RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 Ighv1-74A0A0G2JGK2 117 aa7.48□□□□□ -1.21
Ccdc40-202ENSMUST00000053440 P01725 110 aa7.48□□□□□ -1.21
Ccdc40-202ENSMUST00000053440 S100a4P07091 101 aa7.48□□□□□ -1.21
Ccdc40-202ENSMUST00000053440 Edn3P48299 214 aa7.48□□□□□ -1.21
Ccdc40-202ENSMUST00000053440 Ighv3-1A0A075B5S6 116 aa7.48□□□□□ -1.21
Ccdc40-202ENSMUST00000053440 A130051J06RikQ8CAU1 227 aa7.48□□□□□ -1.21
Ccdc40-202ENSMUST00000053440 Snai3Q9QY31 287 aa7.48□□□□□ -1.21
Ccdc40-202ENSMUST00000053440 Ncor2Q9WU42 2472 aaKnown RBP7.48□□□□□ -1.21
Ccdc40-202ENSMUST00000053440 Tmem238lA0A1B0GS74 79 aa7.48□□□□□ -1.21
Ccdc40-202ENSMUST00000053440 S100a8P27005 89 aa7.48□□□□□ -1.21
Ccdc40-202ENSMUST00000053440 Defb33Q30KN3 62 aa7.48□□□□□ -1.21
Ccdc40-202ENSMUST00000053440 Q4KKZ1 196 aa7.48□□□□□ -1.21
Ccdc40-202ENSMUST00000053440 Ighv1-53A0A075B5W3 117 aa7.47□□□□□ -1.21
Ccdc40-202ENSMUST00000053440 Igkv20-101-2A0A0G2JDU3 113 aa7.47□□□□□ -1.21
Ccdc40-202ENSMUST00000053440 Fam240bJ3QMB3 78 aa7.47□□□□□ -1.21
Ccdc40-202ENSMUST00000053440 P18527 97 aa7.47□□□□□ -1.21
Ccdc40-202ENSMUST00000053440 Zfp248Q640N4 576 aa7.47□□□□□ -1.21
Ccdc40-202ENSMUST00000053440 Prr3Q811B5 190 aaKnown RBP7.47□□□□□ -1.21
Ccdc40-202ENSMUST00000053440 Odf3Q920N1 254 aa7.47□□□□□ -1.21
Ccdc40-202ENSMUST00000053440 Q9D727 114 aa7.47□□□□□ -1.21
Ccdc40-202ENSMUST00000053440 Rs1Q9Z1L4 224 aa7.47□□□□□ -1.21
Ccdc40-202ENSMUST00000053440 Brd3osA0A1B0GRB6 84 aa7.47□□□□□ -1.21
Ccdc40-202ENSMUST00000053440 1700067P10RikG3X8U2 183 aa7.47□□□□□ -1.21
Ccdc40-202ENSMUST00000053440 Esp3J3QN49 87 aa7.47□□□□□ -1.21
Ccdc40-202ENSMUST00000053440 TshbP12656 138 aa7.47□□□□□ -1.21
Ccdc40-202ENSMUST00000053440 Ube2e1P52482 193 aa7.47□□□□□ -1.21
Ccdc40-202ENSMUST00000053440 Gm5464Q3UY29 175 aa7.47□□□□□ -1.21
Ccdc40-202ENSMUST00000053440 Srsf2Q62093 221 aaKnown RBP7.47□□□□□ -1.21
Ccdc40-202ENSMUST00000053440 Mrpl36Q99N90 102 aa7.47□□□□□ -1.21
Ccdc40-202ENSMUST00000053440 Atxn7l1Q9CZ05 146 aa7.47□□□□□ -1.21
Ccdc40-202ENSMUST00000053440 Ankhd1E9PUR0 2548 aaKnown RBP7.47□□□□□ -1.21
Ccdc40-202ENSMUST00000053440 Ighv1-4A0A075B5T4 117 aa7.47□□□□□ -1.21
Ccdc40-202ENSMUST00000053440 Sap30O88574 220 aa7.47□□□□□ -1.21
