RNA–Protein interactions for RNA: YBR048W

RPS11B, Transcript of Protein component of the small (40S) ribosomal subunit, yeast

Gene RPS11B, Length 471 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPS11B	YBR048W	SKM1	Q12469	655 aa		4.15	□□□□□ -1.75
RPS11B	YBR048W	PCD1	Q12524	340 aa		4.15	□□□□□ -1.75
RPS11B	YBR048W	YBR255C-A	Q3E776	120 aa		4.15	□□□□□ -1.75
RPS11B	YBR048W	YKL033W-A	Q86ZR7	236 aa		4.15	□□□□□ -1.75
RPS11B	YBR048W	TY2A-DR3	Q99303	438 aa		4.15	□□□□□ -1.75
RPS11B	YBR048W	CDC24	P11433	854 aa	Predicted RBP	4.14	□□□□□ -1.75
RPS11B	YBR048W	ABF1	P14164	731 aa		4.14	□□□□□ -1.75
RPS11B	YBR048W	SGF29	P25554	259 aa		4.14	□□□□□ -1.75
RPS11B	YBR048W	MRPL7	P36519	292 aa		4.14	□□□□□ -1.75
RPS11B	YBR048W	AIM3	P38266	947 aa	Known RBP	4.14	□□□□□ -1.75
RPS11B	YBR048W	UBS1	P38290	277 aa		4.14	□□□□□ -1.75
RPS11B	YBR048W	HRB1	P38922	454 aa	Known RBP RIP-Chip data	4.14	□□□□□ -1.75	not detected
RPS11B	YBR048W	ARB1	P40024	610 aa	Known RBP	4.14	□□□□□ -1.75
RPS11B	YBR048W	UBP7	P40453	1071 aa		4.14	□□□□□ -1.75
RPS11B	YBR048W	RMD8	P43620	662 aa		4.14	□□□□□ -1.75
RPS11B	YBR048W	YJL163C	P46996	555 aa		4.14	□□□□□ -1.75
RPS11B	YBR048W	ASE1	P50275	885 aa		4.14	□□□□□ -1.75
RPS11B	YBR048W	PAN2	P53010	1115 aa	Predicted RBP	4.14	□□□□□ -1.75
RPS11B	YBR048W	EFR3	Q03653	782 aa	Known RBP	4.14	□□□□□ -1.75
RPS11B	YBR048W	YLR287C	Q05881	355 aa		4.14	□□□□□ -1.75
RPS11B	YBR048W	NMD4	Q12129	218 aa		4.14	□□□□□ -1.75
RPS11B	YBR048W	YLR302C	O13544	120 aa		4.13	□□□□□ -1.75
RPS11B	YBR048W	KGD2	P19262	463 aa	Predicted RBP	4.13	□□□□□ -1.75
RPS11B	YBR048W	MRP20	P32387	263 aa		4.13	□□□□□ -1.75
RPS11B	YBR048W	GCD7	P32502	381 aa	Predicted RBP	4.13	□□□□□ -1.75
RPS11B	YBR048W	SDH8	P38345	138 aa		4.13	□□□□□ -1.75
RPS11B	YBR048W	STB5	P38699	743 aa		4.13	□□□□□ -1.75
RPS11B	YBR048W	YJL206C	P39529	758 aa		4.13	□□□□□ -1.75
RPS11B	YBR048W	NPR2	P39923	615 aa		4.13	□□□□□ -1.75
RPS11B	YBR048W	AAD10	P47182	288 aa		4.13	□□□□□ -1.75
RPS11B	YBR048W	COG1	P53079	417 aa		4.13	□□□□□ -1.75
RPS11B	YBR048W	ARE2	P53629	642 aa	Known RBP	4.13	□□□□□ -1.75
RPS11B	YBR048W	MTG1	Q03151	367 aa	Predicted RBP	4.13	□□□□□ -1.75
RPS11B	YBR048W	FCP1	Q03254	732 aa		4.13	□□□□□ -1.75
RPS11B	YBR048W	GTB1	Q04924	702 aa		4.13	□□□□□ -1.75
RPS11B	YBR048W	TMA10	Q06177	86 aa		4.13	□□□□□ -1.75
RPS11B	YBR048W	YSH1	Q06224	779 aa	Predicted RBP	4.13	□□□□□ -1.75
RPS11B	YBR048W	SPN1	Q06505	410 aa	Predicted RBP	4.13	□□□□□ -1.75
RPS11B	YBR048W	IRC13	Q08630	104 aa		4.13	□□□□□ -1.75
RPS11B	YBR048W	NUS1	Q12063	375 aa		4.13	□□□□□ -1.75
RPS11B	YBR048W	MLH3	Q12083	715 aa		4.13	□□□□□ -1.75
RPS11B	YBR048W	ATP2	P00830	511 aa	Known RBP	4.12	□□□□□ -1.75
RPS11B	YBR048W	TUB2	P02557	457 aa	Known RBP	4.12	□□□□□ -1.75
RPS11B	YBR048W	GCN4	P03069	281 aa		4.12	□□□□□ -1.75
RPS11B	YBR048W	ERG4	P25340	473 aa		4.12	□□□□□ -1.75
RPS11B	YBR048W	PGS1	P25578	521 aa		4.12	□□□□□ -1.75
RPS11B	YBR048W	FUB1	P25659	250 aa		4.12	□□□□□ -1.75
RPS11B	YBR048W	URK1	P27515	501 aa		4.12	□□□□□ -1.75
