RNA–Protein interactions for RNA: YAL040C

CLN3, Transcript of G1 cyclin involved in cell cycle progression, yeastyeast

Gene CLN3, Length 1,743 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CLN3YAL040C PCL2P25693 308 aa2.46□□□□□ -2.02
CLN3YAL040C UTR4P32626 227 aa2.46□□□□□ -2.02
CLN3YAL040C EBP2P36049 427 aaKnown RBP2.46□□□□□ -2.02
CLN3YAL040C PXL1P36166 706 aa2.46□□□□□ -2.02
CLN3YAL040C MUM2P38236 366 aa2.46□□□□□ -2.02
CLN3YAL040C SIP3P38717 1229 aa2.46□□□□□ -2.02
CLN3YAL040C MIP6P38760 659 aaKnown RBP2.46□□□□□ -2.02
CLN3YAL040C ERC1P38767 581 aa2.46□□□□□ -2.02
CLN3YAL040C SIT1P39980 628 aa2.46□□□□□ -2.02
CLN3YAL040C GPP2P40106 250 aaKnown RBP2.46□□□□□ -2.02
CLN3YAL040C NDE1P40215 560 aa2.46□□□□□ -2.02
CLN3YAL040C SEC9P40357 651 aa2.46□□□□□ -2.02
CLN3YAL040C YIL089WP40500 205 aa2.46□□□□□ -2.02
CLN3YAL040C GZF3P42944 551 aaKnown RBP2.46□□□□□ -2.02
CLN3YAL040C VTC2P43585 828 aa2.46□□□□□ -2.02
CLN3YAL040C TOS3P43637 560 aa2.46□□□□□ -2.02
CLN3YAL040C YJR096WP47137 282 aa2.46□□□□□ -2.02
CLN3YAL040C TAD1P53065 400 aa2.46□□□□□ -2.02
CLN3YAL040C TAN1P53072 289 aaPredicted RBP2.46□□□□□ -2.02
CLN3YAL040C RTC4P53850 401 aa2.46□□□□□ -2.02
CLN3YAL040C VPS75P53853 264 aa2.46□□□□□ -2.02
CLN3YAL040C MFM1Q02783 413 aa2.46□□□□□ -2.02
CLN3YAL040C CSM3Q04659 317 aa2.46□□□□□ -2.02
CLN3YAL040C SPH1Q06160 661 aa2.46□□□□□ -2.02
CLN3YAL040C YTM1Q12024 460 aaPredicted RBP2.46□□□□□ -2.02
CLN3YAL040C MED1Q12321 566 aa2.46□□□□□ -2.02
CLN3YAL040C VPS5Q92331 675 aa2.46□□□□□ -2.02
CLN3YAL040C OM45P16547 393 aa2.45□□□□□ -2.02
CLN3YAL040C APA1P16550 321 aaKnown RBP2.45□□□□□ -2.02
CLN3YAL040C TUP1P16649 713 aa2.45□□□□□ -2.02
CLN3YAL040C PRP22P24384 1145 aaKnown RBP2.45□□□□□ -2.02
CLN3YAL040C CAD1P24813 409 aaKnown RBP2.45□□□□□ -2.02
CLN3YAL040C KAR4P25583 335 aa2.45□□□□□ -2.02
CLN3YAL040C DBF20P32328 564 aa2.45□□□□□ -2.02
CLN3YAL040C MCM10P32354 571 aa2.45□□□□□ -2.02
CLN3YAL040C CDC12P32468 407 aaKnown RBP2.45□□□□□ -2.02
CLN3YAL040C OCT1P35999 772 aa2.45□□□□□ -2.02
CLN3YAL040C KTR4P38131 464 aa2.45□□□□□ -2.02
CLN3YAL040C BCD1P38772 366 aa2.45□□□□□ -2.02
CLN3YAL040C OAF1P39720 1047 aaPredicted RBP2.45□□□□□ -2.02
CLN3YAL040C GPD2P41911 440 aaKnown RBP2.45□□□□□ -2.02
CLN3YAL040C GUS1P46655 708 aaKnown RBP RIP-Chip data2.45□□□□□ -2.02not detected
CLN3YAL040C STU2P46675 888 aa2.45□□□□□ -2.02
CLN3YAL040C NBP1P52919 319 aaPredicted RBP2.45□□□□□ -2.02
CLN3YAL040C SCS3P53012 380 aa2.45□□□□□ -2.02
CLN3YAL040C MET13P53128 600 aa2.45□□□□□ -2.02
CLN3YAL040C LIF1P53150 421 aa2.45□□□□□ -2.02
CLN3YAL040C SOL4P53315 255 aa2.45□□□□□ -2.02
