RNA–Protein interactions for RNA: ENST00000598860.1

SMG9-207, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-207ENST00000598860 PRAMEF22A3QJZ6 481 aa13.12□□□□□ -0.31
SMG9-207ENST00000598860 TERTO14746 1132 aaKnown RBP13.12□□□□□ -0.31
SMG9-207ENST00000598860 TGFB2P61812 414 aa13.12□□□□□ -0.31
SMG9-207ENST00000598860 FKBP4Q02790 459 aaKnown RBP eCLIP13.12□□□□□ -0.31
SMG9-207ENST00000598860 NOM1Q5C9Z4 860 aaKnown RBP13.12□□□□□ -0.31
SMG9-207ENST00000598860 VTI1AQ96AJ9 217 aa13.12□□□□□ -0.31
SMG9-207ENST00000598860 DDX21Q9NR30 783 aaKnown RBP eCLIP13.12□□□□□ -0.31
SMG9-207ENST00000598860 HYPKQ9NX55 129 aa13.12□□□□□ -0.31
SMG9-207ENST00000598860 IPO8O15397 1037 aaKnown RBP13.11□□□□□ -0.31
SMG9-207ENST00000598860 PPP1R12BO60237 982 aaPredicted RBP13.11□□□□□ -0.31
SMG9-207ENST00000598860 YBX3P16989 372 aaKnown RBP eCLIP13.11□□□□□ -0.31
SMG9-207ENST00000598860 DDR1Q08345 913 aa13.11□□□□□ -0.31
SMG9-207ENST00000598860 NFIXQ14938 502 aa13.11□□□□□ -0.31
SMG9-207ENST00000598860 HELQQ8TDG4 1101 aa13.11□□□□□ -0.31
SMG9-207ENST00000598860 AIDAQ96BJ3 306 aa13.11□□□□□ -0.31
SMG9-207ENST00000598860 AFDNP55196 1824 aaKnown RBP13.11□□□□□ -0.31
SMG9-207ENST00000598860 PTPRCP08575 1304 aa13.11□□□□□ -0.31
SMG9-207ENST00000598860 A0A0G2JLW4 131 aa13.1□□□□□ -0.31
SMG9-207ENST00000598860 POLRMTO00411 1230 aaKnown RBP13.1□□□□□ -0.31
SMG9-207ENST00000598860 ECM1Q16610 540 aa13.1□□□□□ -0.31
SMG9-207ENST00000598860 ZDHHC1Q8WTX9 485 aa13.1□□□□□ -0.31
SMG9-207ENST00000598860 CHPF2Q9P2E5 772 aa13.1□□□□□ -0.31
SMG9-207ENST00000598860 CHD4Q14839 1912 aa13.09□□□□□ -0.31
SMG9-207ENST00000598860 SCN7AQ01118 1682 aa13.09□□□□□ -0.31
SMG9-207ENST00000598860 A0A1B0GTH6 734 aa13.09□□□□□ -0.31
SMG9-207ENST00000598860 SERPINB2P05120 415 aa13.09□□□□□ -0.31
SMG9-207ENST00000598860 NOS2P35228 1153 aa13.09□□□□□ -0.31
SMG9-207ENST00000598860 PIP4K2AP48426 406 aaPredicted RBP13.09□□□□□ -0.31
SMG9-207ENST00000598860 PSMA6P60900 246 aaKnown RBP13.09□□□□□ -0.31
SMG9-207ENST00000598860 TEAD4Q15561 434 aa13.09□□□□□ -0.31
SMG9-207ENST00000598860 BICDL1Q6ZP65 573 aa13.09□□□□□ -0.31
SMG9-207ENST00000598860 RIPOR1Q6ZS17 1223 aa13.09□□□□□ -0.31
SMG9-207ENST00000598860 NPAS3Q8IXF0 933 aa13.09□□□□□ -0.31
SMG9-207ENST00000598860 ARHGAP45Q92619 1136 aa13.09□□□□□ -0.31
SMG9-207ENST00000598860 BCL2L13Q9BXK5 485 aa13.09□□□□□ -0.31
SMG9-207ENST00000598860 WWC3Q9ULE0 1092 aa13.09□□□□□ -0.31
SMG9-207ENST00000598860 PXDNLA1KZ92 1463 aa13.09□□□□□ -0.31
SMG9-207ENST00000598860 RNF123Q5XPI4 1314 aa13.09□□□□□ -0.31
SMG9-207ENST00000598860 C10orf71Q711Q0 1435 aa13.08□□□□□ -0.32
SMG9-207ENST00000598860 BCAR3O75815 825 aa13.08□□□□□ -0.32
SMG9-207ENST00000598860 DPEP1P16444 411 aa13.08□□□□□ -0.32
SMG9-207ENST00000598860 ITGA6P23229 1130 aa13.08□□□□□ -0.32
SMG9-207ENST00000598860 ZKSCAN2Q63HK3 967 aa13.08□□□□□ -0.32
SMG9-207ENST00000598860 API5Q9BZZ5 524 aaKnown RBP13.08□□□□□ -0.32
SMG9-207ENST00000598860 GPAMQ9HCL2 828 aa13.08□□□□□ -0.32
SMG9-207ENST00000598860 ZNF232Q9UNY5 417 aa13.08□□□□□ -0.32
SMG9-207ENST00000598860 SERTM1A2A2V5 107 aa13.07□□□□□ -0.32
SMG9-207ENST00000598860 H3BM21 787 aa13.07□□□□□ -0.32
SMG9-207ENST00000598860 CAMTA2O94983 1202 aa13.07□□□□□ -0.32
SMG9-207ENST00000598860 DDX58O95786 925 aaKnown RBP13.07□□□□□ -0.32
SMG9-207ENST00000598860 F11P03951 625 aa13.07□□□□□ -0.32
SMG9-207ENST00000598860 MSX1P28360 303 aa13.07□□□□□ -0.32
SMG9-207ENST00000598860 RRP1P56182 461 aaKnown RBP13.07□□□□□ -0.32
SMG9-207ENST00000598860 ARHGAP4P98171 946 aa13.07□□□□□ -0.32
SMG9-207ENST00000598860 SH3PXD2AQ5TCZ1 1133 aa13.07□□□□□ -0.32
SMG9-207ENST00000598860 TBC1D9BQ66K14 1250 aa13.07□□□□□ -0.32
SMG9-207ENST00000598860 STAG2Q8N3U4 1231 aa13.07□□□□□ -0.32
SMG9-207ENST00000598860 C2orf49Q9BVC5 232 aaPredicted RBP13.07□□□□□ -0.32
SMG9-207ENST00000598860 CHMP3Q9Y3E7 222 aa13.07□□□□□ -0.32
SMG9-207ENST00000598860 KIF13BQ9NQT8 1826 aa13.06□□□□□ -0.32
SMG9-207ENST00000598860 TCERG1O14776 1098 aaKnown RBP13.06□□□□□ -0.32
SMG9-207ENST00000598860 SETDB2Q96T68 719 aa13.06□□□□□ -0.32
SMG9-207ENST00000598860 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.06□□□□□ -0.32
SMG9-207ENST00000598860 CUEDC1Q9NWM3 386 aaPredicted RBP13.06□□□□□ -0.32
SMG9-207ENST00000598860 BCS1LQ9Y276 419 aa13.06□□□□□ -0.32
SMG9-207ENST00000598860 SUPT16HQ9Y5B9 1047 aaKnown RBP13.06□□□□□ -0.32
SMG9-207ENST00000598860 MYL6BP14649 208 aa13.05□□□□□ -0.32
SMG9-207ENST00000598860 NFX1Q12986 1120 aaKnown RBP13.05□□□□□ -0.32
SMG9-207ENST00000598860 PROSER3Q2NL68 480 aa13.05□□□□□ -0.32
SMG9-207ENST00000598860 C16orf46Q6P387 395 aa13.05□□□□□ -0.32
SMG9-207ENST00000598860 CLEC4GQ6UXB4 293 aa13.05□□□□□ -0.32
SMG9-207ENST00000598860 ATF7IPQ6VMQ6 1270 aa13.05□□□□□ -0.32
SMG9-207ENST00000598860 LRP10Q7Z4F1 713 aa13.05□□□□□ -0.32
SMG9-207ENST00000598860 FRAT1Q92837 279 aaPredicted RBP13.05□□□□□ -0.32
SMG9-207ENST00000598860 SAP130Q9H0E3 1048 aa13.05□□□□□ -0.32
SMG9-207ENST00000598860 PIM2Q9P1W9 311 aa13.05□□□□□ -0.32
SMG9-207ENST00000598860 NOB1Q9ULX3 412 aaKnown RBP13.05□□□□□ -0.32
SMG9-207ENST00000598860 ZNF652Q9Y2D9 606 aa13.05□□□□□ -0.32
SMG9-207ENST00000598860 RBM47A0AV96 593 aaKnown RBP13.04□□□□□ -0.32
SMG9-207ENST00000598860 EML1O00423 815 aa13.04□□□□□ -0.32
SMG9-207ENST00000598860 KCNA3P22001 575 aa13.04□□□□□ -0.32
SMG9-207ENST00000598860 MAPK1P28482 360 aa13.04□□□□□ -0.32
SMG9-207ENST00000598860 TXLNAP40222 546 aa13.04□□□□□ -0.32
SMG9-207ENST00000598860 PDE3AQ14432 1141 aa13.04□□□□□ -0.32
SMG9-207ENST00000598860 DCTN4Q9UJW0 460 aa13.04□□□□□ -0.32
SMG9-207ENST00000598860 CDC14CA4D256 554 aa13.03□□□□□ -0.32
SMG9-207ENST00000598860 ANKRD33BA6NCL7 494 aa13.03□□□□□ -0.32
SMG9-207ENST00000598860 NPHP1O15259 732 aa13.03□□□□□ -0.32
SMG9-207ENST00000598860 ANXA1P04083 346 aa13.03□□□□□ -0.32
SMG9-207ENST00000598860 NPR3P17342 541 aa13.03□□□□□ -0.32
SMG9-207ENST00000598860 CHRNA5P30532 468 aa13.03□□□□□ -0.32
SMG9-207ENST00000598860 DALRD3Q5D0E6 543 aaKnown RBP13.03□□□□□ -0.32
SMG9-207ENST00000598860 KSR2Q6VAB6 950 aa13.03□□□□□ -0.32
SMG9-207ENST00000598860 KIF6Q6ZMV9 814 aa13.03□□□□□ -0.32
SMG9-207ENST00000598860 COPS6Q7L5N1 327 aa13.03□□□□□ -0.32
SMG9-207ENST00000598860 G2E3Q7L622 706 aa13.03□□□□□ -0.32
SMG9-207ENST00000598860 FTSJ3Q8IY81 847 aaKnown RBP13.03□□□□□ -0.32
SMG9-207ENST00000598860 XAGE3Q8WTP9 111 aa13.03□□□□□ -0.32
SMG9-207ENST00000598860 RUBCNLQ9H714 662 aa13.03□□□□□ -0.32
SMG9-207ENST00000598860 PHAXQ9H814 394 aaKnown RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms