RNA–Protein interactions for RNA: ENSMUST00000118287.8

Prpf40b-202, Transcript of Pre-mRNA-processing factor 40 homolog B, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Prpf40b, Length 3,129 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40b-202ENSMUST00000118287 Gm9958Q8C9U4 106 aa8.4□□□□□ -1.07
Prpf40b-202ENSMUST00000118287 Ighv14-3A0A075B5R9 117 aa8.39□□□□□ -1.07
Prpf40b-202ENSMUST00000118287 A730015C16RikQ8C992 119 aa8.39□□□□□ -1.07
Prpf40b-202ENSMUST00000118287 Q9D131 166 aa8.39□□□□□ -1.07
Prpf40b-202ENSMUST00000118287 Vmn1r63Q9EPT1 300 aa8.39□□□□□ -1.07
Prpf40b-202ENSMUST00000118287 CtrlQ9ER05 264 aa8.39□□□□□ -1.07
Prpf40b-202ENSMUST00000118287 Dpm2Q9Z324 84 aa8.39□□□□□ -1.07
Prpf40b-202ENSMUST00000118287 Itpr3P70227 2670 aa8.39□□□□□ -1.07
Prpf40b-202ENSMUST00000118287 Shisal2aA2A9G7 189 aa8.39□□□□□ -1.07
Prpf40b-202ENSMUST00000118287 Tcrg-C3L7N479 172 aa8.39□□□□□ -1.07
Prpf40b-202ENSMUST00000118287 P01811 117 aa8.39□□□□□ -1.07
Prpf40b-202ENSMUST00000118287 P03985 172 aa8.39□□□□□ -1.07
Prpf40b-202ENSMUST00000118287 Gm10192Q3V0S1 108 aa8.39□□□□□ -1.07
Prpf40b-202ENSMUST00000118287 Rbfox3Q8BIF2 374 aa8.39□□□□□ -1.07
Prpf40b-202ENSMUST00000118287 Taf15Q8BQ46 557 aaKnown RBP8.39□□□□□ -1.07
Prpf40b-202ENSMUST00000118287 Wisp2Q9Z0G4 251 aa8.39□□□□□ -1.07
Prpf40b-202ENSMUST00000118287 Trav16nA0A075B634 117 aa8.38□□□□□ -1.07
Prpf40b-202ENSMUST00000118287 F11rO88792 300 aa8.38□□□□□ -1.07
Prpf40b-202ENSMUST00000118287 Sub1P11031 127 aaKnown RBP8.38□□□□□ -1.07
Prpf40b-202ENSMUST00000118287 Chchd5Q9CQP3 110 aa8.38□□□□□ -1.07
Prpf40b-202ENSMUST00000118287 Ovol1Q9WTJ2 267 aa8.38□□□□□ -1.07
Prpf40b-202ENSMUST00000118287 Gm17660B9UIU9 90 aa8.38□□□□□ -1.07
Prpf40b-202ENSMUST00000118287 Gm20726G3UX18 150 aa8.38□□□□□ -1.07
Prpf40b-202ENSMUST00000118287 Cfc1P97766 202 aa8.38□□□□□ -1.07
Prpf40b-202ENSMUST00000118287 D630044L22RikQ8C701 164 aa8.38□□□□□ -1.07
Prpf40b-202ENSMUST00000118287 Gm26566Q8CAC1 153 aa8.38□□□□□ -1.07
Prpf40b-202ENSMUST00000118287 Ighv1-69A0A0G2JFS5 117 aa8.38□□□□□ -1.07
Prpf40b-202ENSMUST00000118287 Mrps21P58059 87 aa8.38□□□□□ -1.07
Prpf40b-202ENSMUST00000118287 Gm6040Q4QY32 63 aa8.38□□□□□ -1.07
Prpf40b-202ENSMUST00000118287 Higd1cQ76I25 96 aa8.38□□□□□ -1.07
Prpf40b-202ENSMUST00000118287 QrfpQ8CE23 124 aa8.38□□□□□ -1.07
Prpf40b-202ENSMUST00000118287 Lypd8Q9D7S0 255 aa8.38□□□□□ -1.07
Prpf40b-202ENSMUST00000118287 Trdv1A0A075B657 112 aa8.37□□□□□ -1.07
Prpf40b-202ENSMUST00000118287 Gm4064A0A087WR82 380 aa8.37□□□□□ -1.07
Prpf40b-202ENSMUST00000118287 Gm6812B1AXU1 112 aa8.37□□□□□ -1.07
Prpf40b-202ENSMUST00000118287 Gm10352B2RWR6 380 aa8.37□□□□□ -1.07
Prpf40b-202ENSMUST00000118287 Ovol3D3YYM0 189 aa8.37□□□□□ -1.07
Prpf40b-202ENSMUST00000118287 Gm10337F7DEP7 55 aa8.37□□□□□ -1.07
Prpf40b-202ENSMUST00000118287 Gm21693J3QK27 380 aa8.37□□□□□ -1.07
Prpf40b-202ENSMUST00000118287 1700020N15RikL7MTX3 112 aa8.37□□□□□ -1.07
Prpf40b-202ENSMUST00000118287 Gm26661M0QWV4 156 aa8.37□□□□□ -1.07
Prpf40b-202ENSMUST00000118287 Rbmy1a1O35698 380 aa8.37□□□□□ -1.07
Prpf40b-202ENSMUST00000118287 GlrxQ9QUH0 107 aa8.37□□□□□ -1.07
Prpf40b-202ENSMUST00000118287 Omt2bD3YX29 119 aa8.37□□□□□ -1.07
Prpf40b-202ENSMUST00000118287 E030018B13RikJ3QMS9 113 aa8.37□□□□□ -1.07
Prpf40b-202ENSMUST00000118287 CrygeQ03740 174 aa8.37□□□□□ -1.07
Prpf40b-202ENSMUST00000118287 Rasl10aQ8K5A4 203 aa8.37□□□□□ -1.07
Prpf40b-202ENSMUST00000118287 RpeQ8VEE0 228 aa8.37□□□□□ -1.07
Prpf40b-202ENSMUST00000118287 Rasl11bQ922H7 247 aa8.37□□□□□ -1.07
Prpf40b-202ENSMUST00000118287 Ndufb3Q9CQZ6 104 aa8.37□□□□□ -1.07
Prpf40b-202ENSMUST00000118287 Timm23Q9WTQ8 209 aa8.37□□□□□ -1.07
Prpf40b-202ENSMUST00000118287 Csmd2V9GX34 3611 aa8.37□□□□□ -1.07
Prpf40b-202ENSMUST00000118287 Trav16d-dv11A0A075B617 117 aa8.36□□□□□ -1.07
Prpf40b-202ENSMUST00000118287 P04944 107 aa8.36□□□□□ -1.07
Prpf40b-202ENSMUST00000118287 Fam216bQ8CC14 138 aa8.36□□□□□ -1.07
Prpf40b-202ENSMUST00000118287 Hcfc1Q61191 2045 aaKnown RBP8.36□□□□□ -1.07
Prpf40b-202ENSMUST00000118287 AcanQ61282 2132 aaKnown RBP8.36□□□□□ -1.07
Prpf40b-202ENSMUST00000118287 8030423J24RikQ9CX45 142 aa8.36□□□□□ -1.07
Prpf40b-202ENSMUST00000118287 Col6a4A2AX52 2309 aa8.36□□□□□ -1.07
Prpf40b-202ENSMUST00000118287 9230102O04RikA2ASX7 82 aa8.36□□□□□ -1.07
Prpf40b-202ENSMUST00000118287 PspnO70300 156 aa8.36□□□□□ -1.07
Prpf40b-202ENSMUST00000118287 Prok1Q14A28 105 aa8.36□□□□□ -1.07
Prpf40b-202ENSMUST00000118287 Olfr1209Q3SXJ3 310 aa8.36□□□□□ -1.07
Prpf40b-202ENSMUST00000118287 Apoc4Q61268 124 aa8.36□□□□□ -1.07
Prpf40b-202ENSMUST00000118287 PemtQ61907 199 aa8.36□□□□□ -1.07
Prpf40b-202ENSMUST00000118287 Olfr904Q7TRC9 310 aa8.36□□□□□ -1.07
Prpf40b-202ENSMUST00000118287 Ucn2Q99ML8 113 aa8.36□□□□□ -1.07
Prpf40b-202ENSMUST00000118287 Dusp14Q9JLY7 198 aa8.36□□□□□ -1.07
Prpf40b-202ENSMUST00000118287 GaptQ8CB93 157 aa8.35□□□□□ -1.07
Prpf40b-202ENSMUST00000118287 Ndufc2Q9CQ54 120 aa8.35□□□□□ -1.07
Prpf40b-202ENSMUST00000118287 Mrpl33Q9CQP0 65 aa8.35□□□□□ -1.07
Prpf40b-202ENSMUST00000118287 CklfQ9DAS1 152 aa8.35□□□□□ -1.07
Prpf40b-202ENSMUST00000118287 Plekhb2Q9QZC7 221 aa8.35□□□□□ -1.07
Prpf40b-202ENSMUST00000118287 Gpx1P11352 201 aa8.35□□□□□ -1.07
Prpf40b-202ENSMUST00000118287 ScxQ64124 207 aa8.35□□□□□ -1.07
Prpf40b-202ENSMUST00000118287 9230109A22RikQ8BHE6 111 aa8.35□□□□□ -1.07
Prpf40b-202ENSMUST00000118287 Ttc28Q80XJ3 2450 aa8.35□□□□□ -1.07
Prpf40b-202ENSMUST00000118287 Ighv2-6A0A075B6A7 116 aa8.34□□□□□ -1.07
Prpf40b-202ENSMUST00000118287 Vamp8O70404 101 aa8.34□□□□□ -1.07
Prpf40b-202ENSMUST00000118287 P01794 123 aa8.34□□□□□ -1.07
Prpf40b-202ENSMUST00000118287 Defa1P11477 93 aa8.34□□□□□ -1.07
Prpf40b-202ENSMUST00000118287 LoxP28301 411 aa8.34□□□□□ -1.07
Prpf40b-202ENSMUST00000118287 Lrcol1Q3URS3 161 aa8.34□□□□□ -1.07
Prpf40b-202ENSMUST00000118287 Ighv14-2A0A075B5R7 117 aa8.34□□□□□ -1.07
Prpf40b-202ENSMUST00000118287 Gm20481G3UXK4 153 aa8.34□□□□□ -1.07
Prpf40b-202ENSMUST00000118287 Esp3J3QN49 87 aa8.34□□□□□ -1.07
Prpf40b-202ENSMUST00000118287 P01843 105 aa8.34□□□□□ -1.07
Prpf40b-202ENSMUST00000118287 Prrc2aQ7TSC1 2158 aaKnown RBP8.34□□□□□ -1.08
Prpf40b-202ENSMUST00000118287 Ighv5-6A0A075B5Q0 117 aa8.33□□□□□ -1.08
Prpf40b-202ENSMUST00000118287 P01724 129 aa8.33□□□□□ -1.08
Prpf40b-202ENSMUST00000118287 Fgf6P21658 208 aa8.33□□□□□ -1.08
Prpf40b-202ENSMUST00000118287 Defa16P50714 93 aa8.33□□□□□ -1.08
Prpf40b-202ENSMUST00000118287 MycbQ6P8Z1 170 aa8.33□□□□□ -1.08
Prpf40b-202ENSMUST00000118287 Gm5105Q8C6Y9 112 aa8.33□□□□□ -1.08
Prpf40b-202ENSMUST00000118287 Pygo1Q9D0P5 417 aa8.33□□□□□ -1.08
Prpf40b-202ENSMUST00000118287 Abca12E9Q876 2595 aa8.33□□□□□ -1.08
Prpf40b-202ENSMUST00000118287 Nbeal1E9PYP2 2688 aa8.33□□□□□ -1.08
Prpf40b-202ENSMUST00000118287 Sdk1Q3UH53 2193 aa8.33□□□□□ -1.08
Prpf40b-202ENSMUST00000118287 Ighv1-81A0A075B5Y4 117 aa8.33□□□□□ -1.08
Prpf40b-202ENSMUST00000118287 Trav8-1A0A075B641 109 aa8.33□□□□□ -1.08
Retrieved 100 of 22,080 RNA–protein pairs in 51 ms