RNA–Protein interactions for RNA: YAL030W

SNC1, Transcript of Vesicle membrane receptor protein (v-SNARE), yeastyeast

Gene SNC1, Length 354 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytosol, Endoplasmic reticulum, Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNC1YAL030W TY2A-BQ12260 438 aa2.36□□□□□ -2.03
SNC1YAL030W TY2A-OR2Q12293 438 aa2.36□□□□□ -2.03
SNC1YAL030W TRM13Q12383 476 aa2.36□□□□□ -2.03
SNC1YAL030W TY2A-DR1Q12392 438 aa2.36□□□□□ -2.03
SNC1YAL030W TY2A-OR1Q12439 438 aa2.36□□□□□ -2.03
SNC1YAL030W ENT1Q12518 454 aa2.36□□□□□ -2.03
SNC1YAL030W TY2A-DR3Q99303 438 aa2.36□□□□□ -2.03
SNC1YAL030W VCX1Q99385 411 aa2.36□□□□□ -2.03
SNC1YAL030W FOB1O13329 566 aa2.35□□□□□ -2.03
SNC1YAL030W YLR302CO13544 120 aa2.35□□□□□ -2.03
SNC1YAL030W MET8P15807 274 aa2.35□□□□□ -2.03
SNC1YAL030W KGD2P19262 463 aaPredicted RBP2.35□□□□□ -2.03
SNC1YAL030W OLE1P21147 510 aaKnown RBP2.35□□□□□ -2.03
SNC1YAL030W PDE1P22434 369 aa2.35□□□□□ -2.03
SNC1YAL030W SGF29P25554 259 aa2.35□□□□□ -2.03
SNC1YAL030W FUB1P25659 250 aa2.35□□□□□ -2.03
SNC1YAL030W CTS1P29029 562 aa2.35□□□□□ -2.03
SNC1YAL030W MRP20P32387 263 aa2.35□□□□□ -2.03
SNC1YAL030W GCD7P32502 381 aaPredicted RBP2.35□□□□□ -2.03
SNC1YAL030W NPL6P32832 435 aa2.35□□□□□ -2.03
SNC1YAL030W CCL1P37366 393 aa2.35□□□□□ -2.03
SNC1YAL030W RKM3P38222 552 aa2.35□□□□□ -2.03
SNC1YAL030W TDP1P38319 544 aa2.35□□□□□ -2.03
SNC1YAL030W STB5P38699 743 aa2.35□□□□□ -2.03
SNC1YAL030W ARB1P40024 610 aaKnown RBP2.35□□□□□ -2.03
SNC1YAL030W YIL161WP40449 235 aaKnown RBP2.35□□□□□ -2.03
SNC1YAL030W SKP2P42843 763 aa2.35□□□□□ -2.03
SNC1YAL030W COG1P53079 417 aa2.35□□□□□ -2.03
SNC1YAL030W TAM41P53230 385 aa2.35□□□□□ -2.03
SNC1YAL030W SPC98P53540 846 aa2.35□□□□□ -2.03
SNC1YAL030W SNF12P53628 566 aa2.35□□□□□ -2.03
SNC1YAL030W DAK1P54838 584 aaKnown RBP2.35□□□□□ -2.03
SNC1YAL030W RPS15Q01855 142 aaKnown RBP2.35□□□□□ -2.03
SNC1YAL030W MTG1Q03151 367 aaPredicted RBP2.35□□□□□ -2.03
SNC1YAL030W UFO1Q04511 668 aa2.35□□□□□ -2.03
SNC1YAL030W YDL086WQ07505 273 aa2.35□□□□□ -2.03
SNC1YAL030W YLR040CQ07988 224 aa2.35□□□□□ -2.03
SNC1YAL030W ICL2Q12031 575 aa2.35□□□□□ -2.03
SNC1YAL030W MLH3Q12083 715 aa2.35□□□□□ -2.03
SNC1YAL030W RKI1Q12189 258 aa2.35□□□□□ -2.03
SNC1YAL030W COX17Q12287 69 aa2.35□□□□□ -2.03
SNC1YAL030W ERP4Q12450 207 aa2.35□□□□□ -2.03
SNC1YAL030W SKM1Q12469 655 aa2.35□□□□□ -2.03
SNC1YAL030W PCD1Q12524 340 aa2.35□□□□□ -2.03
SNC1YAL030W ATP2P00830 511 aaKnown RBP2.34□□□□□ -2.03
SNC1YAL030W ALG7P07286 448 aa2.34□□□□□ -2.03
SNC1YAL030W CDC24P11433 854 aaPredicted RBP2.34□□□□□ -2.03
SNC1YAL030W HCM1P25364 564 aa2.34□□□□□ -2.03
