RNA–Protein interactions for RNA: ENSMUST00000087883.12

Col3a1-201, Transcript of Collagen alpha-1(III) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col3a1, Length 5,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1-201ENSMUST00000087883 Ros1Q78DX7 2340 aa11.03□□□□□ -0.64
Col3a1-201ENSMUST00000087883 Srsf2Q62093 221 aaKnown RBP11.02□□□□□ -0.65
Col3a1-201ENSMUST00000087883 Sptbn2Q68FG2 2388 aa11.02□□□□□ -0.65
Col3a1-201ENSMUST00000087883 Dock3Q8CIQ7 2027 aa11.02□□□□□ -0.65
Col3a1-201ENSMUST00000087883 Igkv4-74A0A0B4J1I3 119 aa11.02□□□□□ -0.65
Col3a1-201ENSMUST00000087883 Igkv6-15A0A140T8M5 115 aa11.02□□□□□ -0.65
Col3a1-201ENSMUST00000087883 Reg3gO09049 174 aa11.02□□□□□ -0.65
Col3a1-201ENSMUST00000087883 Gm12253Q5NC48 229 aa11.02□□□□□ -0.65
Col3a1-201ENSMUST00000087883 BC048562Q80ZQ7 204 aa11.02□□□□□ -0.65
Col3a1-201ENSMUST00000087883 Fam216bQ8CC14 138 aa11.02□□□□□ -0.65
Col3a1-201ENSMUST00000087883 ThadaA8C756 1938 aa11.02□□□□□ -0.65
Col3a1-201ENSMUST00000087883 Cox7cP17665 63 aa11.01□□□□□ -0.65
Col3a1-201ENSMUST00000087883 Olfr311Q5NC59 308 aa11.01□□□□□ -0.65
Col3a1-201ENSMUST00000087883 Dmrtc1c1Q9D410 238 aa11.01□□□□□ -0.65
Col3a1-201ENSMUST00000087883 Igkv8-34A0A0G2JDU0 121 aa11.01□□□□□ -0.65
Col3a1-201ENSMUST00000087883 Mrpl52Q9D0Y8 121 aa11.01□□□□□ -0.65
Col3a1-201ENSMUST00000087883 Sp5Q9JHX2 398 aa11.01□□□□□ -0.65
Col3a1-201ENSMUST00000087883 Ighv1-74A0A0G2JGK2 117 aa11□□□□□ -0.65
Col3a1-201ENSMUST00000087883 Loxl1P97873 607 aa11□□□□□ -0.65
Col3a1-201ENSMUST00000087883 Rnf114Q9ET26 229 aa11□□□□□ -0.65
Col3a1-201ENSMUST00000087883 TprF6ZDS4 2431 aaKnown RBP11□□□□□ -0.65
Col3a1-201ENSMUST00000087883 Ly6g5bQ8K1T4 194 aa11□□□□□ -0.65
Col3a1-201ENSMUST00000087883 3110082J24RikF6Z6Z2 108 aa11□□□□□ -0.65
Col3a1-201ENSMUST00000087883 P01739 132 aa11□□□□□ -0.65
Col3a1-201ENSMUST00000087883 Gm19684G3UZ45 117 aa10.99□□□□□ -0.65
Col3a1-201ENSMUST00000087883 Trbv14A0A140T8L9 115 aa10.99□□□□□ -0.65
Col3a1-201ENSMUST00000087883 Tmem210Q9D2F0 147 aa10.99□□□□□ -0.65
Col3a1-201ENSMUST00000087883 Akap6E9Q9K8 2307 aa10.99□□□□□ -0.65
Col3a1-201ENSMUST00000087883 Crlf1Q9JM58 425 aa10.99□□□□□ -0.65
Col3a1-201ENSMUST00000087883 Gm10775Q3V290 127 aa10.98□□□□□ -0.65
Col3a1-201ENSMUST00000087883 Ighv1-50A0A075B5W1 117 aa10.98□□□□□ -0.65
