RNA–Protein interactions for RNA: ENST00000378610.1

CDKAL1-202, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDKAL1, Length 3,115 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-202ENST00000378610 NBPF4Q96M43 638 aa7.67□□□□□ -1.18
CDKAL1-202ENST00000378610 EIF3CQ99613 913 aaKnown RBP7.67□□□□□ -1.18
CDKAL1-202ENST00000378610 A1CFQ9NQ94 594 aaKnown RBP7.67□□□□□ -1.18
CDKAL1-202ENST00000378610 EMILIN1Q9Y6C2 1016 aa7.67□□□□□ -1.18
CDKAL1-202ENST00000378610 ECM29Q5VYK3 1845 aa7.67□□□□□ -1.18
CDKAL1-202ENST00000378610 GJA5P36382 358 aa7.67□□□□□ -1.18
CDKAL1-202ENST00000378610 BRD3Q15059 726 aa7.67□□□□□ -1.18
CDKAL1-202ENST00000378610 PLEKHG4Q58EX7 1191 aa7.67□□□□□ -1.18
CDKAL1-202ENST00000378610 MSANTD4Q8NCY6 345 aa7.67□□□□□ -1.18
CDKAL1-202ENST00000378610 MPHOSPH8Q99549 860 aa7.67□□□□□ -1.18
CDKAL1-202ENST00000378610 PDRG1Q9NUG6 133 aa7.67□□□□□ -1.18
CDKAL1-202ENST00000378610 RCOR1Q9UKL0 485 aa7.67□□□□□ -1.18
CDKAL1-202ENST00000378610 ATXN2Q99700 1313 aaKnown RBP7.67□□□□□ -1.18
CDKAL1-202ENST00000378610 VWA3AA6NCI4 1184 aa7.67□□□□□ -1.18
CDKAL1-202ENST00000378610 VIL1P09327 827 aaKnown RBP7.67□□□□□ -1.18
CDKAL1-202ENST00000378610 TNNT3P45378 269 aaPredicted RBP7.67□□□□□ -1.18
CDKAL1-202ENST00000378610 SAFB2Q14151 953 aaKnown RBP eCLIP7.67□□□□□ -1.189e-7■■■■□ 22.7
CDKAL1-202ENST00000378610 NCAPHQ15003 741 aa7.67□□□□□ -1.18
CDKAL1-202ENST00000378610 BEND6Q5SZJ8 279 aaPredicted RBP7.67□□□□□ -1.18
CDKAL1-202ENST00000378610 PRPF38BQ5VTL8 546 aaKnown RBP7.67□□□□□ -1.18
CDKAL1-202ENST00000378610 TTC39BQ5VTQ0 682 aaPredicted RBP7.67□□□□□ -1.18
CDKAL1-202ENST00000378610 ATL3Q6DD88 541 aa7.67□□□□□ -1.18
CDKAL1-202ENST00000378610 MCTP2Q6DN12 878 aa7.67□□□□□ -1.18
CDKAL1-202ENST00000378610 TMC4Q7Z404 712 aa7.67□□□□□ -1.18
CDKAL1-202ENST00000378610 EFCAB13Q8IY85 973 aa7.67□□□□□ -1.18
CDKAL1-202ENST00000378610 CHMP4CQ96CF2 233 aa7.67□□□□□ -1.18
CDKAL1-202ENST00000378610 TACO1Q9BSH4 297 aaKnown RBP7.67□□□□□ -1.18
CDKAL1-202ENST00000378610 TRMT1Q9NXH9 659 aaKnown RBP7.67□□□□□ -1.18
CDKAL1-202ENST00000378610 FAM83GA6ND36 823 aa7.66□□□□□ -1.18
CDKAL1-202ENST00000378610 ELL2O00472 640 aaPredicted RBP7.66□□□□□ -1.18
CDKAL1-202ENST00000378610 NCOA4Q13772 614 aa7.66□□□□□ -1.18
