RNA–Protein interactions for RNA: ENSMUST00000100063.8

Scn9a-201, Transcript of Sodium channel protein type 9 subunit alpha, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Scn9a, Length 9,813 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9a-201ENSMUST00000100063 Nav3Q80TN7 2359 aa8.3□□□□□ -1.08
Scn9a-201ENSMUST00000100063 Gm33815A0A087WNV3 176 aa8.3□□□□□ -1.08
Scn9a-201ENSMUST00000100063 Gm21616B6ZB74 166 aa8.3□□□□□ -1.08
Scn9a-201ENSMUST00000100063 Ifitm5O88728 134 aa8.3□□□□□ -1.08
Scn9a-201ENSMUST00000100063 Tm4sf20Q9CQY8 226 aa8.3□□□□□ -1.08
Scn9a-201ENSMUST00000100063 Igkv3-4A0A140T8Q4 119 aa8.3□□□□□ -1.08
Scn9a-201ENSMUST00000100063 Gm5941Q497P9 117 aa8.3□□□□□ -1.08
Scn9a-201ENSMUST00000100063 8030423J24RikQ9CX45 142 aa8.3□□□□□ -1.08
Scn9a-201ENSMUST00000100063 Igkv9-123A0A140T8N8 117 aa8.3□□□□□ -1.08
Scn9a-201ENSMUST00000100063 Mtatp8P03930 67 aa8.3□□□□□ -1.08
Scn9a-201ENSMUST00000100063 Cox7b2Q9D2H1 82 aa8.29□□□□□ -1.08
Scn9a-201ENSMUST00000100063 Q9D8L0 127 aa8.29□□□□□ -1.08
Scn9a-201ENSMUST00000100063 PigyP0C1P0 71 aa8.29□□□□□ -1.08
Scn9a-201ENSMUST00000100063 Ighv1-64A0A075B5X3 117 aa8.29□□□□□ -1.08
Scn9a-201ENSMUST00000100063 Zfp951A0A087WRH0 451 aa8.29□□□□□ -1.08
Scn9a-201ENSMUST00000100063 6430628N08RikA0A0U1RQ45 177 aa8.29□□□□□ -1.08
Scn9a-201ENSMUST00000100063 Tanc2A2A690 1994 aa8.29□□□□□ -1.08
Scn9a-201ENSMUST00000100063 OtoglF7A4A7 2325 aa8.29□□□□□ -1.08
Scn9a-201ENSMUST00000100063 Cox17P56394 63 aa8.29□□□□□ -1.08
Scn9a-201ENSMUST00000100063 Zfp36l1P23950 338 aa8.29□□□□□ -1.08
Scn9a-201ENSMUST00000100063 Tdgf1P51865 171 aa8.29□□□□□ -1.08
Scn9a-201ENSMUST00000100063 Znrd1Q791N7 123 aa8.29□□□□□ -1.08
Scn9a-201ENSMUST00000100063 Tcrg-V5A0A0G2JGV5 113 aa8.28□□□□□ -1.08
Scn9a-201ENSMUST00000100063 Gm6040Q4QY32 63 aa8.28□□□□□ -1.08
Scn9a-201ENSMUST00000100063 Bud31Q6PGH1 103 aa8.28□□□□□ -1.08
Scn9a-201ENSMUST00000100063 Ighv1-74A0A0G2JGK2 117 aa8.28□□□□□ -1.08
Scn9a-201ENSMUST00000100063 Gm20499D3Z4G5 72 aa8.28□□□□□ -1.08
Scn9a-201ENSMUST00000100063 Prop1P97458 223 aa8.28□□□□□ -1.08
Scn9a-201ENSMUST00000100063 Trav6-6A0A075B603 114 aa8.28□□□□□ -1.08
Scn9a-201ENSMUST00000100063 Reg3bP35230 175 aa8.28□□□□□ -1.08
Scn9a-201ENSMUST00000100063 Trav14-2A0A075B694 121 aa8.28□□□□□ -1.08
