RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 Duox1A2AQ92 1551 aa8.04□□□□□ -1.12
Bdnf-201ENSMUST00000053317 VirmaA2AIV2 1811 aaKnown RBP8.04□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Cxcl9P18340 126 aa8.04□□□□□ -1.12
Bdnf-201ENSMUST00000053317 CgnP59242 1191 aa8.04□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Ifit2Q64112 472 aa8.04□□□□□ -1.12
Bdnf-201ENSMUST00000053317 9230110C19RikQ8CC70 267 aa8.04□□□□□ -1.12
Bdnf-201ENSMUST00000053317 C8aQ8K182 587 aa8.04□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Txnrd2Q9JLT4 524 aa8.04□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Ak2Q9WTP6 239 aa8.04□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Nmt2O70311 529 aa8.03□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Pde11aP0C1Q2 933 aa8.03□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Rpusd2Q149F1 553 aa8.03□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Hs1bp3Q3TC93 395 aa8.03□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Clul1Q3ZRW6 464 aa8.03□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Tigd5Q499M4 642 aa8.03□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Slc10a5Q5PT54 434 aa8.03□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Nme8Q715T0 586 aa8.03□□□□□ -1.12
Bdnf-201ENSMUST00000053317 WdpcpQ8C456 722 aa8.03□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Vps53Q8CCB4 832 aa8.03□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Igf2bp3Q9CPN8 579 aaKnown RBP8.03□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Znf287Q9EQB9 759 aa8.03□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Ubr2Q6WKZ8 1755 aa8.03□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Prr16A3KMN5 304 aa8.03□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Ttll4Q80UG8 1193 aa8.03□□□□□ -1.12
Bdnf-201ENSMUST00000053317 MyocdQ8VIM5 935 aa8.03□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Tgm5Q9D7I9 724 aa8.03□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Znf521Q6KAS7 1311 aa8.03□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Nphp3Q7TNH6 1325 aa8.03□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Ano3A2AHL1 981 aa8.03□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Fdx1P46656 188 aa8.03□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Snap25P60879 206 aa8.03□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Oxr1Q4KMM3 866 aa8.03□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Gm11437Q5QR91 290 aa8.03□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Usp50Q6P8X6 390 aa8.03□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Pof1bQ8K4L4 587 aa8.03□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Cdk8Q8R3L8 464 aa8.03□□□□□ -1.12
Bdnf-201ENSMUST00000053317 SetQ9EQU5 289 aaKnown RBP8.03□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Acot3Q9QYR7 432 aa8.03□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Mtcl1Q3UHU5 1945 aa8.03□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Flot1O08917 428 aa8.03□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Adgre1Q61549 931 aa8.03□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Vps37dQ810I0 261 aa8.03□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Liat1Q810M6 228 aa8.03□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Kiaa0232Q80U59 1396 aaKnown RBP8.03□□□□□ -1.12
Bdnf-201ENSMUST00000053317 Ubr3Q5U430 1889 aa8.02□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Igfbp4P47879 254 aa8.02□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Atoh1P48985 351 aa8.02□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Eepd1Q3TGW2 569 aa8.02□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Yars2Q8BYL4 472 aaKnown RBP8.02□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Fez1Q8K0X8 392 aa8.02□□□□□ -1.13
Bdnf-201ENSMUST00000053317 GrapQ9CX99 217 aa8.02□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Rnf181Q9CY62 165 aa8.02□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Phf14Q9D4H9 881 aa8.02□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Mrvi1Q9WUX5 899 aaKnown RBP8.02□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Ugt1a5B2RT14 529 aa8.02□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Nfil3O08750 462 aa8.02□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Cyp2d9P11714 504 aa8.02□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Siah1aP61092 282 aa8.02□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Rc3h1Q4VGL6 1130 aaKnown RBP8.02□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Specc1Q5SXY1 1067 aa8.02□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Tmem79Q9D709 391 aa8.02□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Tmod4Q9JLH8 345 aa8.02□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Add2Q9QYB8 725 aa8.02□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Tbc1d8bA3KGB4 1114 aa8.02□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Kctd1Q5M956 257 aa8.02□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Olfr118Q7TRJ6 321 aa8.02□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Gpcpd1Q8C0L9 675 aa8.02□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Mb21d2Q8C525 428 aa8.02□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Dph6Q9CQ28 267 aa8.02□□□□□ -1.13
Bdnf-201ENSMUST00000053317 WtapQ9ER69 396 aa8.02□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Psma5Q9Z2U1 241 aaKnown RBP8.02□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Cyp2d10P24456 504 aa8.01□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Cplx2P84086 134 aa8.01□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Gjb2Q00977 226 aa8.01□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Slc4a7Q8BTY2 1034 aa8.01□□□□□ -1.13
Bdnf-201ENSMUST00000053317 CrebrfQ8CDG5 640 aaKnown RBP8.01□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Il31raQ8K5B1 716 aa8.01□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Pmfbp1Q9WVQ0 1022 aa8.01□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Babam1Q3UI43 333 aa8.01□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Spata5Q3UMC0 893 aaKnown RBP8.01□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Taf3Q5HZG4 932 aa8.01□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Ctr9Q62018 1173 aaKnown RBP8.01□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Triml1Q8BVP1 470 aa8.01□□□□□ -1.13
Bdnf-201ENSMUST00000053317 H2-Q4Q8HWB2 354 aa8.01□□□□□ -1.13
Bdnf-201ENSMUST00000053317 EhhadhQ9DBM2 718 aa8.01□□□□□ -1.13
Bdnf-201ENSMUST00000053317 NinQ61043 2035 aa8.01□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Cfap99A0A140LIX9 648 aa8.01□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Fam186bD3Z420 943 aa8.01□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Prpmp5E9PXN1 296 aa8.01□□□□□ -1.13
Bdnf-201ENSMUST00000053317 VegfbP49766 207 aa8.01□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Nucb1Q02819 459 aaKnown RBP8.01□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Haus6Q6NV99 933 aaKnown RBP8.01□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Trmt2aQ8BNV1 574 aaKnown RBP8.01□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Ndufv1Q91YT0 464 aa8.01□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Heg1E9Q7X6 1337 aa8.01□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Gm15262A0A140LIQ5 728 aa8□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Parp2O88554 559 aa8□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Atp11aP98197 1187 aa8□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Glra4Q61603 456 aa8□□□□□ -1.13
Bdnf-201ENSMUST00000053317 Bst2Q8R2Q8 172 aa8□□□□□ -1.13
Retrieved 100 of 22,080 RNA–protein pairs in 23.6 ms