CDKAL1-202ENST00000378610 SYCP2LQ5T4T6 812 aa7.66□□□□□ -1.18
CDKAL1-202ENST00000378610 MMS22LQ6ZRQ5 1243 aa7.66□□□□□ -1.18
CDKAL1-202ENST00000378610 RBM33Q96EV2 1170 aaKnown RBP7.66□□□□□ -1.18
CDKAL1-202ENST00000378610 TMEM106CQ9BVX2 250 aa7.66□□□□□ -1.18
CDKAL1-202ENST00000378610 GOLPH3LQ9H4A5 285 aa7.66□□□□□ -1.18
CDKAL1-202ENST00000378610 C4AP0C0L4 1744 aa7.66□□□□□ -1.18
CDKAL1-202ENST00000378610 C4BP0C0L5 1744 aa7.66□□□□□ -1.18
CDKAL1-202ENST00000378610 MARF1Q9Y4F3 1742 aaKnown RBP7.66□□□□□ -1.18
CDKAL1-202ENST00000378610 TECPR2O15040 1411 aa7.66□□□□□ -1.18
CDKAL1-202ENST00000378610 POLR3GO15318 223 aaPredicted RBP7.66□□□□□ -1.18
CDKAL1-202ENST00000378610 EVI5O60447 810 aa7.66□□□□□ -1.18
CDKAL1-202ENST00000378610 IFIT2P09913 472 aaKnown RBP7.66□□□□□ -1.18
CDKAL1-202ENST00000378610 APOBRQ0VD83 1088 aa7.66□□□□□ -1.18
CDKAL1-202ENST00000378610 SERINC3Q13530 473 aa7.66□□□□□ -1.18
CDKAL1-202ENST00000378610 TOB2Q14106 344 aaPredicted RBP7.66□□□□□ -1.18
CDKAL1-202ENST00000378610 LARP1BQ659C4 914 aaKnown RBP7.66□□□□□ -1.18
CDKAL1-202ENST00000378610 PADI6Q6TGC4 694 aa7.66□□□□□ -1.18
CDKAL1-202ENST00000378610 LRRC31Q6UY01 552 aa7.66□□□□□ -1.18
CDKAL1-202ENST00000378610 ZNF594Q96JF6 807 aaPredicted RBP7.66□□□□□ -1.18
CDKAL1-202ENST00000378610 ZBTB3Q9H5J0 574 aa7.66□□□□□ -1.18
CDKAL1-202ENST00000378610 KANSL2Q9H9L4 492 aa7.66□□□□□ -1.18
CDKAL1-202ENST00000378610 JADE2Q9NQC1 790 aa7.66□□□□□ -1.18
CDKAL1-202ENST00000378610 MED23Q9ULK4 1368 aa7.66□□□□□ -1.18
CDKAL1-202ENST00000378610 NCAPD2Q15021 1401 aa7.66□□□□□ -1.18
CDKAL1-202ENST00000378610 C2orf72A6NCS6 295 aa7.65□□□□□ -1.18
CDKAL1-202ENST00000378610 SHOX2O60902 331 aaPredicted RBP7.65□□□□□ -1.18
CDKAL1-202ENST00000378610 FMNL1O95466 1100 aaPredicted RBP7.65□□□□□ -1.18
CDKAL1-202ENST00000378610 CCDC91Q7Z6B0 441 aa7.65□□□□□ -1.18
CDKAL1-202ENST00000378610 SDR16C5Q8N3Y7 309 aa7.65□□□□□ -1.18
CDKAL1-202ENST00000378610 MAP4K1Q92918 833 aa7.65□□□□□ -1.18
CDKAL1-202ENST00000378610 RILPL2Q969X0 211 aa7.65□□□□□ -1.18
CDKAL1-202ENST00000378610 EPAS1Q99814 870 aa7.65□□□□□ -1.18
CDKAL1-202ENST00000378610 PARD6BQ9BYG5 372 aa7.65□□□□□ -1.18
CDKAL1-202ENST00000378610 ARHGEF10LQ9HCE6 1279 aa7.65□□□□□ -1.18
CDKAL1-202ENST00000378610 TYW1Q9NV66 732 aaKnown RBP7.65□□□□□ -1.18