Col3a1-201ENSMUST00000087883 P06330 118 aa10.98□□□□□ -0.65
Col3a1-201ENSMUST00000087883 Plscr4P58196 326 aa10.98□□□□□ -0.65
Col3a1-201ENSMUST00000087883 Tnrc6aQ3UHK8 1896 aaKnown RBP10.98□□□□□ -0.65
Col3a1-201ENSMUST00000087883 Ighv1-4A0A075B5T4 117 aa10.98□□□□□ -0.65
Col3a1-201ENSMUST00000087883 Q08AU9 97 aa10.98□□□□□ -0.65
Col3a1-201ENSMUST00000087883 RlfA2A7F4 1918 aa10.98□□□□□ -0.65
Col3a1-201ENSMUST00000087883 Qrich2A0A140LIY9 2337 aa10.98□□□□□ -0.65
Col3a1-201ENSMUST00000087883 Tanc1Q0VGY8 1856 aa10.97□□□□□ -0.65
Col3a1-201ENSMUST00000087883 Fam241bQ9D882 120 aa10.97□□□□□ -0.65
Col3a1-201ENSMUST00000087883 Ighv3-6P18531 116 aa10.97□□□□□ -0.65
Col3a1-201ENSMUST00000087883 Gm9961Q8BNV2 113 aa10.97□□□□□ -0.65
Col3a1-201ENSMUST00000087883 Spink8Q09TK9 105 aa10.97□□□□□ -0.65
Col3a1-201ENSMUST00000087883 Nup210lQ9D2F7 1881 aa10.96□□□□□ -0.65
Col3a1-201ENSMUST00000087883 Ang4Q3TMQ6 144 aa10.96□□□□□ -0.65
Col3a1-201ENSMUST00000087883 Nxph4G3X9N5 304 aa10.96□□□□□ -0.66
Col3a1-201ENSMUST00000087883 P04945 108 aa10.96□□□□□ -0.66
Col3a1-201ENSMUST00000087883 Edn3P48299 214 aa10.96□□□□□ -0.66
Col3a1-201ENSMUST00000087883 Ntf4Q80VU4 209 aa10.96□□□□□ -0.66
Col3a1-201ENSMUST00000087883 Fam110aQ8R184 296 aa10.96□□□□□ -0.66
Col3a1-201ENSMUST00000087883 P01837 106 aa10.96□□□□□ -0.66
Col3a1-201ENSMUST00000087883 Foxi2Q3I5G5 311 aa10.96□□□□□ -0.66
Col3a1-201ENSMUST00000087883 Plxna3P70208 1872 aa10.96□□□□□ -0.66
Col3a1-201ENSMUST00000087883 Iglc1A0A0G2JE99 106 aa10.95□□□□□ -0.66
Col3a1-201ENSMUST00000087883 Ighv1-77A0A0G2JGS9 117 aa10.95□□□□□ -0.66
Col3a1-201ENSMUST00000087883 P01843 105 aa10.95□□□□□ -0.66
Col3a1-201ENSMUST00000087883 Dand5Q76LW6 185 aa10.95□□□□□ -0.66
Col3a1-201ENSMUST00000087883 Zc2hc1aQ8BJH1 324 aa10.95□□□□□ -0.66
Col3a1-201ENSMUST00000087883 Gm9936Q8C864 160 aa10.95□□□□□ -0.66
Col3a1-201ENSMUST00000087883 Lst1O08843 95 aa10.95□□□□□ -0.66
Col3a1-201ENSMUST00000087883 Cox17P56394 63 aa10.95□□□□□ -0.66
Col3a1-201ENSMUST00000087883 Fam110dQ80X91 271 aa10.95□□□□□ -0.66
Col3a1-201ENSMUST00000087883 Brk1Q91VR8 75 aa10.95□□□□□ -0.66
Col3a1-201ENSMUST00000087883 MpdzQ8VBX6 2055 aa10.95□□□□□ -0.66
Col3a1-201ENSMUST00000087883 Foxc1Q61572 553 aa10.95□□□□□ -0.66
Col3a1-201ENSMUST00000087883 PoleQ9WVF7 2283 aa10.94□□□□□ -0.66