RPS11B	YBR048W	EFT1	P32324	842 aa	Known RBP	4.12	□□□□□ -1.75
RPS11B	YBR048W	YKL050C	P35736	922 aa		4.12	□□□□□ -1.75
RPS11B	YBR048W	PHO11	P35842	467 aa		4.12	□□□□□ -1.75
RPS11B	YBR048W	PHO12	P38693	467 aa		4.12	□□□□□ -1.75
RPS11B	YBR048W	FLC2	P39719	783 aa		4.12	□□□□□ -1.75
RPS11B	YBR048W	FMP10	P40098	244 aa		4.12	□□□□□ -1.75
RPS11B	YBR048W	SKP2	P42843	763 aa		4.12	□□□□□ -1.75
RPS11B	YBR048W	ZAP1	P47043	880 aa		4.12	□□□□□ -1.75
RPS11B	YBR048W	MCM6	P53091	1017 aa	Known RBP	4.12	□□□□□ -1.75
RPS11B	YBR048W	MUB1	Q03162	620 aa		4.12	□□□□□ -1.75
RPS11B	YBR048W	SFI1	Q12369	946 aa		4.12	□□□□□ -1.75
RPS11B	YBR048W	ERG27	Q12452	347 aa	Known RBP	4.12	□□□□□ -1.75
RPS11B	YBR048W	HSH49	Q99181	213 aa	Predicted RBP	4.12	□□□□□ -1.75
RPS11B	YBR048W	VCX1	Q99385	411 aa		4.12	□□□□□ -1.75
RPS11B	YBR048W	SEC53	P07283	254 aa	Known RBP	4.11	□□□□□ -1.75
RPS11B	YBR048W	CKA1	P15790	372 aa		4.11	□□□□□ -1.75
RPS11B	YBR048W	THR1	P17423	357 aa	Known RBP	4.11	□□□□□ -1.75
RPS11B	YBR048W	ERG8	P24521	451 aa		4.11	□□□□□ -1.75
RPS11B	YBR048W	CDC5	P32562	705 aa		4.11	□□□□□ -1.75
RPS11B	YBR048W	TOD6	P34219	525 aa		4.11	□□□□□ -1.75
RPS11B	YBR048W	CCL1	P37366	393 aa		4.11	□□□□□ -1.75
RPS11B	YBR048W	LYS14	P40971	790 aa		4.11	□□□□□ -1.75
RPS11B	YBR048W	ARF3	P40994	183 aa	RIP-Chip data	4.11	□□□□□ -1.75	not detected
RPS11B	YBR048W	THI6	P41835	540 aa		4.11	□□□□□ -1.75
RPS11B	YBR048W	DUO1	P53168	247 aa	Known RBP	4.11	□□□□□ -1.75
RPS11B	YBR048W	SPC98	P53540	846 aa		4.11	□□□□□ -1.75
RPS11B	YBR048W	DAK1	P54838	584 aa	Known RBP	4.11	□□□□□ -1.75
RPS11B	YBR048W	YSA1	Q01976	231 aa		4.11	□□□□□ -1.75
RPS11B	YBR048W	RNT1	Q02555	471 aa		4.11	□□□□□ -1.75
RPS11B	YBR048W	HOF1	Q05080	669 aa		4.11	□□□□□ -1.75
RPS11B	YBR048W	UTP21	Q06078	939 aa	Predicted RBP	4.11	□□□□□ -1.75
RPS11B	YBR048W	YDL086W	Q07505	273 aa		4.11	□□□□□ -1.75
RPS11B	YBR048W	HUA2	Q12134	243 aa		4.11	□□□□□ -1.75
RPS11B	YBR048W	NOP58	Q12499	511 aa	Known RBP	4.11	□□□□□ -1.75
RPS11B	YBR048W	PDE1	P22434	369 aa		4.1	□□□□□ -1.75
RPS11B	YBR048W	LRE1	P25579	583 aa	Known RBP	4.1	□□□□□ -1.75
RPS11B	YBR048W	CNE1	P27825	502 aa		4.1	□□□□□ -1.75
RPS11B	YBR048W	HIS7	P33734	552 aa	Known RBP	4.1	□□□□□ -1.75
RPS11B	YBR048W	BLI1	P35727	113 aa		4.1	□□□□□ -1.75
RPS11B	YBR048W	PSD1	P39006	500 aa		4.1	□□□□□ -1.75
RPS11B	YBR048W	TPA1	P40032	644 aa	Known RBP	4.1	□□□□□ -1.75
RPS11B	YBR048W	SLZ1	P40167	298 aa		4.1	□□□□□ -1.75
RPS11B	YBR048W	YIL161W	P40449	235 aa	Known RBP	4.1	□□□□□ -1.75
RPS11B	YBR048W	TAM41	P53230	385 aa		4.1	□□□□□ -1.75
RPS11B	YBR048W	PIL1	P53252	339 aa	Known RBP	4.1	□□□□□ -1.75
RPS11B	YBR048W	SNF12	P53628	566 aa		4.1	□□□□□ -1.75
RPS11B	YBR048W	VPS75	P53853	264 aa		4.1	□□□□□ -1.75
RPS11B	YBR048W	ATG4	P53867	494 aa		4.1	□□□□□ -1.75
RPS11B	YBR048W	RIA1	P53893	1110 aa		4.1	□□□□□ -1.75
RPS11B	YBR048W	TIM10	P87108	93 aa		4.1	□□□□□ -1.75
RPS11B	YBR048W	RPS15	Q01855	142 aa	Known RBP	4.1	□□□□□ -1.75
RPS11B	YBR048W	MFB1	Q04922	465 aa		4.1	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 35.5 ms