RNA–Protein interactions for RNA: ENSMUST00000136980.7

Prpf40b-208, Transcript of Pre-mRNA-processing factor 40 homolog B, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Prpf40b, Length 3,047 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40b-208ENSMUST00000136980 Higd1cQ76I25 96 aa8.89□□□□□ -0.99
Prpf40b-208ENSMUST00000136980 Tmem101Q91VP7 257 aa8.89□□□□□ -0.99
Prpf40b-208ENSMUST00000136980 Ighv2-6A0A075B6A7 116 aa8.89□□□□□ -0.99
Prpf40b-208ENSMUST00000136980 P04944 107 aa8.89□□□□□ -0.99
Prpf40b-208ENSMUST00000136980 Apoc4Q61268 124 aa8.89□□□□□ -0.99
Prpf40b-208ENSMUST00000136980 Wipf1Q8K1I7 493 aa8.89□□□□□ -0.99
Prpf40b-208ENSMUST00000136980 Rnf183Q8QZS5 190 aa8.89□□□□□ -0.99
Prpf40b-208ENSMUST00000136980 Ndufb3Q9CQZ6 104 aa8.89□□□□□ -0.99
Prpf40b-208ENSMUST00000136980 Slc25a16Q8C0K5 332 aa8.88□□□□□ -0.99
Prpf40b-208ENSMUST00000136980 Ovol1Q9WTJ2 267 aa8.88□□□□□ -0.99
Prpf40b-208ENSMUST00000136980 Muc4Q8JZM8 3443 aa8.88□□□□□ -0.99
Prpf40b-208ENSMUST00000136980 NgfP01139 241 aa8.88□□□□□ -0.99
Prpf40b-208ENSMUST00000136980 P01756 117 aa8.88□□□□□ -0.99
Prpf40b-208ENSMUST00000136980 P01757 117 aa8.88□□□□□ -0.99
Prpf40b-208ENSMUST00000136980 Atp5eP56382 52 aa8.88□□□□□ -0.99
Prpf40b-208ENSMUST00000136980 Lrcol1Q3URS3 161 aa8.88□□□□□ -0.99
Prpf40b-208ENSMUST00000136980 Tal2Q62282 108 aa8.88□□□□□ -0.99
Prpf40b-208ENSMUST00000136980 SonQ9QX47 2444 aaKnown RBP8.88□□□□□ -0.99
Prpf40b-208ENSMUST00000136980 Gm3618D3Z4P5 127 aa8.88□□□□□ -0.99
Prpf40b-208ENSMUST00000136980 Tmem95P0DJF3 176 aa8.88□□□□□ -0.99
Prpf40b-208ENSMUST00000136980 MdfiP70331 251 aa8.88□□□□□ -0.99
Prpf40b-208ENSMUST00000136980 Gm20481G3UXK4 153 aa8.87□□□□□ -0.99
Prpf40b-208ENSMUST00000136980 Sub1P11031 127 aaKnown RBP8.87□□□□□ -0.99
Prpf40b-208ENSMUST00000136980 Defa1P11477 93 aa8.87□□□□□ -0.99
Prpf40b-208ENSMUST00000136980 Rnf185Q91YT2 192 aa8.87□□□□□ -0.99
Prpf40b-208ENSMUST00000136980 Vsig4F6TUL9 280 aa8.87□□□□□ -0.99
Prpf40b-208ENSMUST00000136980 Map6d1Q14BB9 191 aa8.87□□□□□ -0.99
Prpf40b-208ENSMUST00000136980 OtosQ8R448 89 aa8.87□□□□□ -0.99
Prpf40b-208ENSMUST00000136980 Mrpl33Q9CQP0 65 aa8.87□□□□□ -0.99
Prpf40b-208ENSMUST00000136980 Plekhb2Q9QZC7 221 aa8.87□□□□□ -0.99
Prpf40b-208ENSMUST00000136980 Sptan1P16546 2472 aaKnown RBP8.87□□□□□ -0.99
Prpf40b-208ENSMUST00000136980 Rpl13aP19253 203 aaKnown RBP8.86□□□□□ -0.99
Prpf40b-208ENSMUST00000136980 Znf239P24399 201 aa8.86□□□□□ -0.99
Prpf40b-208ENSMUST00000136980 Znf575Q3TXZ1 239 aa8.86□□□□□ -0.99
Prpf40b-208ENSMUST00000136980 Gm12888Q3UW77 119 aa8.86□□□□□ -0.99
Prpf40b-208ENSMUST00000136980 Trav7-2Q5R1I3 112 aa8.86□□□□□ -0.99
Prpf40b-208ENSMUST00000136980 MycbQ6P8Z1 170 aa8.86□□□□□ -0.99
Prpf40b-208ENSMUST00000136980 Q8R092 253 aa8.86□□□□□ -0.99
Prpf40b-208ENSMUST00000136980 HilpdaQ9JLS0 64 aa8.86□□□□□ -0.99
Prpf40b-208ENSMUST00000136980 Ighv1-55A0A075B5W6 117 aa8.86□□□□□ -0.99
Prpf40b-208ENSMUST00000136980 Trav14-2A0A075B694 121 aa8.86□□□□□ -0.99
Prpf40b-208ENSMUST00000136980 Ighv1-20A0A0A6YX66 117 aa8.86□□□□□ -0.99
Prpf40b-208ENSMUST00000136980 Rnf5O35445 180 aa8.86□□□□□ -0.99
Prpf40b-208ENSMUST00000136980 BaalcQ8VHV1 145 aa8.86□□□□□ -0.99
Prpf40b-208ENSMUST00000136980 3100002H09RikQ9CXW6 140 aa8.86□□□□□ -0.99
Prpf40b-208ENSMUST00000136980 Ighv1-37A0A0A6YW32 117 aa8.85□□□□□ -0.99
Prpf40b-208ENSMUST00000136980 Nxph4G3X9N5 304 aa8.85□□□□□ -0.99
Prpf40b-208ENSMUST00000136980 Tcl1b4P56844 120 aa8.85□□□□□ -0.99
Prpf40b-208ENSMUST00000136980 Ptprz1B9EKR1 2312 aa8.85□□□□□ -0.99
Prpf40b-208ENSMUST00000136980 CntfrO88507 372 aa8.85□□□□□ -0.99
Prpf40b-208ENSMUST00000136980 PolP10400 120 aa8.85□□□□□ -0.99
Prpf40b-208ENSMUST00000136980 P18532 116 aa8.85□□□□□ -0.99
Prpf40b-208ENSMUST00000136980 NdpP48744 131 aa8.85□□□□□ -0.99
Prpf40b-208ENSMUST00000136980 Defa16P50714 93 aa8.85□□□□□ -0.99
Prpf40b-208ENSMUST00000136980 Gm5464Q3UY29 175 aa8.85□□□□□ -0.99
Prpf40b-208ENSMUST00000136980 AamdcQ8R0P4 122 aa8.85□□□□□ -0.99
Prpf40b-208ENSMUST00000136980 Ighv14-1A0A075B5R4 117 aa8.84□□□□□ -0.99
Prpf40b-208ENSMUST00000136980 Pradc1Q9D9N8 188 aa8.84□□□□□ -0.99
Prpf40b-208ENSMUST00000136980 Dpm2Q9Z324 84 aa8.84□□□□□ -0.99
Prpf40b-208ENSMUST00000136980 Ighv5-6A0A075B5Q0 117 aa8.83□□□□□ -1
Prpf40b-208ENSMUST00000136980 Gm45717A0A1B0GT68 152 aa8.83□□□□□ -1
Prpf40b-208ENSMUST00000136980 Samd13D3YUG0 102 aa8.83□□□□□ -1
Prpf40b-208ENSMUST00000136980 ScxQ64124 207 aa8.83□□□□□ -1
Prpf40b-208ENSMUST00000136980 Pygo1Q9D0P5 417 aa8.83□□□□□ -1
Prpf40b-208ENSMUST00000136980 Rpl35aO55142 110 aa8.83□□□□□ -1