Ccdc40-202ENSMUST00000053440 Obox1Q9D350 204 aa7.47□□□□□ -1.21
Ccdc40-202ENSMUST00000053440 Pkd1l2Q7TN88 2461 aa7.46□□□□□ -1.21
Ccdc40-202ENSMUST00000053440 Ep300B2RWS6 2412 aa7.46□□□□□ -1.21
Ccdc40-202ENSMUST00000053440 Ndufa1O35683 70 aa7.46□□□□□ -1.21
Ccdc40-202ENSMUST00000053440 P06334 169 aa7.46□□□□□ -1.21
Ccdc40-202ENSMUST00000053440 Trav7-2Q5R1I3 112 aa7.46□□□□□ -1.21
Ccdc40-202ENSMUST00000053440 Olfr312Q7TRZ9 308 aa7.46□□□□□ -1.21
Ccdc40-202ENSMUST00000053440 Ighv1-22A0A075B5U7 117 aa7.46□□□□□ -1.22
Ccdc40-202ENSMUST00000053440 Ighv3-4A0A0A6YXF1 117 aa7.46□□□□□ -1.22
Ccdc40-202ENSMUST00000053440 Srsf1Q6PDM2 248 aaKnown RBP7.46□□□□□ -1.22
Ccdc40-202ENSMUST00000053440 Crip3Q6Q6R3 243 aa7.46□□□□□ -1.22
Ccdc40-202ENSMUST00000053440 Csmd2V9GX34 3611 aa7.46□□□□□ -1.22
Ccdc40-202ENSMUST00000053440 Ighv1-80A0A075B5Y3 117 aa7.45□□□□□ -1.22
Ccdc40-202ENSMUST00000053440 Igkv4-71A0A0G2JEH0 117 aa7.45□□□□□ -1.22
Ccdc40-202ENSMUST00000053440 4930447F04RikA2AFR2 126 aa7.45□□□□□ -1.22
Ccdc40-202ENSMUST00000053440 RhohQ9D3G9 191 aa7.45□□□□□ -1.22
Ccdc40-202ENSMUST00000053440 Ighv3-8A0A075B5T0 131 aa7.45□□□□□ -1.22
Ccdc40-202ENSMUST00000053440 Trbv13-1A0A0B4J1P8 112 aa7.45□□□□□ -1.22
Ccdc40-202ENSMUST00000053440 Gm45753A0A1C7CYU8 86 aa7.45□□□□□ -1.22
Ccdc40-202ENSMUST00000053440 Gm17430F6RSK3 157 aa7.45□□□□□ -1.22
Ccdc40-202ENSMUST00000053440 Cdx4Q07424 282 aa7.45□□□□□ -1.22
Ccdc40-202ENSMUST00000053440 FshbQ60687 130 aa7.45□□□□□ -1.22
Ccdc40-202ENSMUST00000053440 TctaQ8VEA7 122 aa7.45□□□□□ -1.22
Ccdc40-202ENSMUST00000053440 Arl3Q9WUL7 182 aa7.45□□□□□ -1.22
Ccdc40-202ENSMUST00000053440 Ighv1-9A0A0A6YW37 117 aa7.45□□□□□ -1.22
Ccdc40-202ENSMUST00000053440 HilpdaQ9JLS0 64 aa7.45□□□□□ -1.22
Ccdc40-202ENSMUST00000053440 Abca2P41234 2434 aa7.45□□□□□ -1.22
Ccdc40-202ENSMUST00000053440 Gm10271F6WY25 52 aa7.44□□□□□ -1.22
Ccdc40-202ENSMUST00000053440 Defa37K9J724 93 aa7.44□□□□□ -1.22
Ccdc40-202ENSMUST00000053440 P01741 114 aa7.44□□□□□ -1.22
Ccdc40-202ENSMUST00000053440 Cela2aP05208 271 aa7.44□□□□□ -1.22
Ccdc40-202ENSMUST00000053440 Defa5P28312 93 aa7.44□□□□□ -1.22
Ccdc40-202ENSMUST00000053440 Tex26Q0VB26 296 aa7.44□□□□□ -1.22
Ccdc40-202ENSMUST00000053440 Olfr311Q5NC59 308 aa7.44□□□□□ -1.22
Ccdc40-202ENSMUST00000053440 Shisa9Q9CZN4 424 aa7.44□□□□□ -1.22
Ccdc40-202ENSMUST00000053440 Hrct1Q9D6B9 109 aa7.44□□□□□ -1.22
Ccdc40-202ENSMUST00000053440 Slamf6Q9ET39 351 aa7.44□□□□□ -1.22
Ccdc40-202ENSMUST00000053440 Igkv4-57-1A0A075B5M4 119 aa7.44□□□□□ -1.22
Ccdc40-202ENSMUST00000053440 Gm5878E9PUB3 99 aa7.44□□□□□ -1.22
Ccdc40-202ENSMUST00000053440 Hint1P70349 126 aaKnown RBP7.44□□□□□ -1.22
Ccdc40-202ENSMUST00000053440 Hcfc1Q61191 2045 aaKnown RBP7.44□□□□□ -1.22
Ccdc40-202ENSMUST00000053440 Cox11Q6P8I6 275 aa7.44□□□□□ -1.22
Ccdc40-202ENSMUST00000053440 Hbb-bsA8DUK4 147 aa7.44□□□□□ -1.22
Ccdc40-202ENSMUST00000053440 Hbb-b1P02088 147 aa7.44□□□□□ -1.22
Ccdc40-202ENSMUST00000053440 PolP10400 120 aa7.44□□□□□ -1.22
Ccdc40-202ENSMUST00000053440 Sumo2P61957 95 aaKnown RBP7.44□□□□□ -1.22
Ccdc40-202ENSMUST00000053440 Tmem170bP86050 132 aa7.44□□□□□ -1.22
Ccdc40-202ENSMUST00000053440 Umad1E0CX23 159 aa7.43□□□□□ -1.22
Ccdc40-202ENSMUST00000053440 Mrps12O35680 139 aa7.43□□□□□ -1.22
Ccdc40-202ENSMUST00000053440 Csn3P06796 181 aa7.43□□□□□ -1.22
Ccdc40-202ENSMUST00000053440 Edn2P22389 175 aa7.43□□□□□ -1.22
Ccdc40-202ENSMUST00000053440 Defa24Q5G865 93 aa7.43□□□□□ -1.22
Ccdc40-202ENSMUST00000053440 Nit2Q9JHW2 276 aa7.43□□□□□ -1.22
Ccdc40-202ENSMUST00000053440 Iglc1A0A0G2JE99 106 aa7.43□□□□□ -1.22
Ccdc40-202ENSMUST00000053440 Gm44965A0A0N4SVR3 59 aa7.43□□□□□ -1.22
Ccdc40-202ENSMUST00000053440 Gm10521E9PZK0 135 aa7.43□□□□□ -1.22
Ccdc40-202ENSMUST00000053440 P01843 105 aa7.43□□□□□ -1.22
Ccdc40-202ENSMUST00000053440 Lmo4P61969 165 aa7.43□□□□□ -1.22
Ccdc40-202ENSMUST00000053440 Odf1Q61999 247 aa7.43□□□□□ -1.22
Ccdc40-202ENSMUST00000053440 Gm14137Q8CE97 175 aa7.43□□□□□ -1.22
Ccdc40-202ENSMUST00000053440 Dpm3Q9D1Q4 92 aa7.43□□□□□ -1.22
Ccdc40-202ENSMUST00000053440 AcacbE9Q4Z2 2448 aa7.43□□□□□ -1.22
Ccdc40-202ENSMUST00000053440 Socs3O35718 225 aa7.43□□□□□ -1.22
Ccdc40-202ENSMUST00000053440 P01747 120 aa7.43□□□□□ -1.22
Ccdc40-202ENSMUST00000053440 Defa3P28310 93 aa7.43□□□□□ -1.22
Ccdc40-202ENSMUST00000053440 Defa10P50708 93 aa7.43□□□□□ -1.22
Ccdc40-202ENSMUST00000053440 Defa15P50713 93 aa7.43□□□□□ -1.22
Retrieved 100 of 22,080 RNA–protein pairs in 36.2 ms