RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 Tac4Q99N14 128 aa5.39□□□□□ -1.55
Bdnf-201ENSMUST00000053317 Trav16d-dv11A0A075B617 117 aa5.38□□□□□ -1.55
Bdnf-201ENSMUST00000053317 Trav16nA0A075B634 117 aa5.38□□□□□ -1.55
Bdnf-201ENSMUST00000053317 Tmem141A2AJB2 108 aa5.38□□□□□ -1.55
Bdnf-201ENSMUST00000053317 9230109A22RikQ8BHE6 111 aa5.38□□□□□ -1.55
Bdnf-201ENSMUST00000053317 Trav7n-4A0A075B620 113 aa5.38□□□□□ -1.55
Bdnf-201ENSMUST00000053317 Trbv13-3A0A0B4J1H2 113 aa5.38□□□□□ -1.55
Bdnf-201ENSMUST00000053317 Trav7d-3Q5R1I1 112 aa5.38□□□□□ -1.55
Bdnf-201ENSMUST00000053317 Hspe1Q64433 102 aaKnown RBP5.38□□□□□ -1.55
Bdnf-201ENSMUST00000053317 Zmat4Q8BZ94 229 aa5.38□□□□□ -1.55
Bdnf-201ENSMUST00000053317 Tmem91Q8C581 172 aa5.38□□□□□ -1.55
Bdnf-201ENSMUST00000053317 Olfr211Q8VGH2 309 aa5.38□□□□□ -1.55
Bdnf-201ENSMUST00000053317 1700008P02RikQ9DAJ8 175 aa5.38□□□□□ -1.55
Bdnf-201ENSMUST00000053317 Cd5lQ9QWK4 352 aa5.38□□□□□ -1.55
Bdnf-201ENSMUST00000053317 Trav6d-5A0A075B6B9 112 aa5.38□□□□□ -1.55
Bdnf-201ENSMUST00000053317 Gm11565A2A4M7 156 aa5.38□□□□□ -1.55
Bdnf-201ENSMUST00000053317 PigyP0C1P0 71 aa5.38□□□□□ -1.55
Bdnf-201ENSMUST00000053317 Ca1P13634 261 aa5.38□□□□□ -1.55
Bdnf-201ENSMUST00000053317 4930596D02RikQ3V0H9 216 aa5.38□□□□□ -1.55
Bdnf-201ENSMUST00000053317 Spsb3Q571F5 354 aa5.38□□□□□ -1.55
Bdnf-201ENSMUST00000053317 CdsnQ7TPC1 561 aa5.38□□□□□ -1.55
Bdnf-201ENSMUST00000053317 Nhlrc1Q8BR37 401 aa5.38□□□□□ -1.55
Bdnf-201ENSMUST00000053317 Msrb3Q8BU85 253 aa5.38□□□□□ -1.55
Bdnf-201ENSMUST00000053317 Cox19Q8K0C8 92 aa5.38□□□□□ -1.55
Bdnf-201ENSMUST00000053317 Higd1bQ99JY6 98 aa5.38□□□□□ -1.55
Bdnf-201ENSMUST00000053317 Mrpl32Q9DCI9 187 aaKnown RBP5.38□□□□□ -1.55
Bdnf-201ENSMUST00000053317 Nat6Q9R123 314 aa5.38□□□□□ -1.55
Bdnf-201ENSMUST00000053317 Slc25a20Q9Z2Z6 301 aaKnown RBP5.38□□□□□ -1.55
Bdnf-201ENSMUST00000053317 Trav9-1A0A075B601 112 aa5.37□□□□□ -1.55
Bdnf-201ENSMUST00000053317 Krtap28-13A0A087WQP5 138 aa5.37□□□□□ -1.55
Bdnf-201ENSMUST00000053317 MsmbO08540 113 aa5.37□□□□□ -1.55
Bdnf-201ENSMUST00000053317 Gm10767Q3TQP0 103 aa5.37□□□□□ -1.55
Bdnf-201ENSMUST00000053317 Cox11Q6P8I6 275 aa5.37□□□□□ -1.55