Col3a1-201ENSMUST00000087883 Ighv5-8A0A075B676 92 aa10.94□□□□□ -0.66
Col3a1-201ENSMUST00000087883 MifP34884 115 aaKnown RBP10.94□□□□□ -0.66
Col3a1-201ENSMUST00000087883 C920008G01RikA0A0B4J1N1 112 aa10.94□□□□□ -0.66
Col3a1-201ENSMUST00000087883 Glrp1E9Q9S8 174 aa10.94□□□□□ -0.66
Col3a1-201ENSMUST00000087883 Pkd1l3Q2EG98 2201 aa10.94□□□□□ -0.66
Col3a1-201ENSMUST00000087883 Gm5941Q497P9 117 aa10.93□□□□□ -0.66
Col3a1-201ENSMUST00000087883 Nop10Q9CQS2 64 aa10.93□□□□□ -0.66
Col3a1-201ENSMUST00000087883 Ighv13-2A0A0A6YWN3 119 aa10.93□□□□□ -0.66
Col3a1-201ENSMUST00000087883 Fstl3Q9EQC7 256 aa10.93□□□□□ -0.66
Col3a1-201ENSMUST00000087883 Ucn2Q99ML8 113 aa10.93□□□□□ -0.66
Col3a1-201ENSMUST00000087883 Myo9bQ9QY06 2114 aa10.92□□□□□ -0.66
Col3a1-201ENSMUST00000087883 Prr14lE9Q7C4 1971 aa10.92□□□□□ -0.66
Col3a1-201ENSMUST00000087883 PtprfA2A8L5 1898 aa10.92□□□□□ -0.66
Col3a1-201ENSMUST00000087883 Gm9970F6ZED4 185 aa10.92□□□□□ -0.66
Col3a1-201ENSMUST00000087883 P01756 117 aa10.92□□□□□ -0.66
Col3a1-201ENSMUST00000087883 P01757 117 aa10.92□□□□□ -0.66
Col3a1-201ENSMUST00000087883 Trbv13-1A0A0B4J1P8 112 aa10.92□□□□□ -0.66
Col3a1-201ENSMUST00000087883 Ccl21aP84444 133 aa10.92□□□□□ -0.66
Col3a1-201ENSMUST00000087883 Ccl21bP86792 133 aa10.92□□□□□ -0.66
Col3a1-201ENSMUST00000087883 Ccl21cP86793 133 aa10.92□□□□□ -0.66
Col3a1-201ENSMUST00000087883 PemtQ61907 199 aa10.92□□□□□ -0.66
Col3a1-201ENSMUST00000087883 Dock4P59764 1978 aa10.91□□□□□ -0.66
Col3a1-201ENSMUST00000087883 Gm19410A0A140LJC7 2098 aa10.91□□□□□ -0.66
Col3a1-201ENSMUST00000087883 P01750 117 aa10.91□□□□□ -0.66
Col3a1-201ENSMUST00000087883 Gm26602M0QWA4 95 aa10.91□□□□□ -0.66
Col3a1-201ENSMUST00000087883 Ndufs7Q9DC70 224 aa10.91□□□□□ -0.66
Col3a1-201ENSMUST00000087883 Plxnd1Q3UH93 1925 aa10.9□□□□□ -0.66
Col3a1-201ENSMUST00000087883 Igkv1-122A0A140T8M9 119 aa10.9□□□□□ -0.66
Col3a1-201ENSMUST00000087883 Gp9O88186 177 aa10.9□□□□□ -0.66
Col3a1-201ENSMUST00000087883 4930546C10RikE9Q4Y3 121 aa10.9□□□□□ -0.66
Col3a1-201ENSMUST00000087883 LoxP28301 411 aa10.9□□□□□ -0.66
Col3a1-201ENSMUST00000087883 OdaphJ3QNT8 126 aa10.9□□□□□ -0.66
Col3a1-201ENSMUST00000087883 P04940 107 aa10.9□□□□□ -0.66
Col3a1-201ENSMUST00000087883 P04941 107 aa10.9□□□□□ -0.66
Retrieved 100 of 22,080 RNA–protein pairs in 118.8 ms