SNC1YAL030W LRE1P25579 583 aaKnown RBP2.34□□□□□ -2.03
SNC1YAL030W URK1P27515 501 aa2.34□□□□□ -2.03
SNC1YAL030W PMI40P29952 429 aaKnown RBP2.34□□□□□ -2.03
SNC1YAL030W CDC5P32562 705 aa2.34□□□□□ -2.03
SNC1YAL030W HIS7P33734 552 aaKnown RBP2.34□□□□□ -2.03
SNC1YAL030W LOT5P34234 306 aa2.34□□□□□ -2.03
SNC1YAL030W ELF1P36053 145 aa2.34□□□□□ -2.03
SNC1YAL030W GEX2P36173 615 aa2.34□□□□□ -2.03
SNC1YAL030W APL3P38065 1025 aa2.34□□□□□ -2.03
SNC1YAL030W MPT5P39016 859 aaKnown RBP RIP-Chip data2.34□□□□□ -2.03not detected
SNC1YAL030W BUD16P39988 312 aa2.34□□□□□ -2.03
SNC1YAL030W PHM8P40025 321 aa2.34□□□□□ -2.03
SNC1YAL030W ARG2P40360 574 aa2.34□□□□□ -2.03
SNC1YAL030W UBP7P40453 1071 aa2.34□□□□□ -2.03
SNC1YAL030W AIM21P40563 679 aa2.34□□□□□ -2.03
SNC1YAL030W IRC24P40580 263 aa2.34□□□□□ -2.03
SNC1YAL030W VTC2P43585 828 aa2.34□□□□□ -2.03
SNC1YAL030W AAD10P47182 288 aa2.34□□□□□ -2.03
SNC1YAL030W YGR151CP53287 111 aa2.34□□□□□ -2.03
SNC1YAL030W RBG2P53295 368 aaKnown RBP2.34□□□□□ -2.03
SNC1YAL030W ATG4P53867 494 aa2.34□□□□□ -2.03
SNC1YAL030W SSL2Q00578 843 aa2.34□□□□□ -2.03
SNC1YAL030W AIM39Q08223 395 aa2.34□□□□□ -2.03
SNC1YAL030W CRT10Q08226 957 aa2.34□□□□□ -2.03
SNC1YAL030W YPL216WQ08964 1102 aa2.34□□□□□ -2.03
SNC1YAL030W TGS1Q12052 315 aa2.34□□□□□ -2.03
SNC1YAL030W NUS1Q12063 375 aa2.34□□□□□ -2.03
SNC1YAL030W USV1Q12132 391 aa2.34□□□□□ -2.03
SNC1YAL030W NTO1Q12311 748 aa2.34□□□□□ -2.03
SNC1YAL030W ERG27Q12452 347 aaKnown RBP2.34□□□□□ -2.03
SNC1YAL030W NOP58Q12499 511 aaKnown RBP2.34□□□□□ -2.03
SNC1YAL030W TUB2P02557 457 aaKnown RBP2.33□□□□□ -2.04
SNC1YAL030W GCN4P03069 281 aa2.33□□□□□ -2.04
SNC1YAL030W PRE8P23639 250 aa2.33□□□□□ -2.04
SNC1YAL030W PGS1P25578 521 aa2.33□□□□□ -2.04
SNC1YAL030W TFC3P34111 1160 aa2.33□□□□□ -2.04
SNC1YAL030W ESL2P36168 1195 aa2.33□□□□□ -2.04
SNC1YAL030W YBR225WP38321 900 aa2.33□□□□□ -2.04
SNC1YAL030W YHL017WP38745 532 aa2.33□□□□□ -2.04
SNC1YAL030W LNP1P38878 278 aa2.33□□□□□ -2.04
SNC1YAL030W FLC2P39719 783 aa2.33□□□□□ -2.04
SNC1YAL030W MAM1P40065 302 aa2.33□□□□□ -2.04
SNC1YAL030W FMP10P40098 244 aa2.33□□□□□ -2.04
SNC1YAL030W SLZ1P40167 298 aa2.33□□□□□ -2.04
SNC1YAL030W DJP1P40564 432 aa2.33□□□□□ -2.04
SNC1YAL030W THI6P41835 540 aa2.33□□□□□ -2.04
SNC1YAL030W DUO1P53168 247 aaKnown RBP2.33□□□□□ -2.04
SNC1YAL030W MRPL19P53875 158 aa2.33□□□□□ -2.04
SNC1YAL030W SMX3P54999 86 aaPredicted RBP2.33□□□□□ -2.04
SNC1YAL030W TIM10P87108 93 aa2.33□□□□□ -2.04
SNC1YAL030W REG1Q00816 1014 aa2.33□□□□□ -2.04
SNC1YAL030W YSA1Q01976 231 aa2.33□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 105.3 ms