CDKAL1-202ENST00000378610 ANO10Q9NW15 660 aa7.65□□□□□ -1.18
CDKAL1-202ENST00000378610 GOLGA6L19H0YKK7 550 aa7.65□□□□□ -1.18
CDKAL1-202ENST00000378610 LDHBP07195 334 aaKnown RBP7.65□□□□□ -1.18
CDKAL1-202ENST00000378610 TXLNAP40222 546 aa7.65□□□□□ -1.18
CDKAL1-202ENST00000378610 PTH1RQ03431 593 aa7.65□□□□□ -1.18
CDKAL1-202ENST00000378610 FMR1Q06787 632 aaKnown RBP eCLIP7.65□□□□□ -1.181e-12■■■■□ 24.2
CDKAL1-202ENST00000378610 LONRF2Q1L5Z9 754 aa7.65□□□□□ -1.18
CDKAL1-202ENST00000378610 CAPN12Q6ZSI9 719 aa7.65□□□□□ -1.18
CDKAL1-202ENST00000378610 SMARCC2Q8TAQ2 1214 aa7.65□□□□□ -1.18
CDKAL1-202ENST00000378610 SETDB2Q96T68 719 aa7.65□□□□□ -1.18
CDKAL1-202ENST00000378610 CXorf56Q9H5V9 222 aa7.65□□□□□ -1.18
CDKAL1-202ENST00000378610 ARFGAP3Q9NP61 516 aa7.65□□□□□ -1.18
CDKAL1-202ENST00000378610 PRKAB1Q9Y478 270 aa7.65□□□□□ -1.18
CDKAL1-202ENST00000378610 CYP46A1Q9Y6A2 500 aa7.65□□□□□ -1.18
CDKAL1-202ENST00000378610 CD53P19397 219 aa7.65□□□□□ -1.19
CDKAL1-202ENST00000378610 AARSP49588 968 aaKnown RBP eCLIP7.65□□□□□ -1.19
CDKAL1-202ENST00000378610 EVCP57679 992 aa7.65□□□□□ -1.19
CDKAL1-202ENST00000378610 TBX2Q13207 712 aaPredicted RBP7.65□□□□□ -1.19
CDKAL1-202ENST00000378610 FOXR1Q6PIV2 292 aa7.65□□□□□ -1.19
CDKAL1-202ENST00000378610 FRMD6Q96NE9 622 aa7.65□□□□□ -1.19
CDKAL1-202ENST00000378610 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.65□□□□□ -1.192e-6■■■□□ 14.9
CDKAL1-202ENST00000378610 ANKZF1Q9H8Y5 726 aa7.65□□□□□ -1.19
CDKAL1-202ENST00000378610 CXXC1Q9P0U4 656 aaPredicted RBP7.65□□□□□ -1.19
CDKAL1-202ENST00000378610 KLF15Q9UIH9 416 aa7.65□□□□□ -1.19
CDKAL1-202ENST00000378610 L1RE1Q9UN81 338 aa7.65□□□□□ -1.19
CDKAL1-202ENST00000378610 AKAP2Q9Y2D5 859 aa7.65□□□□□ -1.19
CDKAL1-202ENST00000378610 IKBKBO14920 756 aa7.64□□□□□ -1.19
CDKAL1-202ENST00000378610 MYO1BO43795 1136 aa7.64□□□□□ -1.19
CDKAL1-202ENST00000378610 HMOX1P09601 288 aa7.64□□□□□ -1.19
CDKAL1-202ENST00000378610 CPA1P15085 419 aa7.64□□□□□ -1.19
CDKAL1-202ENST00000378610 KCNH2Q12809 1159 aa7.64□□□□□ -1.19
CDKAL1-202ENST00000378610 TRDNQ13061 729 aa7.64□□□□□ -1.19
CDKAL1-202ENST00000378610 CCSAPQ6IQ19 270 aaPredicted RBP7.64□□□□□ -1.19
CDKAL1-202ENST00000378610 FMR1NBQ8N0W7 255 aaPredicted RBP7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms