RNA–Protein interactions for RNA: ENST00000419533.1

UBR4-206, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 5,583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-206ENST00000419533 DEXIO95424 95 aa9.54□□□□□ -0.88
UBR4-206ENST00000419533 KLHL40Q2TBA0 621 aa9.54□□□□□ -0.88
UBR4-206ENST00000419533 USP48Q86UV5 1035 aa9.54□□□□□ -0.88
UBR4-206ENST00000419533 SUCLG2Q96I99 432 aa9.54□□□□□ -0.88
UBR4-206ENST00000419533 ZKSCAN3Q9BRR0 538 aa9.54□□□□□ -0.88
UBR4-206ENST00000419533 ATL3Q6DD88 541 aa9.54□□□□□ -0.88
UBR4-206ENST00000419533 FAM212AQ96EL1 285 aa9.54□□□□□ -0.88
UBR4-206ENST00000419533 AATFQ9NY61 560 aaKnown RBP eCLIP9.54□□□□□ -0.88
UBR4-206ENST00000419533 CNPY2Q9Y2B0 182 aa9.54□□□□□ -0.88
UBR4-206ENST00000419533 GOLGA6L10A0A0M3HER8 536 aa9.54□□□□□ -0.88
UBR4-206ENST00000419533 ECM2O94769 699 aaPredicted RBP9.54□□□□□ -0.88
UBR4-206ENST00000419533 GIGYF2Q6Y7W6 1299 aaKnown RBP9.54□□□□□ -0.88
UBR4-206ENST00000419533 LZTS2Q9BRK4 669 aa9.54□□□□□ -0.88
UBR4-206ENST00000419533 MTFR1LQ9H019 292 aa9.54□□□□□ -0.88
UBR4-206ENST00000419533 ARHGEF28Q8N1W1 1705 aaKnown RBP9.54□□□□□ -0.88
UBR4-206ENST00000419533 RLBP1P12271 317 aa9.54□□□□□ -0.88
UBR4-206ENST00000419533 RPL13P26373 211 aaKnown RBP9.54□□□□□ -0.88
UBR4-206ENST00000419533 SP4Q02446 784 aa9.54□□□□□ -0.88
UBR4-206ENST00000419533 TAF12Q16514 161 aa9.54□□□□□ -0.88
UBR4-206ENST00000419533 POTEAQ6S8J7 498 aa9.54□□□□□ -0.88
UBR4-206ENST00000419533 IQUBQ8NA54 791 aa9.54□□□□□ -0.88
UBR4-206ENST00000419533 MASTLQ96GX5 879 aa9.54□□□□□ -0.88
UBR4-206ENST00000419533 TSNARE1Q96NA8 513 aa9.54□□□□□ -0.88
UBR4-206ENST00000419533 ROBO1Q9Y6N7 1651 aa9.54□□□□□ -0.88
UBR4-206ENST00000419533 B4E1Z4 1266 aa9.53□□□□□ -0.88
UBR4-206ENST00000419533 ATP2B4P23634 1241 aa9.53□□□□□ -0.88
UBR4-206ENST00000419533 CTSWP56202 376 aa9.53□□□□□ -0.88
UBR4-206ENST00000419533 KCNQ4P56696 695 aa9.53□□□□□ -0.88
UBR4-206ENST00000419533 PPP2R5BQ15173 497 aa9.53□□□□□ -0.88
UBR4-206ENST00000419533 ZNF354CQ86Y25 554 aa9.53□□□□□ -0.88
UBR4-206ENST00000419533 CCDC65Q8IXS2 484 aa9.53□□□□□ -0.88
UBR4-206ENST00000419533 SSX2IPQ9Y2D8 614 aa9.53□□□□□ -0.88
UBR4-206ENST00000419533 IBTKQ9P2D0 1353 aaPredicted RBP9.53□□□□□ -0.88
UBR4-206ENST00000419533 GPAA1O43292 621 aa9.53□□□□□ -0.88
UBR4-206ENST00000419533 PPP1R2P41236 205 aa9.53□□□□□ -0.88
UBR4-206ENST00000419533 PLCD1P51178 756 aa9.53□□□□□ -0.88
UBR4-206ENST00000419533 FMNL3Q8IVF7 1028 aa9.53□□□□□ -0.88
UBR4-206ENST00000419533 AS3MTQ9HBK9 375 aa9.53□□□□□ -0.88
UBR4-206ENST00000419533 COL15A1P39059 1388 aa9.53□□□□□ -0.88
UBR4-206ENST00000419533 BBOX1O75936 387 aa9.53□□□□□ -0.88
UBR4-206ENST00000419533 ADCY5O95622 1261 aa9.53□□□□□ -0.88
UBR4-206ENST00000419533 MAP2K1Q02750 393 aaPredicted RBP9.53□□□□□ -0.88
UBR4-206ENST00000419533 HAUS3Q68CZ6 603 aa9.53□□□□□ -0.88
UBR4-206ENST00000419533 CEP83Q9Y592 693 aa9.53□□□□□ -0.88
UBR4-206ENST00000419533 PPEF1O14829 653 aaPredicted RBP9.53□□□□□ -0.88
UBR4-206ENST00000419533 SLC1A4P43007 532 aa9.53□□□□□ -0.88
UBR4-206ENST00000419533 SMTNP53814 917 aa9.53□□□□□ -0.88
UBR4-206ENST00000419533 HLTFQ14527 1009 aaKnown RBP eCLIP9.53□□□□□ -0.883e-7■□□□□ 10.7
UBR4-206ENST00000419533 KIAA0753Q2KHM9 967 aa9.53□□□□□ -0.88