Prpf40b-208ENSMUST00000136980 Ntn5Q3UQ22 452 aa8.83□□□□□ -1
Prpf40b-208ENSMUST00000136980 Fam216bQ8CC14 138 aa8.83□□□□□ -1
Prpf40b-208ENSMUST00000136980 Fam24aQ8CF27 98 aa8.83□□□□□ -1
Prpf40b-208ENSMUST00000136980 Gpx7Q99LJ6 186 aa8.83□□□□□ -1
Prpf40b-208ENSMUST00000136980 Prss29Q99MS4 279 aa8.83□□□□□ -1
Prpf40b-208ENSMUST00000136980 Gm10036E9PYL9 178 aaKnown RBP8.83□□□□□ -1
Prpf40b-208ENSMUST00000136980 BokO35425 213 aa8.83□□□□□ -1
Prpf40b-208ENSMUST00000136980 OtorQ9JIE3 128 aa8.83□□□□□ -1
Prpf40b-208ENSMUST00000136980 Col6a4A2AX52 2309 aa8.82□□□□□ -1
Prpf40b-208ENSMUST00000136980 Abca4O35600 2310 aa8.82□□□□□ -1
Prpf40b-208ENSMUST00000136980 Psmb8P28063 276 aa8.82□□□□□ -1
Prpf40b-208ENSMUST00000136980 Snrnp40Q6PE01 358 aa8.82□□□□□ -1
Prpf40b-208ENSMUST00000136980 Fbxl15Q91W61 300 aa8.82□□□□□ -1
Prpf40b-208ENSMUST00000136980 Ighv1-81A0A075B5Y4 117 aa8.82□□□□□ -1
Prpf40b-208ENSMUST00000136980 Lypd8Q9D7S0 255 aa8.82□□□□□ -1
Prpf40b-208ENSMUST00000136980 Igkv4-81A0A0G2JEY5 119 aa8.81□□□□□ -1
Prpf40b-208ENSMUST00000136980 Gm15217A2CG07 155 aa8.81□□□□□ -1
Prpf40b-208ENSMUST00000136980 Ovol3D3YYM0 189 aa8.81□□□□□ -1
Prpf40b-208ENSMUST00000136980 P06330 118 aa8.81□□□□□ -1
Prpf40b-208ENSMUST00000136980 Trav21-dv12A0A075B6C4 109 aa8.81□□□□□ -1
Prpf40b-208ENSMUST00000136980 1520401A03RikA0A0J9YVH6 598 aa8.81□□□□□ -1
Prpf40b-208ENSMUST00000136980 Cdkn1aP39689 159 aa8.81□□□□□ -1
Prpf40b-208ENSMUST00000136980 Gatd1Q8BFQ8 220 aa8.81□□□□□ -1
Prpf40b-208ENSMUST00000136980 Gm16223Q8CBM3 117 aa8.81□□□□□ -1
Prpf40b-208ENSMUST00000136980 Mettl26Q9DCS2 204 aa8.81□□□□□ -1
Prpf40b-208ENSMUST00000136980 Gm5878E9PUB3 99 aa8.8□□□□□ -1
Prpf40b-208ENSMUST00000136980 Gm28374F6SG70 93 aa8.8□□□□□ -1
Prpf40b-208ENSMUST00000136980 P18527 97 aa8.8□□□□□ -1
Prpf40b-208ENSMUST00000136980 Q9CQM1 111 aa8.8□□□□□ -1
Prpf40b-208ENSMUST00000136980 Ighv14-2A0A075B5R7 117 aa8.8□□□□□ -1
Prpf40b-208ENSMUST00000136980 Hbb-bsA8DUK4 147 aa8.8□□□□□ -1
Prpf40b-208ENSMUST00000136980 Hbb-b1P02088 147 aa8.8□□□□□ -1
Prpf40b-208ENSMUST00000136980 Fmc1Q9CR13 113 aa8.8□□□□□ -1
Prpf40b-208ENSMUST00000136980 Gtsf1lQ9CWD0 151 aa8.8□□□□□ -1
Prpf40b-208ENSMUST00000136980 Mrpl55Q9CZ83 127 aa8.8□□□□□ -1
Retrieved 100 of 22,080 RNA–protein pairs in 40 ms