RNA–Protein interactions for RNA: ENSMUST00000167671.1

Ckap4-202, Transcript of Cytoskeleton-associated protein 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ckap4, Length 2,606 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4-202ENSMUST00000167671 S100a4P07091 101 aa13.29□□□□□ -0.28
Ckap4-202ENSMUST00000167671 Rs1Q9Z1L4 224 aa13.29□□□□□ -0.28
Ckap4-202ENSMUST00000167671 Gm12845A0A0N4SUM5 588 aa13.28□□□□□ -0.28
Ckap4-202ENSMUST00000167671 TshbP12656 138 aa13.28□□□□□ -0.28
Ckap4-202ENSMUST00000167671 Defa24Q5G865 93 aa13.28□□□□□ -0.28
Ckap4-202ENSMUST00000167671 TctaQ8VEA7 122 aa13.28□□□□□ -0.28
Ckap4-202ENSMUST00000167671 Ighv3-1A0A075B5S6 116 aa13.28□□□□□ -0.28
Ckap4-202ENSMUST00000167671 Ighv1-4A0A075B5T4 117 aa13.28□□□□□ -0.28
Ckap4-202ENSMUST00000167671 Ighv1-53A0A075B5W3 117 aa13.28□□□□□ -0.28
Ckap4-202ENSMUST00000167671 Trav7-2Q5R1I3 112 aa13.28□□□□□ -0.28
Ckap4-202ENSMUST00000167671 Iglc1A0A0G2JE99 106 aa13.27□□□□□ -0.28
Ckap4-202ENSMUST00000167671 P01843 105 aa13.27□□□□□ -0.28
Ckap4-202ENSMUST00000167671 Cox7cP17665 63 aa13.27□□□□□ -0.28
Ckap4-202ENSMUST00000167671 Gm14137Q8CE97 175 aa13.27□□□□□ -0.28
Ckap4-202ENSMUST00000167671 LbhQ9CX60 105 aa13.27□□□□□ -0.28
Ckap4-202ENSMUST00000167671 Tcf24V9GWT9 166 aa13.27□□□□□ -0.28
Ckap4-202ENSMUST00000167671 Ighv1-74A0A0G2JGK2 117 aa13.27□□□□□ -0.29
Ckap4-202ENSMUST00000167671 Ang5Q5GAN1 145 aa13.27□□□□□ -0.29
Ckap4-202ENSMUST00000167671 Gm9970F6ZED4 185 aa13.26□□□□□ -0.29
Ckap4-202ENSMUST00000167671 Olfr312Q7TRZ9 308 aa13.26□□□□□ -0.29
Ckap4-202ENSMUST00000167671 Mrpl36Q99N90 102 aa13.26□□□□□ -0.29
Ckap4-202ENSMUST00000167671 Obox1Q9D350 204 aa13.26□□□□□ -0.29
Ckap4-202ENSMUST00000167671 Igkv20-101-2A0A0G2JDU3 113 aa13.26□□□□□ -0.29
Ckap4-202ENSMUST00000167671 Igkv4-71A0A0G2JEH0 117 aa13.26□□□□□ -0.29
Ckap4-202ENSMUST00000167671 P01725 110 aa13.26□□□□□ -0.29
Ckap4-202ENSMUST00000167671 Cdx4Q07424 282 aa13.26□□□□□ -0.29
Ckap4-202ENSMUST00000167671 Tal2Q62282 108 aa13.26□□□□□ -0.29
Ckap4-202ENSMUST00000167671 Rpl11Q9CXW4 178 aaKnown RBP13.26□□□□□ -0.29
Ckap4-202ENSMUST00000167671 RhohQ9D3G9 191 aa13.26□□□□□ -0.29
Ckap4-202ENSMUST00000167671 Ighv3-4A0A0A6YXF1 117 aa13.26□□□□□ -0.29
Ckap4-202ENSMUST00000167671 Arhgap32Q811P8 2089 aa13.25□□□□□ -0.29
