GAL1	P04385	528 aa		3.76	□□□□□ -1.81
RSM28	YDR494W	ATP4	P05626	244 aa		3.76	□□□□□ -1.81
RSM28	YDR494W	CTT1	P06115	562 aa		3.76	□□□□□ -1.81
RSM28	YDR494W	GCS1	P35197	352 aa		3.76	□□□□□ -1.81
RSM28	YDR494W	FTH1	P38310	465 aa		3.76	□□□□□ -1.81
RSM28	YDR494W	YLF2	P38746	405 aa		3.76	□□□□□ -1.81
RSM28	YDR494W	CIR1	P42940	261 aa		3.76	□□□□□ -1.81
RSM28	YDR494W	MLC2	Q06580	163 aa		3.76	□□□□□ -1.81
RSM28	YDR494W	YOL057W	Q08225	711 aa		3.76	□□□□□ -1.81
RSM28	YDR494W	YOL114C	Q12322	202 aa		3.76	□□□□□ -1.81
RSM28	YDR494W	Q0010	Q9ZZX9	128 aa		3.76	□□□□□ -1.81
RSM28	YDR494W	CHO2	P05374	869 aa	Known RBP	3.75	□□□□□ -1.81
RSM28	YDR494W	YEF3	P16521	1044 aa	Known RBP	3.75	□□□□□ -1.81
RSM28	YDR494W	AMD2	P22580	549 aa		3.75	□□□□□ -1.81
RSM28	YDR494W	AIM17	P23180	465 aa	Known RBP	3.75	□□□□□ -1.81
RSM28	YDR494W	RRP43	P25359	394 aa	Predicted RBP	3.75	□□□□□ -1.81
RSM28	YDR494W	PTP2	P29461	750 aa		3.75	□□□□□ -1.81
RSM28	YDR494W	LAS21	P40367	830 aa		3.75	□□□□□ -1.81
RSM28	YDR494W	HIS6	P40545	261 aa		3.75	□□□□□ -1.81
RSM28	YDR494W	CIN1	P40987	1014 aa		3.75	□□□□□ -1.81
RSM28	YDR494W	LYS20	P48570	428 aa	Known RBP	3.75	□□□□□ -1.81
RSM28	YDR494W	COG2	P53271	262 aa		3.75	□□□□□ -1.81
RSM28	YDR494W	TEP1	P53916	434 aa		3.75	□□□□□ -1.81
RSM28	YDR494W	YML119W	Q03208	357 aa		3.75	□□□□□ -1.81
RSM28	YDR494W	TRS31	Q03337	283 aa		3.75	□□□□□ -1.81
RSM28	YDR494W	CRD1	Q07560	283 aa		3.75	□□□□□ -1.81
RSM28	YDR494W	AAD4	Q07747	329 aa		3.75	□□□□□ -1.81
RSM28	YDR494W	SRL1	Q08673	210 aa		3.75	□□□□□ -1.81
RSM28	YDR494W	RPS7A	P26786	190 aa	Known RBP	3.74	□□□□□ -1.81
RSM28	YDR494W	ATO2	P32907	282 aa		3.74	□□□□□ -1.81
RSM28	YDR494W	MTG2	P38860	518 aa		3.74	□□□□□ -1.81
RSM28	YDR494W	LNP1	P38878	278 aa		3.74	□□□□□ -1.81
RSM28	YDR494W	MAM1	P40065	302 aa		3.74	□□□□□ -1.81
RSM28	YDR494W	MAF1	P41910	395 aa		3.74	□□□□□ -1.81
RSM28	YDR494W	MAD3	P47074	515 aa		3.74	□□□□□ -1.81
RSM28	YDR494W	IOC4	Q04213	475 aa		3.74	□□□□□ -1.81
RSM28	YDR494W	RAD34	Q06665	692 aa		3.74	□□□□□ -1.81
RSM28	YDR494W	BUD7	Q08754	746 aa		3.74	□□□□□ -1.81
RSM28	YDR494W	RTC1	Q08281	1341 aa		3.73	□□□□□ -1.81
RSM28	YDR494W	GAL4	P04386	881 aa		3.73	□□□□□ -1.81
RSM28	YDR494W	PRP45	P28004	379 aa	Predicted RBP	3.73	□□□□□ -1.81
RSM28	YDR494W	PRE2	P30656	287 aa	Known RBP	3.73	□□□□□ -1.81
RSM28	YDR494W	RPT3	P33298	428 aa	Known RBP	3.73	□□□□□ -1.81
RSM28	YDR494W	KES1	P35844	434 aa	Known RBP	3.73	□□□□□ -1.81
RSM28	YDR494W	RRP8	P38961	392 aa	Known RBP	3.73	□□□□□ -1.81
RSM28	YDR494W	VPS8	P39702	1274 aa		3.73	□□□□□ -1.81
RSM28	YDR494W	RAD26	P40352	1085 aa		3.73	□□□□□ -1.81
RSM28	YDR494W	QRI7	P43122	407 aa		3.73	□□□□□ -1.81
RSM28	YDR494W	POL31	P46957	487 aa		3.73	□□□□□ -1.81
RSM28	YDR494W	MDV1	P47025	714 aa		3.73	□□□□□ -1.81
RSM28	YDR494W	YJR008W	P47085	338 aa		3.73	□□□□□ -1.81

Retrieved 100 of 5,963 RNA–protein pairs in 54.6 ms