UBR4-206ENST00000419533 LETM2Q2VYF4 491 aa9.53□□□□□ -0.88
UBR4-206ENST00000419533 SV2BQ7L1I2 683 aa9.53□□□□□ -0.88
UBR4-206ENST00000419533 TNNQ9UQP3 1299 aa9.53□□□□□ -0.88
UBR4-206ENST00000419533 KNDC1Q76NI1 1749 aa9.53□□□□□ -0.88
UBR4-206ENST00000419533 RXRAP19793 462 aa9.53□□□□□ -0.88
UBR4-206ENST00000419533 LMBR1Q8WVP7 490 aa9.53□□□□□ -0.88
UBR4-206ENST00000419533 JADE2Q9NQC1 790 aa9.53□□□□□ -0.88
UBR4-206ENST00000419533 NOP56O00567 594 aaKnown RBP9.52□□□□□ -0.88
UBR4-206ENST00000419533 STAMBPO95630 424 aa9.52□□□□□ -0.88
UBR4-206ENST00000419533 KBTBD3Q8NAB2 608 aa9.52□□□□□ -0.88
UBR4-206ENST00000419533 TEKT1Q969V4 418 aa9.52□□□□□ -0.88
UBR4-206ENST00000419533 COL5A2P05997 1499 aaPredicted RBP9.52□□□□□ -0.89
UBR4-206ENST00000419533 CARMIL3Q8ND23 1372 aa9.52□□□□□ -0.89
UBR4-206ENST00000419533 ADGRB2O60241 1585 aa9.52□□□□□ -0.89
UBR4-206ENST00000419533 RPS6KB1P23443 525 aa9.52□□□□□ -0.89
UBR4-206ENST00000419533 IRX3P78415 501 aaPredicted RBP9.52□□□□□ -0.89
UBR4-206ENST00000419533 EAPPQ56P03 285 aaPredicted RBP9.52□□□□□ -0.89
UBR4-206ENST00000419533 RILPL1Q5EBL4 403 aa9.52□□□□□ -0.89
UBR4-206ENST00000419533 FCHSD1Q86WN1 690 aa9.52□□□□□ -0.89
UBR4-206ENST00000419533 CCDC24Q8N4L8 307 aa9.52□□□□□ -0.89
UBR4-206ENST00000419533 INTS4Q96HW7 963 aaKnown RBP9.52□□□□□ -0.89
UBR4-206ENST00000419533 TRMT1Q9NXH9 659 aaKnown RBP9.52□□□□□ -0.89
UBR4-206ENST00000419533 CSADQ9Y600 493 aa9.52□□□□□ -0.89
UBR4-206ENST00000419533 RNF123Q5XPI4 1314 aa9.52□□□□□ -0.89
UBR4-206ENST00000419533 TNS2Q63HR2 1409 aa9.52□□□□□ -0.89
UBR4-206ENST00000419533 FSD2A1L4K1 749 aa9.52□□□□□ -0.89
UBR4-206ENST00000419533 SMC1AQ14683 1233 aaKnown RBP9.52□□□□□ -0.89
UBR4-206ENST00000419533 GIMAP6Q6P9H5 292 aa9.52□□□□□ -0.89
UBR4-206ENST00000419533 TRIM35Q9UPQ4 493 aa9.52□□□□□ -0.89
UBR4-206ENST00000419533 NEURL1BA8MQ27 555 aa9.52□□□□□ -0.89
UBR4-206ENST00000419533 DNM1Q05193 864 aaKnown RBP9.52□□□□□ -0.89
UBR4-206ENST00000419533 LRSAM1Q6UWE0 723 aa9.52□□□□□ -0.89
UBR4-206ENST00000419533 KLHDC4Q8TBB5 520 aa9.52□□□□□ -0.89
UBR4-206ENST00000419533 SLC5A4Q9NY91 659 aa9.52□□□□□ -0.89
UBR4-206ENST00000419533 ANGEL1Q9UNK9 670 aaKnown RBP9.52□□□□□ -0.89
UBR4-206ENST00000419533 PLSCR1O15162 318 aa9.51□□□□□ -0.89
UBR4-206ENST00000419533 PCCAP05165 728 aaPredicted RBP9.51□□□□□ -0.89
UBR4-206ENST00000419533 CCT6AP40227 531 aaKnown RBP9.51□□□□□ -0.89
UBR4-206ENST00000419533 ZYXQ15942 572 aaKnown RBP9.51□□□□□ -0.89
UBR4-206ENST00000419533 SPECC1Q5M775 1068 aa9.51□□□□□ -0.89
UBR4-206ENST00000419533 ZBTB38Q8NAP3 1195 aaPredicted RBP9.51□□□□□ -0.89
UBR4-206ENST00000419533 IFT74Q96LB3 600 aa9.51□□□□□ -0.89
UBR4-206ENST00000419533 SELENOOQ9BVL4 669 aa9.51□□□□□ -0.89
UBR4-206ENST00000419533 PKD2L1Q9P0L9 805 aa9.51□□□□□ -0.89
UBR4-206ENST00000419533 ARPP21Q9UBL0 812 aaPredicted RBP9.51□□□□□ -0.89
UBR4-206ENST00000419533 DYNC1I1O14576 645 aa9.51□□□□□ -0.89
UBR4-206ENST00000419533 KCNQ3O43525 872 aa9.51□□□□□ -0.89
UBR4-206ENST00000419533 SNW1Q13573 536 aaKnown RBP9.51□□□□□ -0.89
UBR4-206ENST00000419533 ARHGEF1Q92888 912 aaKnown RBP9.51□□□□□ -0.89
UBR4-206ENST00000419533 HOMER2Q9NSB8 354 aa9.51□□□□□ -0.89
UBR4-206ENST00000419533 DACT1Q9NYF0 836 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms