RNA–Protein interactions for RNA: YDL043C

PRP11, Transcript of Subunit of the SF3a splicing factor complex, yeastyeast

Gene PRP11, Length 801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP11YDL043C RKM3P38222 552 aa4.15□□□□□ -1.75
PRP11YDL043C FMO1P38866 432 aa4.15□□□□□ -1.75
PRP11YDL043C PIG2P40187 538 aa4.15□□□□□ -1.75
PRP11YDL043C LAM5P43560 674 aa4.15□□□□□ -1.75
PRP11YDL043C UPF3P48412 387 aaKnown RBP4.15□□□□□ -1.75
PRP11YDL043C PSP1P50896 841 aaKnown RBP4.15□□□□□ -1.75
PRP11YDL043C TEL2P53038 688 aa4.15□□□□□ -1.75
PRP11YDL043C ATG21Q02887 496 aa4.15□□□□□ -1.75
PRP11YDL043C DBP9Q06218 594 aaKnown RBP4.15□□□□□ -1.75
PRP11YDL043C PSR1Q07800 427 aa4.15□□□□□ -1.75
PRP11YDL043C SOD2P00447 233 aa4.14□□□□□ -1.75
PRP11YDL043C TRP4P07285 380 aaPredicted RBP4.14□□□□□ -1.75
PRP11YDL043C RPB2P08518 1224 aaKnown RBP4.14□□□□□ -1.75
PRP11YDL043C MET3P08536 511 aa4.14□□□□□ -1.75
PRP11YDL043C VPS33P20795 691 aa4.14□□□□□ -1.75
PRP11YDL043C PRP28P23394 588 aa4.14□□□□□ -1.75
PRP11YDL043C YCR015CP25616 317 aa4.14□□□□□ -1.75
PRP11YDL043C HIR2P32480 875 aa4.14□□□□□ -1.75
PRP11YDL043C LST4P34239 828 aa4.14□□□□□ -1.75
PRP11YDL043C YKL100CP34248 587 aa4.14□□□□□ -1.75
PRP11YDL043C TSA1P34760 196 aaKnown RBP4.14□□□□□ -1.75
PRP11YDL043C CCL1P37366 393 aa4.14□□□□□ -1.75
PRP11YDL043C YBR053CP38235 358 aa4.14□□□□□ -1.75
PRP11YDL043C YJL193WP39542 402 aa4.14□□□□□ -1.75
PRP11YDL043C YEL068CP39977 110 aa4.14□□□□□ -1.75
PRP11YDL043C RTT105P40063 208 aa4.14□□□□□ -1.75
PRP11YDL043C TMN3P40071 706 aa4.14□□□□□ -1.75
PRP11YDL043C LRO1P40345 661 aa4.14□□□□□ -1.75
PRP11YDL043C RIC1P40395 1056 aa4.14□□□□□ -1.75
PRP11YDL043C NDC80P40460 691 aa4.14□□□□□ -1.75
PRP11YDL043C SHE4P51534 789 aa4.14□□□□□ -1.75
PRP11YDL043C RIM8P53179 542 aa4.14□□□□□ -1.75
PRP11YDL043C DLT1Q04216 342 aa4.14□□□□□ -1.75
PRP11YDL043C GSF2Q04697 403 aaKnown RBP4.14□□□□□ -1.75
PRP11YDL043C SNO4Q04902 237 aa4.14□□□□□ -1.75
PRP11YDL043C RGC1Q06108 1083 aaKnown RBP4.14□□□□□ -1.75
PRP11YDL043C ARR3Q06598 404 aa4.14□□□□□ -1.75
PRP11YDL043C CDC45Q08032 650 aa4.14□□□□□ -1.75
PRP11YDL043C SLK19Q08581 821 aaKnown RBP4.14□□□□□ -1.75
PRP11YDL043C HSP33Q08914 237 aaKnown RBP4.14□□□□□ -1.75
PRP11YDL043C PCL8Q08966 492 aa4.14□□□□□ -1.75
PRP11YDL043C HSP32Q08992 237 aa4.14□□□□□ -1.75
PRP11YDL043C ICL2Q12031 575 aa4.14□□□□□ -1.75
PRP11YDL043C YIL002W-AQ3E7Z5 69 aa4.14□□□□□ -1.75
PRP11YDL043C SGS1P35187 1447 aa4.13□□□□□ -1.75
PRP11YDL043C FOB1O13329 566 aa4.13□□□□□ -1.75
PRP11YDL043C SEM1O94742 89 aa4.13□□□□□ -1.75
PRP11YDL043C CTT1P06115 562 aa4.13□□□□□ -1.75
PRP11YDL043C CDC16P09798 840 aa4.13□□□□□ -1.75
PRP11YDL043C CAF20P12962 161 aaKnown RBP4.13□□□□□ -1.75