Scn9a-201ENSMUST00000100063 Atp6v0e2Q91XE7 81 aa8.28□□□□□ -1.08
Scn9a-201ENSMUST00000100063 Trav14-3A0A075B607 120 aa8.28□□□□□ -1.08
Scn9a-201ENSMUST00000100063 Plpp2Q9DAX2 276 aa8.27□□□□□ -1.08
Scn9a-201ENSMUST00000100063 Cox8bP48772 70 aa8.27□□□□□ -1.09
Scn9a-201ENSMUST00000100063 Foxi1Q922I5 372 aa8.27□□□□□ -1.09
Scn9a-201ENSMUST00000100063 Dmrtc1c1Q9D410 238 aa8.27□□□□□ -1.09
Scn9a-201ENSMUST00000100063 Ighv6-7A0A0A6YWU3 119 aa8.27□□□□□ -1.09
Scn9a-201ENSMUST00000100063 GhrhP16043 103 aa8.27□□□□□ -1.09
Scn9a-201ENSMUST00000100063 Fam216bQ8CC14 138 aa8.27□□□□□ -1.09
Scn9a-201ENSMUST00000100063 Slc25a47Q6IS41 310 aa8.27□□□□□ -1.09
Scn9a-201ENSMUST00000100063 Il22ra2Q80XF5 230 aa8.27□□□□□ -1.09
Scn9a-201ENSMUST00000100063 Rhno1Q8K3A4 235 aa8.27□□□□□ -1.09
Scn9a-201ENSMUST00000100063 Rpl18aP62717 176 aaKnown RBP8.27□□□□□ -1.09
Scn9a-201ENSMUST00000100063 Pcnx3Q8VI59 2028 aa8.27□□□□□ -1.09
Scn9a-201ENSMUST00000100063 Ifitm1Q9D103 106 aa8.27□□□□□ -1.09
Scn9a-201ENSMUST00000100063 Ighv1-52A0A0A6YXC3 117 aa8.26□□□□□ -1.09
Scn9a-201ENSMUST00000100063 BC035044E0CXF8 138 aa8.26□□□□□ -1.09
Scn9a-201ENSMUST00000100063 4930583I09RikQ9D2E3 102 aa8.26□□□□□ -1.09
Scn9a-201ENSMUST00000100063 Gm20517G3UVU6 152 aa8.26□□□□□ -1.09
Scn9a-201ENSMUST00000100063 Foxf1Q61080 378 aa8.26□□□□□ -1.09
Scn9a-201ENSMUST00000100063 BC048562Q80ZQ7 204 aa8.26□□□□□ -1.09
Scn9a-201ENSMUST00000100063 Gm15294V9GXA7 121 aa8.26□□□□□ -1.09
Scn9a-201ENSMUST00000100063 Gm10203F6QJ09 66 aa8.26□□□□□ -1.09
Scn9a-201ENSMUST00000100063 Zc2hc1aQ8BJH1 324 aa8.26□□□□□ -1.09
Scn9a-201ENSMUST00000100063 NmbQ9CR53 121 aa8.26□□□□□ -1.09
Scn9a-201ENSMUST00000100063 Iglv1A0A075B663 117 aa8.26□□□□□ -1.09
Scn9a-201ENSMUST00000100063 Ighv1-19A0A0A6YWX0 117 aa8.26□□□□□ -1.09
Scn9a-201ENSMUST00000100063 Tmem190Q9D2E9 166 aa8.26□□□□□ -1.09
Scn9a-201ENSMUST00000100063 Ighv1-50A0A075B5W1 117 aa8.25□□□□□ -1.09
Scn9a-201ENSMUST00000100063 Gm10647E9Q8X0 124 aa8.25□□□□□ -1.09
Scn9a-201ENSMUST00000100063 Prh1P05142 261 aa8.25□□□□□ -1.09
Scn9a-201ENSMUST00000100063 Runx1Q03347 451 aa8.25□□□□□ -1.09
Scn9a-201ENSMUST00000100063 Fstl3Q9EQC7 256 aa8.25□□□□□ -1.09
Scn9a-201ENSMUST00000100063 Igkv8-21A0A140T8P7 120 aa8.25□□□□□ -1.09
Scn9a-201ENSMUST00000100063 Igkv3-3A0A140T8Q0 119 aa8.25□□□□□ -1.09