Bdnf-201ENSMUST00000053317 Lypd1Q8BLC3 141 aa5.37□□□□□ -1.55
Bdnf-201ENSMUST00000053317 Gm9958Q8C9U4 106 aa5.37□□□□□ -1.55
Bdnf-201ENSMUST00000053317 Gatad1Q920S3 266 aa5.37□□□□□ -1.55
Bdnf-201ENSMUST00000053317 Prss29Q99MS4 279 aa5.37□□□□□ -1.55
Bdnf-201ENSMUST00000053317 UrahQ9CRB3 118 aa5.37□□□□□ -1.55
Bdnf-201ENSMUST00000053317 Trav6d-7A0A075B6B0 112 aa5.37□□□□□ -1.55
Bdnf-201ENSMUST00000053317 Igkv4-57A0A0A6YYE7 117 aa5.37□□□□□ -1.55
Bdnf-201ENSMUST00000053317 Efnb3O35393 340 aa5.37□□□□□ -1.55
Bdnf-201ENSMUST00000053317 Pet100P0DJE0 76 aa5.37□□□□□ -1.55
Bdnf-201ENSMUST00000053317 Loxl2P58022 776 aa5.37□□□□□ -1.55
Bdnf-201ENSMUST00000053317 Vdac2Q60930 295 aaKnown RBP5.37□□□□□ -1.55
Bdnf-201ENSMUST00000053317 Atp5lQ9CPQ8 103 aa5.37□□□□□ -1.55
Bdnf-201ENSMUST00000053317 Fmc1Q9CR13 113 aa5.37□□□□□ -1.55
Bdnf-201ENSMUST00000053317 Zfp951A0A087WRH0 451 aa5.37□□□□□ -1.55
Bdnf-201ENSMUST00000053317 KprpB2RUR4 657 aa5.37□□□□□ -1.55
Bdnf-201ENSMUST00000053317 Zfp248Q640N4 576 aa5.37□□□□□ -1.55
Bdnf-201ENSMUST00000053317 Ighv5-6A0A075B5Q0 117 aa5.37□□□□□ -1.55
Bdnf-201ENSMUST00000053317 Gm29423A0A087WRM1 55 aa5.37□□□□□ -1.55
Bdnf-201ENSMUST00000053317 Rnase1P00683 149 aa5.37□□□□□ -1.55
Bdnf-201ENSMUST00000053317 P01812 117 aa5.37□□□□□ -1.55
Bdnf-201ENSMUST00000053317 P04942 107 aa5.37□□□□□ -1.55
Bdnf-201ENSMUST00000053317 GchfrP99025 84 aa5.37□□□□□ -1.55
Bdnf-201ENSMUST00000053317 Zfand3Q497H0 227 aa5.37□□□□□ -1.55
Bdnf-201ENSMUST00000053317 Ang6Q5GAN0 147 aa5.37□□□□□ -1.55
Bdnf-201ENSMUST00000053317 Srsf7Q8BL97 267 aaKnown RBP5.37□□□□□ -1.55
Bdnf-201ENSMUST00000053317 Q8R092 253 aa5.37□□□□□ -1.55
Bdnf-201ENSMUST00000053317 3110018I06RikQ9CXS0 120 aa5.37□□□□□ -1.55
Bdnf-201ENSMUST00000053317 Vmn1r63Q9EPT1 300 aa5.37□□□□□ -1.55
Bdnf-201ENSMUST00000053317 Gm45521A0A1B0GRK0 198 aa5.36□□□□□ -1.55
Bdnf-201ENSMUST00000053317 Sprr3O09116 238 aa5.36□□□□□ -1.55
Bdnf-201ENSMUST00000053317 Defa21Q8C1P2 93 aa5.36□□□□□ -1.55
Bdnf-201ENSMUST00000053317 Rabac1Q9Z0S9 185 aa5.36□□□□□ -1.55
Bdnf-201ENSMUST00000053317 Trav6-4A0A075B6B4 115 aa5.36□□□□□ -1.55
Bdnf-201ENSMUST00000053317 Gm26727M0QWT1 121 aa5.36□□□□□ -1.55