Ckap4-202ENSMUST00000167671 Gm5878E9PUB3 99 aa13.25□□□□□ -0.29
Ckap4-202ENSMUST00000167671 Spink13Q3UTS8 97 aa13.25□□□□□ -0.29
Ckap4-202ENSMUST00000167671 Zfp248Q640N4 576 aa13.25□□□□□ -0.29
Ckap4-202ENSMUST00000167671 Rbmxl2Q9DAE2 385 aaKnown RBP13.25□□□□□ -0.29
Ckap4-202ENSMUST00000167671 Sptan1P16546 2472 aaKnown RBP13.25□□□□□ -0.29
Ckap4-202ENSMUST00000167671 Qrich2A0A140LIY9 2337 aa13.25□□□□□ -0.29
Ckap4-202ENSMUST00000167671 PolP10400 120 aa13.25□□□□□ -0.29
Ckap4-202ENSMUST00000167671 HilpdaQ9JLS0 64 aa13.25□□□□□ -0.29
Ckap4-202ENSMUST00000167671 Gm44965A0A0N4SVR3 59 aa13.24□□□□□ -0.29
Ckap4-202ENSMUST00000167671 Gm45753A0A1C7CYU8 86 aa13.24□□□□□ -0.29
Ckap4-202ENSMUST00000167671 Csn3P06796 181 aa13.24□□□□□ -0.29
Ckap4-202ENSMUST00000167671 Defa3P28310 93 aa13.24□□□□□ -0.29
Ckap4-202ENSMUST00000167671 Edn3P48299 214 aa13.24□□□□□ -0.29
Ckap4-202ENSMUST00000167671 Defa10P50708 93 aa13.24□□□□□ -0.29
Ckap4-202ENSMUST00000167671 Defa15P50713 93 aa13.24□□□□□ -0.29
Ckap4-202ENSMUST00000167671 Q4KKZ1 196 aa13.24□□□□□ -0.29
Ckap4-202ENSMUST00000167671 Prss41Q920S2 322 aa13.24□□□□□ -0.29
Ckap4-202ENSMUST00000167671 Mustn1Q99JI1 82 aa13.24□□□□□ -0.29
Ckap4-202ENSMUST00000167671 4930447F04RikA2AFR2 126 aa13.24□□□□□ -0.29
Ckap4-202ENSMUST00000167671 Umad1E0CX23 159 aa13.23□□□□□ -0.29
Ckap4-202ENSMUST00000167671 Smim1P0C8K7 78 aa13.23□□□□□ -0.29
Ckap4-202ENSMUST00000167671 Defa26Q3L180 93 aa13.23□□□□□ -0.29
Ckap4-202ENSMUST00000167671 Tcf15Q60756 195 aa13.23□□□□□ -0.29
Ckap4-202ENSMUST00000167671 Sumo2P61957 95 aaKnown RBP13.23□□□□□ -0.29
Ckap4-202ENSMUST00000167671 Tex26Q0VB26 296 aa13.23□□□□□ -0.29
Ckap4-202ENSMUST00000167671 Ubtd1Q91WB7 227 aa13.23□□□□□ -0.29
Ckap4-202ENSMUST00000167671 Pgpep1lQ9CWB5 130 aa13.23□□□□□ -0.29
Ckap4-202ENSMUST00000167671 SonQ9QX47 2444 aaKnown RBP13.22□□□□□ -0.29
Ckap4-202ENSMUST00000167671 Ighv1-9A0A0A6YW37 117 aa13.22□□□□□ -0.29
Ckap4-202ENSMUST00000167671 Insl3O09107 122 aa13.22□□□□□ -0.29
Ckap4-202ENSMUST00000167671 Ube2e1P52482 193 aa13.22□□□□□ -0.29
Ckap4-202ENSMUST00000167671 Ndufa4Q62425 82 aaKnown RBP13.22□□□□□ -0.29
Ckap4-202ENSMUST00000167671 Q9CX63 252 aa13.22□□□□□ -0.29
Ckap4-202ENSMUST00000167671 Nit2Q9JHW2 276 aa13.22□□□□□ -0.29