Scn9a-201ENSMUST00000100063 Q99M08 65 aa8.25□□□□□ -1.09
Scn9a-201ENSMUST00000100063 Camk2n2Q78WH7 79 aa8.25□□□□□ -1.09
Scn9a-201ENSMUST00000100063 B230307C23RikQ8BLB2 64 aa8.25□□□□□ -1.09
Scn9a-201ENSMUST00000100063 Ssbp1Q9CYR0 152 aaKnown RBP8.25□□□□□ -1.09
Scn9a-201ENSMUST00000100063 Spink12Q9D256 87 aa8.25□□□□□ -1.09
Scn9a-201ENSMUST00000100063 Trav9d-3A0A075B695 113 aa8.25□□□□□ -1.09
Scn9a-201ENSMUST00000100063 MlanaQ2TA50 113 aa8.25□□□□□ -1.09
Scn9a-201ENSMUST00000100063 4930447F04RikA2AFR2 126 aa8.25□□□□□ -1.09
Scn9a-201ENSMUST00000100063 KprpB2RUR4 657 aa8.25□□□□□ -1.09
Scn9a-201ENSMUST00000100063 Ttc28Q80XJ3 2450 aa8.24□□□□□ -1.09
Scn9a-201ENSMUST00000100063 Jpt2Q6PGH2 190 aaKnown RBP8.24□□□□□ -1.09
Scn9a-201ENSMUST00000100063 Gm10306Q9CUK2 115 aa8.24□□□□□ -1.09
Scn9a-201ENSMUST00000100063 Plxna2P70207 1894 aa8.24□□□□□ -1.09
Scn9a-201ENSMUST00000100063 Col4a3Q9QZS0 1669 aa8.24□□□□□ -1.09
Scn9a-201ENSMUST00000100063 Trav9-2A0A075B647 113 aa8.24□□□□□ -1.09
Scn9a-201ENSMUST00000100063 Trav9-4A0A0B4J1K2 113 aa8.24□□□□□ -1.09
Scn9a-201ENSMUST00000100063 PscaP57096 123 aa8.24□□□□□ -1.09
Scn9a-201ENSMUST00000100063 Hist1h2bmP10854 126 aa8.24□□□□□ -1.09
Scn9a-201ENSMUST00000100063 Sdhaf1Q3U276 118 aa8.24□□□□□ -1.09
Scn9a-201ENSMUST00000100063 Hist1h2bhQ64478 126 aa8.24□□□□□ -1.09
Scn9a-201ENSMUST00000100063 Hist2h2bbQ64525 126 aa8.24□□□□□ -1.09
Scn9a-201ENSMUST00000100063 Hist1h2bcQ6ZWY9 126 aaKnown RBP8.24□□□□□ -1.09
Scn9a-201ENSMUST00000100063 9930022D16RikQ8BG27 128 aa8.24□□□□□ -1.09
Scn9a-201ENSMUST00000100063 Bcl6bO88282 474 aa8.24□□□□□ -1.09
Scn9a-201ENSMUST00000100063 Sec61gP60060 68 aa8.24□□□□□ -1.09
Scn9a-201ENSMUST00000100063 COA4Q8BT51 87 aa8.24□□□□□ -1.09
Scn9a-201ENSMUST00000100063 Rasl10aQ8K5A4 203 aa8.24□□□□□ -1.09
Scn9a-201ENSMUST00000100063 Igkv5-37A0A140T8N4 115 aa8.24□□□□□ -1.09
Scn9a-201ENSMUST00000100063 P01739 132 aa8.24□□□□□ -1.09
Scn9a-201ENSMUST00000100063 Prp2P05143 317 aa8.24□□□□□ -1.09
Scn9a-201ENSMUST00000100063 Gtsf1Q9DAN6 167 aa8.24□□□□□ -1.09
Scn9a-201ENSMUST00000100063 Cend1Q9JKC6 149 aa8.24□□□□□ -1.09
Scn9a-201ENSMUST00000100063 Gm10251J3QPM5 127 aa8.24□□□□□ -1.09
Scn9a-201ENSMUST00000100063 TectaO08523 2155 aa8.23□□□□□ -1.09
Retrieved 100 of 22,080 RNA–protein pairs in 92.4 ms