CLN3YAL040C TOF1P53840 1238 aa2.45□□□□□ -2.02
CLN3YAL040C ARK1P53974 638 aa2.45□□□□□ -2.02
CLN3YAL040C YML122CQ03207 126 aa2.45□□□□□ -2.02
CLN3YAL040C PHM6Q05637 104 aa2.45□□□□□ -2.02
CLN3YAL040C SDH5Q08230 162 aa2.45□□□□□ -2.02
CLN3YAL040C RIF1P29539 1916 aa2.45□□□□□ -2.02
CLN3YAL040C CDC9P04819 755 aa2.45□□□□□ -2.02
CLN3YAL040C CLN3P13365 580 aa2.45□□□□□ -2.02
CLN3YAL040C MSD1P15179 658 aaKnown RBP2.45□□□□□ -2.02
CLN3YAL040C SPO12P17123 173 aa2.45□□□□□ -2.02
CLN3YAL040C SFL1P20134 766 aa2.45□□□□□ -2.02
CLN3YAL040C SPO11P23179 398 aa2.45□□□□□ -2.02
CLN3YAL040C PRP19P32523 503 aaKnown RBP2.45□□□□□ -2.02
CLN3YAL040C XRS2P33301 854 aa2.45□□□□□ -2.02
CLN3YAL040C STO1P34160 861 aaKnown RBP2.45□□□□□ -2.02
CLN3YAL040C YKL050CP35736 922 aa2.45□□□□□ -2.02
CLN3YAL040C MCR1P36060 302 aaKnown RBP2.45□□□□□ -2.02
CLN3YAL040C CTM1P38818 585 aa2.45□□□□□ -2.02
CLN3YAL040C APE4P38821 490 aa2.45□□□□□ -2.02
CLN3YAL040C CKB2P38930 258 aa2.45□□□□□ -2.02
CLN3YAL040C MBP1P39678 833 aa2.45□□□□□ -2.02
CLN3YAL040C VFA1P40080 203 aa2.45□□□□□ -2.02
CLN3YAL040C EMP65P40085 556 aa2.45□□□□□ -2.02
CLN3YAL040C TMA108P40462 946 aa2.45□□□□□ -2.02
CLN3YAL040C SAD1P43589 448 aa2.45□□□□□ -2.02
CLN3YAL040C ERG5P54781 538 aa2.45□□□□□ -2.02
CLN3YAL040C PTA1Q01329 785 aaPredicted RBP2.45□□□□□ -2.02
CLN3YAL040C TRS130Q03660 1102 aa2.45□□□□□ -2.02
CLN3YAL040C YMR321CQ04898 105 aa2.45□□□□□ -2.02
CLN3YAL040C FUS2Q05670 677 aa2.45□□□□□ -2.02
CLN3YAL040C YPR196WQ06595 470 aa2.45□□□□□ -2.02
CLN3YAL040C CRD1Q07560 283 aa2.45□□□□□ -2.02
CLN3YAL040C GRC3Q07845 632 aa2.45□□□□□ -2.02
CLN3YAL040C TCO89Q08921 799 aa2.45□□□□□ -2.02
CLN3YAL040C ERP3Q12403 225 aa2.45□□□□□ -2.02
CLN3YAL040C LAS17Q12446 633 aa2.45□□□□□ -2.02
CLN3YAL040C PGK1P00560 416 aaKnown RBP2.44□□□□□ -2.02
CLN3YAL040C PPR1P07272 904 aaPredicted RBP2.44□□□□□ -2.02
CLN3YAL040C MSS18P08593 268 aa2.44□□□□□ -2.02
CLN3YAL040C VMA2P16140 517 aaKnown RBP2.44□□□□□ -2.02
CLN3YAL040C PHO81P17442 1178 aa2.44□□□□□ -2.02
CLN3YAL040C PET123P17558 318 aa2.44□□□□□ -2.02
CLN3YAL040C CKA2P19454 339 aa2.44□□□□□ -2.02
CLN3YAL040C TKL1P23254 680 aaKnown RBP2.44□□□□□ -2.02
CLN3YAL040C YUR1P26725 428 aa2.44□□□□□ -2.02
CLN3YAL040C SPC29P33419 253 aa2.44□□□□□ -2.02
CLN3YAL040C MCD4P36051 919 aa2.44□□□□□ -2.02
CLN3YAL040C YKL023WP36103 277 aaKnown RBP2.44□□□□□ -2.02
CLN3YAL040C DBP7P36120 742 aaKnown RBP2.44□□□□□ -2.02
CLN3YAL040C SAP190P36123 1033 aa2.44□□□□□ -2.02
CLN3YAL040C YKR078WP36158 585 aaKnown RBP2.44□□□□□ -2.02
CLN3YAL040C NOP4P37838 685 aaKnown RBP2.44□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 19.8 ms