Bdnf-201ENSMUST00000053317 CirbpP60824 172 aaKnown RBP5.36□□□□□ -1.55
Bdnf-201ENSMUST00000053317 Runx1Q03347 451 aa5.36□□□□□ -1.55
Bdnf-201ENSMUST00000053317 Gata4Q08369 441 aa5.36□□□□□ -1.55
Bdnf-201ENSMUST00000053317 Ang2Q64438 145 aa5.36□□□□□ -1.55
Bdnf-201ENSMUST00000053317 Wdr83osQ6ZWX0 106 aa5.36□□□□□ -1.55
Bdnf-201ENSMUST00000053317 Lsm4Q9QXA5 137 aaKnown RBP5.36□□□□□ -1.55
Bdnf-201ENSMUST00000053317 Srrm2Q8BTI8 2703 aaKnown RBP5.36□□□□□ -1.55
Bdnf-201ENSMUST00000053317 Dscaml1Q4VA61 2053 aa5.36□□□□□ -1.55
Bdnf-201ENSMUST00000053317 Ighv6-7A0A0A6YWU3 119 aa5.36□□□□□ -1.55
Bdnf-201ENSMUST00000053317 Ighv8-6A0A0A6YXA3 118 aa5.36□□□□□ -1.55
Bdnf-201ENSMUST00000053317 Ighv1-18A0A0A6YXN4 117 aa5.36□□□□□ -1.55
Bdnf-201ENSMUST00000053317 P01788 123 aa5.36□□□□□ -1.55
Bdnf-201ENSMUST00000053317 Hist1h4aP62806 103 aaKnown RBP5.36□□□□□ -1.55
Bdnf-201ENSMUST00000053317 Pex7P97865 318 aa5.36□□□□□ -1.55
Bdnf-201ENSMUST00000053317 Olfr1380Q7TQT5 311 aa5.36□□□□□ -1.55
Bdnf-201ENSMUST00000053317 Gm10306Q9CUK2 115 aa5.36□□□□□ -1.55
Bdnf-201ENSMUST00000053317 Gm11020F6ZGD5 61 aa5.35□□□□□ -1.55
Bdnf-201ENSMUST00000053317 Gm20726G3UX18 150 aa5.35□□□□□ -1.55
Bdnf-201ENSMUST00000053317 Hoxd3P09027 433 aa5.35□□□□□ -1.55
Bdnf-201ENSMUST00000053317 Gpx1P11352 201 aa5.35□□□□□ -1.55
Bdnf-201ENSMUST00000053317 Rbx1P62878 108 aa5.35□□□□□ -1.55
Bdnf-201ENSMUST00000053317 Znrf2Q71FD5 238 aa5.35□□□□□ -1.55
Bdnf-201ENSMUST00000053317 BC049762Q8C601 163 aa5.35□□□□□ -1.55
Bdnf-201ENSMUST00000053317 Ovol2Q8CIV7 274 aa5.35□□□□□ -1.55
Bdnf-201ENSMUST00000053317 Mrpl52Q9D0Y8 121 aa5.35□□□□□ -1.55
Bdnf-201ENSMUST00000053317 4933414I15RikQ9D4D5 133 aa5.35□□□□□ -1.55
Bdnf-201ENSMUST00000053317 Gm6525A0A0A6YW33 106 aa5.35□□□□□ -1.55
Bdnf-201ENSMUST00000053317 Ighv8-2A0A0A6YW58 119 aa5.35□□□□□ -1.55
Bdnf-201ENSMUST00000053317 Trbv3A0A0A6YYE2 117 aa5.35□□□□□ -1.55
Bdnf-201ENSMUST00000053317 Klk1b4P00757 256 aa5.35□□□□□ -1.55
Bdnf-201ENSMUST00000053317 P01820 115 aa5.35□□□□□ -1.55
Bdnf-201ENSMUST00000053317 P06334 169 aa5.35□□□□□ -1.55
Bdnf-201ENSMUST00000053317 Psmg4P0C7N9 123 aa5.35□□□□□ -1.55
Retrieved 100 of 22,080 RNA–protein pairs in 52.4 ms