RNA–Protein interactions for RNA: ENSMUST00000136980.7

Prpf40b-208, Transcript of Pre-mRNA-processing factor 40 homolog B, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Prpf40b, Length 3,047 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40b-208ENSMUST00000136980 NischQ80TM9 1593 aa20.35■□□□□ 0.85
Prpf40b-208ENSMUST00000136980 Gm35339A0A140LHH9 1649 aa20.33■□□□□ 0.84
Prpf40b-208ENSMUST00000136980 Rhox8Q6VSS7 320 aa19.93■□□□□ 0.78
Prpf40b-208ENSMUST00000136980 Abcc9P70170 1546 aa19.65■□□□□ 0.74
Prpf40b-208ENSMUST00000136980 Abcc8B2RUS7 1588 aa19.38■□□□□ 0.69
Prpf40b-208ENSMUST00000136980 Rtl1Q7M732 1744 aa19.16■□□□□ 0.66
Prpf40b-208ENSMUST00000136980 Rpgrip1Q9EPQ2 1331 aa19.16■□□□□ 0.66
Prpf40b-208ENSMUST00000136980 Ehmt2Q9Z148 1263 aaKnown RBP19.13■□□□□ 0.65
Prpf40b-208ENSMUST00000136980 Ccdc180J3QNE4 1664 aa19.12■□□□□ 0.65
Prpf40b-208ENSMUST00000136980 Acin1Q9JIX8 1338 aaKnown RBP18.89■□□□□ 0.61
Prpf40b-208ENSMUST00000136980 Zcchc6Q5BLK4 1491 aaKnown RBP18.66■□□□□ 0.58
Prpf40b-208ENSMUST00000136980 Pcgf6Q99NA9 353 aa18.59■□□□□ 0.57
Prpf40b-208ENSMUST00000136980 Ccdc136Q3TVA9 1136 aa18.49■□□□□ 0.55
Prpf40b-208ENSMUST00000136980 ScribQ80U72 1612 aa18.48■□□□□ 0.55
Prpf40b-208ENSMUST00000136980 HrcG5E8J6 738 aa18.33■□□□□ 0.53
Prpf40b-208ENSMUST00000136980 DiexfQ8BTT6 772 aaKnown RBP18.29■□□□□ 0.52
Prpf40b-208ENSMUST00000136980 Dcaf1Q80TR8 1506 aa18.27■□□□□ 0.51
Prpf40b-208ENSMUST00000136980 Supt5hO55201 1082 aaKnown RBP18.22■□□□□ 0.51
Prpf40b-208ENSMUST00000136980 Trim41Q5NCC3 630 aa18.14■□□□□ 0.49
Prpf40b-208ENSMUST00000136980 Las1lA2BE28 776 aaKnown RBP18.01■□□□□ 0.47
Prpf40b-208ENSMUST00000136980 Myt1Q8CFC2 1127 aa17.99■□□□□ 0.47
Prpf40b-208ENSMUST00000136980 Neurod1Q60867 357 aa17.95■□□□□ 0.46
Prpf40b-208ENSMUST00000136980 CenpbP27790 599 aa17.93■□□□□ 0.46
Prpf40b-208ENSMUST00000136980 Kdm5dQ62240 1548 aa17.91■□□□□ 0.46
Prpf40b-208ENSMUST00000136980 Zeb1Q64318 1117 aa17.9■□□□□ 0.46
Prpf40b-208ENSMUST00000136980 Rb1cc1Q9ESK9 1588 aa17.87■□□□□ 0.45
Prpf40b-208ENSMUST00000136980 NacadQ5SWP3 1504 aa17.85■□□□□ 0.45
Prpf40b-208ENSMUST00000136980 Gab3Q8BSM5 595 aa17.75■□□□□ 0.43
Prpf40b-208ENSMUST00000136980 Bcl11aQ9QYE3 773 aa17.69■□□□□ 0.42
Prpf40b-208ENSMUST00000136980 Cngb1E1AZ71 1325 aa17.65■□□□□ 0.42
Prpf40b-208ENSMUST00000136980 1700123L14RikQ3V2K7 440 aa17.64■□□□□ 0.41
Prpf40b-208ENSMUST00000136980 Amer1Q7TS75 1132 aa17.64■□□□□ 0.41
Prpf40b-208ENSMUST00000136980 Cep164Q5DU05 1446 aa17.63■□□□□ 0.41
Prpf40b-208ENSMUST00000136980 Sall2Q9QX96 1004 aa17.58■□□□□ 0.41
Prpf40b-208ENSMUST00000136980 Chic1Q8CBW7 227 aa17.58■□□□□ 0.4
Prpf40b-208ENSMUST00000136980 Baz1aO88379 1555 aa17.58■□□□□ 0.4
Prpf40b-208ENSMUST00000136980 Mier1Q5UAK0 511 aa17.56■□□□□ 0.4
Prpf40b-208ENSMUST00000136980 Sycp2Q9CUU3 1500 aa17.5■□□□□ 0.39
Prpf40b-208ENSMUST00000136980 NefmP08553 848 aa17.42■□□□□ 0.38
Prpf40b-208ENSMUST00000136980 Csrnp3P59055 597 aa17.41■□□□□ 0.38
Prpf40b-208ENSMUST00000136980 Rsf1E9PWW9 1441 aaKnown RBP17.4■□□□□ 0.38
Prpf40b-208ENSMUST00000136980 Ppargc1bQ8VHJ7 1014 aa17.38■□□□□ 0.37
Prpf40b-208ENSMUST00000136980 PrkcshO08795 521 aa17.37■□□□□ 0.37
Prpf40b-208ENSMUST00000136980 Wdr66E9Q743 1299 aa17.32■□□□□ 0.36
Prpf40b-208ENSMUST00000136980 Aebp2Q9Z248 504 aaKnown RBP17.27■□□□□ 0.36
Prpf40b-208ENSMUST00000136980 Crybg2B7ZCC2 1516 aa17.25■□□□□ 0.35
Prpf40b-208ENSMUST00000136980 Anks4bQ8K3X6 423 aa17.25■□□□□ 0.35
Prpf40b-208ENSMUST00000136980 BicraF8VPZ9 1578 aa17.24■□□□□ 0.35
Prpf40b-208ENSMUST00000136980 UbtfP25976 765 aaKnown RBP17.24■□□□□ 0.35
Prpf40b-208ENSMUST00000136980 Ccdc88bQ4QRL3 1481 aa17.23■□□□□ 0.35
Prpf40b-208ENSMUST00000136980 Smarca2Q6DIC0 1577 aa17.21■□□□□ 0.35
Prpf40b-208ENSMUST00000136980 Gm38655A0A286YDK6 273 aa17.17■□□□□ 0.34
Prpf40b-208ENSMUST00000136980 Aplp2Q06335 707 aa17.1■□□□□ 0.33
Prpf40b-208ENSMUST00000136980 Cdk11bP24788 784 aaKnown RBP17.07■□□□□ 0.32
Prpf40b-208ENSMUST00000136980 Nop58Q6DFW4 536 aaKnown RBP17.07■□□□□ 0.32
Prpf40b-208ENSMUST00000136980 Esf1Q3V1V3 845 aaKnown RBP17.03■□□□□ 0.32
Prpf40b-208ENSMUST00000136980 Cecr2E9Q2Z1 1453 aa16.96■□□□□ 0.3
Prpf40b-208ENSMUST00000136980 Golga3P55937 1487 aa16.96■□□□□ 0.3
Prpf40b-208ENSMUST00000136980 ClspnQ80YR7 1315 aa16.95■□□□□ 0.3
Prpf40b-208ENSMUST00000136980 Myt1lP97500 1187 aa16.94■□□□□ 0.3
Prpf40b-208ENSMUST00000136980 Brd4Q9ESU6 1400 aaKnown RBP16.93■□□□□ 0.3
Prpf40b-208ENSMUST00000136980 Plppr3Q7TPB0 716 aa16.85■□□□□ 0.29
Prpf40b-208ENSMUST00000136980 TonslQ6NZL6 1363 aa16.81■□□□□ 0.28
Prpf40b-208ENSMUST00000136980 Synj1Q8CHC4 1574 aa16.81■□□□□ 0.28
Prpf40b-208ENSMUST00000136980 Ifnlr1Q8CGK5 535 aa16.76■□□□□ 0.27
Prpf40b-208ENSMUST00000136980 Plekhg3Q4VAC9 1341 aa16.75■□□□□ 0.27
Prpf40b-208ENSMUST00000136980 SafbD3YXK2 937 aaKnown RBP16.68■□□□□ 0.26
Prpf40b-208ENSMUST00000136980 Mapk8ip2Q9ERE9 830 aa16.68■□□□□ 0.26
Prpf40b-208ENSMUST00000136980 Eid3Q3V124 375 aa16.66■□□□□ 0.26
Prpf40b-208ENSMUST00000136980 Npm2Q80W85 207 aa16.64■□□□□ 0.26
Prpf40b-208ENSMUST00000136980 Ap3b1Q9Z1T1 1105 aa16.64■□□□□ 0.26
Prpf40b-208ENSMUST00000136980 Ttbk1Q6PCN3 1308 aa16.63■□□□□ 0.25
Prpf40b-208ENSMUST00000136980 Hnrnpul2Q00PI9 745 aaKnown RBP16.63■□□□□ 0.25
Prpf40b-208ENSMUST00000136980 CftrP26361 1476 aa16.61■□□□□ 0.25
Prpf40b-208ENSMUST00000136980 Fam71e1A1L3C1 212 aa16.6■□□□□ 0.25
Prpf40b-208ENSMUST00000136980 Rapgef2Q8CHG7 1496 aa16.59■□□□□ 0.25
Prpf40b-208ENSMUST00000136980 Smarca4Q3TKT4 1613 aaKnown RBP16.59■□□□□ 0.25
Prpf40b-208ENSMUST00000136980 Cc2d2aQ8CFW7 1633 aa16.57■□□□□ 0.24
Prpf40b-208ENSMUST00000136980 CatipB9EKE5 520 aa16.55■□□□□ 0.24
Prpf40b-208ENSMUST00000136980 Cep162Q6ZQ06 1403 aa16.55■□□□□ 0.24
Prpf40b-208ENSMUST00000136980 Top2bQ64511 1612 aa16.54■□□□□ 0.24
Prpf40b-208ENSMUST00000136980 Clip1Q922J3 1391 aa16.52■□□□□ 0.24
Prpf40b-208ENSMUST00000136980 Pds5bQ4VA53 1446 aaKnown RBP16.52■□□□□ 0.24
Prpf40b-208ENSMUST00000136980 Pknox2Q8BG99 474 aa16.52■□□□□ 0.23
Prpf40b-208ENSMUST00000136980 Atad2bE9Q166 1460 aaKnown RBP16.5■□□□□ 0.23
Prpf40b-208ENSMUST00000136980 Iqgap2Q3UQ44 1575 aa16.44■□□□□ 0.22
Prpf40b-208ENSMUST00000136980 Ncapd3Q6ZQK0 1506 aa16.39■□□□□ 0.21
Prpf40b-208ENSMUST00000136980 Cttnbp2B9EJA2 1648 aa16.39■□□□□ 0.21
Prpf40b-208ENSMUST00000136980 Top2aQ01320 1528 aaKnown RBP16.35■□□□□ 0.21
Prpf40b-208ENSMUST00000136980 Fmn1Q05860 1466 aa16.34■□□□□ 0.21
Prpf40b-208ENSMUST00000136980 Hdac5Q9Z2V6 1113 aa16.32■□□□□ 0.2
Prpf40b-208ENSMUST00000136980 Thoc2B1AZI6 1594 aaKnown RBP16.32■□□□□ 0.2
Prpf40b-208ENSMUST00000136980 Tnnt3Q9QZ47 272 aa16.31■□□□□ 0.2
Prpf40b-208ENSMUST00000136980 Fgd1P52734 960 aa16.29■□□□□ 0.2
Prpf40b-208ENSMUST00000136980 NclP09405 707 aaKnown RBP16.24■□□□□ 0.19
Prpf40b-208ENSMUST00000136980 Il27Q8K3I6 234 aa16.23■□□□□ 0.19
Prpf40b-208ENSMUST00000136980 Wdr62Q3U3T8 1523 aa16.22■□□□□ 0.19
Prpf40b-208ENSMUST00000136980 Slc24a1Q91WD8 1130 aa16.22■□□□□ 0.19
Prpf40b-208ENSMUST00000136980 NrdcQ8BHG1 1161 aa16.21■□□□□ 0.19
Prpf40b-208ENSMUST00000136980 Znf710Q3U288 666 aa16.21■□□□□ 0.19
Retrieved 100 of 22,080 RNA–protein pairs in 29.3 ms