Ckap4-202ENSMUST00000167671 Gm10271F6WY25 52 aa13.22□□□□□ -0.29
Ckap4-202ENSMUST00000167671 Tmem170bP86050 132 aa13.22□□□□□ -0.29
Ckap4-202ENSMUST00000167671 FshbQ60687 130 aa13.22□□□□□ -0.29
Ckap4-202ENSMUST00000167671 Prr3Q811B5 190 aaKnown RBP13.22□□□□□ -0.29
Ckap4-202ENSMUST00000167671 Chac1Q8R3J5 223 aa13.22□□□□□ -0.29
Ckap4-202ENSMUST00000167671 Ighv1-80A0A075B5Y3 117 aa13.21□□□□□ -0.29
Ckap4-202ENSMUST00000167671 Trbv13-1A0A0B4J1P8 112 aa13.21□□□□□ -0.29
Ckap4-202ENSMUST00000167671 Tnfrsf23Q9ER63 176 aa13.21□□□□□ -0.29
Ckap4-202ENSMUST00000167671 Fam240aJ3QNP9 97 aa13.21□□□□□ -0.3
Ckap4-202ENSMUST00000167671 Mrps12O35680 139 aa13.21□□□□□ -0.3
Ckap4-202ENSMUST00000167671 Pcp4P63054 62 aa13.21□□□□□ -0.3
Ckap4-202ENSMUST00000167671 Sdhaf1Q3U276 118 aa13.21□□□□□ -0.3
Ckap4-202ENSMUST00000167671 Sigmar1O55242 223 aa13.2□□□□□ -0.3
Ckap4-202ENSMUST00000167671 Odf1Q61999 247 aa13.2□□□□□ -0.3
Ckap4-202ENSMUST00000167671 Uqcrfs1Q9CR68 274 aa13.2□□□□□ -0.3
Ckap4-202ENSMUST00000167671 Arl3Q9WUL7 182 aa13.2□□□□□ -0.3
Ckap4-202ENSMUST00000167671 Igkv4-57-1A0A075B5M4 119 aa13.2□□□□□ -0.3
Ckap4-202ENSMUST00000167671 Esp4A8R0T8 117 aa13.2□□□□□ -0.3
Ckap4-202ENSMUST00000167671 Tmem14cQ9CQN6 114 aa13.2□□□□□ -0.3
Ckap4-202ENSMUST00000167671 Cspg4Q8VHY0 2327 aa13.19□□□□□ -0.3
Ckap4-202ENSMUST00000167671 Ighv3-8A0A075B5T0 131 aa13.19□□□□□ -0.3
Ckap4-202ENSMUST00000167671 AamdcQ8R0P4 122 aa13.19□□□□□ -0.3
Ckap4-202ENSMUST00000167671 Ormdl2Q9CQZ0 153 aa13.19□□□□□ -0.3
Ckap4-202ENSMUST00000167671 Pradc1Q9D9N8 188 aa13.19□□□□□ -0.3
Ckap4-202ENSMUST00000167671 Col6a4A2AX52 2309 aa13.19□□□□□ -0.3
Ckap4-202ENSMUST00000167671 Socs3O35718 225 aa13.19□□□□□ -0.3
Ckap4-202ENSMUST00000167671 Vamp8O70404 101 aa13.19□□□□□ -0.3
Ckap4-202ENSMUST00000167671 TgfaP48030 159 aa13.19□□□□□ -0.3
Ckap4-202ENSMUST00000167671 Gm94Q3V2D2 93 aa13.19□□□□□ -0.3
Ckap4-202ENSMUST00000167671 Gm21370Q3T9V6 190 aa13.18□□□□□ -0.3
Ckap4-202ENSMUST00000167671 Prss29Q99MS4 279 aa13.18□□□□□ -0.3
Ckap4-202ENSMUST00000167671 Dpm3Q9D1Q4 92 aa13.18□□□□□ -0.3
Ckap4-202ENSMUST00000167671 Plac1Q9JI83 173 aa13.18□□□□□ -0.3
Ckap4-202ENSMUST00000167671 Igkv4-70A0A0B4J1I5 116 aa13.18□□□□□ -0.3
Ckap4-202ENSMUST00000167671 P01747 120 aa13.18□□□□□ -0.3
Retrieved 100 of 22,080 RNA–protein pairs in 149.4 ms