PRP11YDL043C TPM1P17536 199 aaKnown RBP4.13□□□□□ -1.75
PRP11YDL043C FAR1P21268 830 aa4.13□□□□□ -1.75
PRP11YDL043C RPS7AP26786 190 aaKnown RBP4.13□□□□□ -1.75
PRP11YDL043C MVD1P32377 396 aaKnown RBP4.13□□□□□ -1.75
PRP11YDL043C ACP1P32463 125 aa4.13□□□□□ -1.75
PRP11YDL043C CNS1P33313 385 aa4.13□□□□□ -1.75
PRP11YDL043C MIC60P36112 540 aa4.13□□□□□ -1.75
PRP11YDL043C TOM71P38825 639 aaKnown RBP4.13□□□□□ -1.75
PRP11YDL043C RFX1P48743 811 aa4.13□□□□□ -1.75
PRP11YDL043C EFM5P53200 248 aaKnown RBP4.13□□□□□ -1.75
PRP11YDL043C YGR054WP53235 642 aaKnown RBP4.13□□□□□ -1.75
PRP11YDL043C PXR1P53335 271 aaPredicted RBP4.13□□□□□ -1.75
PRP11YDL043C TIM50Q02776 476 aa4.13□□□□□ -1.75
PRP11YDL043C YML119WQ03208 357 aa4.13□□□□□ -1.75
PRP11YDL043C TMA10Q06177 86 aa4.13□□□□□ -1.75
PRP11YDL043C AIM6Q07716 390 aa4.13□□□□□ -1.75
PRP11YDL043C BMS1Q08965 1183 aaKnown RBP4.13□□□□□ -1.75
PRP11YDL043C CHS5Q12114 671 aaKnown RBP4.13□□□□□ -1.75
PRP11YDL043C COX17Q12287 69 aa4.13□□□□□ -1.75
PRP11YDL043C TPK1P06244 397 aa4.12□□□□□ -1.75
PRP11YDL043C MRP7P12687 371 aa4.12□□□□□ -1.75
PRP11YDL043C RPB4P20433 221 aaPredicted RBP4.12□□□□□ -1.75
PRP11YDL043C PRE10P21242 288 aaKnown RBP RIP-Chip data4.12□□□□□ -1.75not detected
PRP11YDL043C MRPL25P23369 157 aa4.12□□□□□ -1.75
PRP11YDL043C STE11P23561 717 aa4.12□□□□□ -1.75
PRP11YDL043C RNQ1P25367 405 aa4.12□□□□□ -1.75
PRP11YDL043C SKI2P35207 1287 aaKnown RBP RIP-Chip data4.12□□□□□ -1.75not detected
PRP11YDL043C AIM3P38266 947 aaKnown RBP4.12□□□□□ -1.75
PRP11YDL043C STB5P38699 743 aa4.12□□□□□ -1.75
PRP11YDL043C APE4P38821 490 aa4.12□□□□□ -1.75
PRP11YDL043C VPS41P38959 992 aa4.12□□□□□ -1.75
PRP11YDL043C YEL025CP39991 1188 aa4.12□□□□□ -1.75
PRP11YDL043C ARB1P40024 610 aaKnown RBP4.12□□□□□ -1.75
PRP11YDL043C ELO3P40319 345 aa4.12□□□□□ -1.75
PRP11YDL043C UBC11P52492 156 aa4.12□□□□□ -1.75
PRP11YDL043C SHE10P53075 577 aa4.12□□□□□ -1.75
PRP11YDL043C RNT1Q02555 471 aa4.12□□□□□ -1.75
PRP11YDL043C YPL108WQ02872 168 aaPredicted RBP4.12□□□□□ -1.75
PRP11YDL043C SPO19Q03029 223 aa4.12□□□□□ -1.75
PRP11YDL043C SNZ1Q03148 297 aa4.12□□□□□ -1.75
PRP11YDL043C SPC19Q03954 165 aa4.12□□□□□ -1.75
PRP11YDL043C VTI1Q04338 217 aa4.12□□□□□ -1.75
PRP11YDL043C YMR111CQ04461 462 aaPredicted RBP4.12□□□□□ -1.75
PRP11YDL043C CLP1Q08685 445 aaPredicted RBP4.12□□□□□ -1.75
PRP11YDL043C SUL2Q12325 893 aa4.12□□□□□ -1.75
PRP11YDL043C ZRT2Q12436 422 aa4.12□□□□□ -1.75
PRP11YDL043C PCD1Q12524 340 aa4.12□□□□□ -1.75
PRP11YDL043C NAT1P12945 854 aaKnown RBP4.11□□□□□ -1.75
PRP11YDL043C CLB1P24868 471 aa4.11□□□□□ -1.75
PRP11YDL043C CMK1P27466 446 aaKnown RBP4.11□□□□□ -1.75
Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms