RNA–Protein interactions for RNA: ENST00000598860.1

SMG9-207, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-207ENST00000598860 AEBP2Q6ZN18 517 aaPredicted RBP36.62■■■■□ 3.45
SMG9-207ENST00000598860 CHIC1Q5VXU3 224 aa35.79■■■■□ 3.32
SMG9-207ENST00000598860 PHF23Q9BUL5 403 aaPredicted RBP31.51■■■□□ 2.63
SMG9-207ENST00000598860 SENP3Q9H4L4 574 aaPredicted RBP31.03■■■□□ 2.56
SMG9-207ENST00000598860 PLPPR3Q6T4P5 718 aa29.09■■■□□ 2.25
SMG9-207ENST00000598860 FOXD1Q16676 465 aa28.82■■■□□ 2.2
SMG9-207ENST00000598860 PPP6R1Q9UPN7 881 aa27.79■■■□□ 2.04
SMG9-207ENST00000598860 ADRA2BP18089 450 aa27.78■■■□□ 2.04
SMG9-207ENST00000598860 PIAS4Q8N2W9 510 aaPredicted RBP27.2■■□□□ 1.94
SMG9-207ENST00000598860 MSH5O43196 834 aa26.53■■□□□ 1.84
SMG9-207ENST00000598860 PPP4R3CPQ6ZMV5 832 aa25.67■■□□□ 1.7
SMG9-207ENST00000598860 POTEDQ86YR6 584 aa25.55■■□□□ 1.68
SMG9-207ENST00000598860 SCAF1Q9H7N4 1312 aaKnown RBP25.37■■□□□ 1.65
SMG9-207ENST00000598860 MAPK8IP2Q13387 824 aaPredicted RBP25.2■■□□□ 1.62
SMG9-207ENST00000598860 KCNA4P22459 653 aa25.13■■□□□ 1.61
SMG9-207ENST00000598860 NCBP3Q53F19 620 aaKnown RBP24.98■■□□□ 1.59
SMG9-207ENST00000598860 CNKSR2Q8WXI2 1034 aa24.91■■□□□ 1.58
SMG9-207ENST00000598860 DMRT2Q9Y5R5 561 aa24.78■■□□□ 1.56
SMG9-207ENST00000598860 NPM3O75607 178 aaKnown RBP24.64■■□□□ 1.54
SMG9-207ENST00000598860 RNF216Q9NWF9 866 aaPredicted RBP24.4■■□□□ 1.5
SMG9-207ENST00000598860 NISCHQ9Y2I1 1504 aa24.33■■□□□ 1.49
SMG9-207ENST00000598860 HOXD11P31277 338 aaPredicted RBP24.29■■□□□ 1.48
SMG9-207ENST00000598860 SLC4A1APQ9BWU0 796 aaKnown RBP23.94■■□□□ 1.42
SMG9-207ENST00000598860 DNAJC5BQ9UF47 199 aa23.82■■□□□ 1.4
SMG9-207ENST00000598860 DCAF8L1A6NGE4 600 aa23.78■■□□□ 1.4
SMG9-207ENST00000598860 EHMT2Q96KQ7 1210 aa23.47■■□□□ 1.35
SMG9-207ENST00000598860 SLC4A2P04920 1241 aa23.25■■□□□ 1.31
SMG9-207ENST00000598860 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.19■■□□□ 1.3
SMG9-207ENST00000598860 ZBTB22O15209 634 aa23.12■■□□□ 1.29
SMG9-207ENST00000598860 FOXD4L1Q9NU39 408 aa23.11■■□□□ 1.29
SMG9-207ENST00000598860 CSRNP3Q8WYN3 585 aa23.04■■□□□ 1.28
SMG9-207ENST00000598860 U3KPZ7 1027 aaPredicted RBP22.81■■□□□ 1.24
SMG9-207ENST00000598860 MYCNP04198 464 aaPredicted RBP22.75■■□□□ 1.23
SMG9-207ENST00000598860 RNF39Q9H2S5 420 aa22.74■■□□□ 1.23
SMG9-207ENST00000598860 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.5■■□□□ 1.19
SMG9-207ENST00000598860 HNRNPUL2Q1KMD3 747 aaKnown RBP22.5■■□□□ 1.19
SMG9-207ENST00000598860 C1QBPQ07021 282 aaKnown RBP22.46■■□□□ 1.19
SMG9-207ENST00000598860 SAMD1Q6SPF0 538 aaPredicted RBP22.43■■□□□ 1.18
SMG9-207ENST00000598860 ATXN8OSP0DMR3 200 aa22.25■■□□□ 1.15
SMG9-207ENST00000598860 APLP2Q06481 763 aa22.25■■□□□ 1.15
SMG9-207ENST00000598860 SPINK5Q9NQ38 1064 aaPredicted RBP22.17■■□□□ 1.14
SMG9-207ENST00000598860 ATF5Q9Y2D1 282 aaPredicted RBP22.17■■□□□ 1.14
SMG9-207ENST00000598860 CACNB1Q02641 598 aaPredicted RBP22.15■■□□□ 1.14
SMG9-207ENST00000598860 CAPN15O75808 1086 aa22.09■■□□□ 1.13
SMG9-207ENST00000598860 TRHP20396 242 aaPredicted RBP22.01■■□□□ 1.11
SMG9-207ENST00000598860 ZNF219Q9P2Y4 722 aaPredicted RBP21.95■■□□□ 1.1
SMG9-207ENST00000598860 ABCB7O75027 752 aa21.69■■□□□ 1.06
SMG9-207ENST00000598860 DSG3P32926 999 aa21.68■■□□□ 1.06
SMG9-207ENST00000598860 CCDC180Q9P1Z9 1646 aa21.66■■□□□ 1.06
SMG9-207ENST00000598860 POLA2Q14181 598 aa21.64■■□□□ 1.05
SMG9-207ENST00000598860 ABCC9O60706 1549 aa21.39■■□□□ 1.01
SMG9-207ENST00000598860 ZBTB12Q9Y330 459 aaPredicted RBP21.23■□□□□ 0.99
SMG9-207ENST00000598860 FBLN2P98095 1184 aa21.21■□□□□ 0.99
SMG9-207ENST00000598860 MKRN4PQ13434 485 aaPredicted RBP21.19■□□□□ 0.98
SMG9-207ENST00000598860 OSCARQ8IYS5 282 aa20.91■□□□□ 0.94
SMG9-207ENST00000598860 FKBP8Q14318 412 aa20.85■□□□□ 0.93
SMG9-207ENST00000598860 SPDYE4A6NLX3 237 aa20.75■□□□□ 0.91
SMG9-207ENST00000598860 SPDYE2BA6NHP3 402 aa20.69■□□□□ 0.9
SMG9-207ENST00000598860 SPDYE6P0CI01 402 aa20.69■□□□□ 0.9
SMG9-207ENST00000598860 SPDYE2Q495Y8 402 aa20.69■□□□□ 0.9
SMG9-207ENST00000598860 ZNF692Q9BU19 519 aaPredicted RBP20.65■□□□□ 0.9
SMG9-207ENST00000598860 RBM42Q9BTD8 480 aaKnown RBP20.63■□□□□ 0.89
SMG9-207ENST00000598860 DCAF8L2P0C7V8 631 aa20.53■□□□□ 0.88
SMG9-207ENST00000598860 SSUH2Q9Y2M2 353 aa20.53■□□□□ 0.88
SMG9-207ENST00000598860 RB1CC1Q8TDY2 1594 aa20.49■□□□□ 0.87
SMG9-207ENST00000598860 NACADO15069 1562 aa20.43■□□□□ 0.86
SMG9-207ENST00000598860 AKT1S1Q96B36 256 aa20.4■□□□□ 0.86
SMG9-207ENST00000598860 PABPN1Q86U42 306 aaKnown RBP eCLIP20.38■□□□□ 0.85
SMG9-207ENST00000598860 PROM2Q8N271 834 aa20.36■□□□□ 0.85
SMG9-207ENST00000598860 ZCCHC6Q5VYS8 1495 aaKnown RBP20.25■□□□□ 0.83
SMG9-207ENST00000598860 MYO15BQ96JP2 1530 aa20.25■□□□□ 0.83
SMG9-207ENST00000598860 REM2Q8IYK8 340 aaPredicted RBP20.22■□□□□ 0.83
SMG9-207ENST00000598860 AMER1Q5JTC6 1135 aaPredicted RBP20.18■□□□□ 0.82
SMG9-207ENST00000598860 RTN4Q9NQC3 1192 aaKnown RBP20.17■□□□□ 0.82
SMG9-207ENST00000598860 DCAF1Q9Y4B6 1507 aa20.1■□□□□ 0.81
SMG9-207ENST00000598860 SPDYE1Q8NFV5 336 aaPredicted RBP20.07■□□□□ 0.8
SMG9-207ENST00000598860 FBXO3Q9UK99 471 aa20.05■□□□□ 0.8
SMG9-207ENST00000598860 CLEC11AQ9Y240 323 aa20.04■□□□□ 0.8
SMG9-207ENST00000598860 STAG3Q9UJ98 1225 aa20.02■□□□□ 0.8
SMG9-207ENST00000598860 PITPNM1O00562 1244 aa19.99■□□□□ 0.79
SMG9-207ENST00000598860 UNC13AQ9UPW8 1703 aa19.99■□□□□ 0.79
SMG9-207ENST00000598860 POTEHQ6S545 545 aa19.92■□□□□ 0.78
SMG9-207ENST00000598860 BICRAQ9NZM4 1560 aa19.85■□□□□ 0.77
SMG9-207ENST00000598860 PRR29P0C7W0 189 aa19.84■□□□□ 0.77
SMG9-207ENST00000598860 VASPP50552 380 aaPredicted RBP19.78■□□□□ 0.76
SMG9-207ENST00000598860 CHRDL2Q6WN34 429 aa19.77■□□□□ 0.76
SMG9-207ENST00000598860 SCRIBQ14160 1630 aa19.76■□□□□ 0.75
SMG9-207ENST00000598860 MIER1Q8N108 512 aa19.69■□□□□ 0.74
SMG9-207ENST00000598860 PLCD3Q8N3E9 789 aa19.67■□□□□ 0.74
SMG9-207ENST00000598860 SHROOM4Q9ULL8 1493 aa19.62■□□□□ 0.73
SMG9-207ENST00000598860 FXR2P51116 673 aaKnown RBP eCLIP19.59■□□□□ 0.73
SMG9-207ENST00000598860 CREBZFQ9NS37 354 aa19.58■□□□□ 0.72
SMG9-207ENST00000598860 PLEKHG5O94827 1062 aa19.56■□□□□ 0.72
SMG9-207ENST00000598860 SLC24A1O60721 1099 aa19.55■□□□□ 0.72
SMG9-207ENST00000598860 CHADLQ6NUI6 762 aa19.55■□□□□ 0.72
SMG9-207ENST00000598860 PIP4P2Q8N4L2 257 aa19.54■□□□□ 0.72
SMG9-207ENST00000598860 IFNLR1Q8IU57 520 aaPredicted RBP19.53■□□□□ 0.72
SMG9-207ENST00000598860 PRKAR2AP13861 404 aaKnown RBP19.51■□□□□ 0.71
SMG9-207ENST00000598860 KLHL34Q8N239 644 aa19.48■□□□□ 0.71
SMG9-207ENST00000598860 ZBTB47Q9UFB7 747 aaPredicted RBP19.4■□□□□ 0.7
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