RNA–Protein interactions for RNA: ENSMUST00000213114.1

Ldlr-202, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,318 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-202ENSMUST00000213114 Srsf1Q6PDM2 248 aaKnown RBP7.46□□□□□ -1.21
Ldlr-202ENSMUST00000213114 Myo18bE9PV66 2605 aa7.46□□□□□ -1.21
Ldlr-202ENSMUST00000213114 Lrp4Q8VI56 1905 aa7.46□□□□□ -1.21
Ldlr-202ENSMUST00000213114 Igkv4-91A0A075B5L2 119 aa7.46□□□□□ -1.22
Ldlr-202ENSMUST00000213114 Ighv1-16A0A075B5U1 98 aa7.46□□□□□ -1.22
Ldlr-202ENSMUST00000213114 Ighv1-39A0A075B5V5 117 aa7.46□□□□□ -1.22
Ldlr-202ENSMUST00000213114 Smlr1J3QMJ4 66 aa7.46□□□□□ -1.22
Ldlr-202ENSMUST00000213114 Mllt11P97783 90 aa7.46□□□□□ -1.22
Ldlr-202ENSMUST00000213114 Obox1Q9D350 204 aa7.46□□□□□ -1.22
Ldlr-202ENSMUST00000213114 Tmem141A2AJB2 108 aa7.46□□□□□ -1.22
Ldlr-202ENSMUST00000213114 Igll1P20764 209 aa7.46□□□□□ -1.22
Ldlr-202ENSMUST00000213114 Foxc2Q61850 494 aa7.46□□□□□ -1.22
Ldlr-202ENSMUST00000213114 Mapk1ip1lQ8BH93 242 aa7.46□□□□□ -1.22
Ldlr-202ENSMUST00000213114 Klk7Q91VE3 249 aa7.46□□□□□ -1.22
Ldlr-202ENSMUST00000213114 8030423J24RikQ9CX45 142 aa7.46□□□□□ -1.22
Ldlr-202ENSMUST00000213114 ApomQ9Z1R3 190 aa7.46□□□□□ -1.22
Ldlr-202ENSMUST00000213114 Cdh23Q99PF4 3354 aa7.46□□□□□ -1.22
Ldlr-202ENSMUST00000213114 Rpl36-ps4A0A140T8U4 117 aa7.46□□□□□ -1.22
Ldlr-202ENSMUST00000213114 Cox8bP48772 70 aa7.46□□□□□ -1.22
Ldlr-202ENSMUST00000213114 CirbpP60824 172 aaKnown RBP7.46□□□□□ -1.22
Ldlr-202ENSMUST00000213114 Minos1Q7TNS2 76 aa7.46□□□□□ -1.22
Ldlr-202ENSMUST00000213114 Dkk4Q8VEJ3 221 aa7.46□□□□□ -1.22
Ldlr-202ENSMUST00000213114 Rs1Q9Z1L4 224 aa7.46□□□□□ -1.22
Ldlr-202ENSMUST00000213114 Abca12E9Q876 2595 aa7.45□□□□□ -1.22
Ldlr-202ENSMUST00000213114 Chd7A2AJK6 2986 aaKnown RBP7.45□□□□□ -1.22
Ldlr-202ENSMUST00000213114 Gm933J3QPC1 141 aa7.45□□□□□ -1.22
Ldlr-202ENSMUST00000213114 9130213A22RikQ3V3T2 120 aa7.45□□□□□ -1.22
Ldlr-202ENSMUST00000213114 Trav7-2Q5R1I3 112 aa7.45□□□□□ -1.22
Ldlr-202ENSMUST00000213114 Olfr745Q7TRL9 328 aa7.45□□□□□ -1.22
Ldlr-202ENSMUST00000213114 Vmn1r216Q8R257 298 aa7.45□□□□□ -1.22
Ldlr-202ENSMUST00000213114 Prss29Q99MS4 279 aa7.45□□□□□ -1.22
Ldlr-202ENSMUST00000213114 Ighv1-58A0A075B5W9 117 aa7.45□□□□□ -1.22
Ldlr-202ENSMUST00000213114 Gm15217A2CG07 155 aa7.45□□□□□ -1.22
Ldlr-202ENSMUST00000213114 Umad1E0CX23 159 aa7.45□□□□□ -1.22
Ldlr-202ENSMUST00000213114 P04943 107 aa7.45□□□□□ -1.22
Ldlr-202ENSMUST00000213114 SbpP15501 199 aa7.45□□□□□ -1.22
Ldlr-202ENSMUST00000213114 Crip1P63254 77 aa7.45□□□□□ -1.22
Ldlr-202ENSMUST00000213114 Gm26558Q8BLW8 286 aa7.45□□□□□ -1.22
Ldlr-202ENSMUST00000213114 Tctex1d4Q8CDY7 219 aa7.45□□□□□ -1.22
Ldlr-202ENSMUST00000213114 MtorQ9JLN9 2549 aa7.45□□□□□ -1.22
Ldlr-202ENSMUST00000213114 Hivep3A2A884 2348 aa7.45□□□□□ -1.22
Ldlr-202ENSMUST00000213114 Ighv1-62-2A0A0A6YXZ4 119 aa7.45□□□□□ -1.22
Ldlr-202ENSMUST00000213114 Tmem238A9JSM3 176 aa7.45□□□□□ -1.22
Ldlr-202ENSMUST00000213114 Gm17732E9Q5I2 61 aa7.45□□□□□ -1.22
Ldlr-202ENSMUST00000213114 Olfr322Q5NCC8 327 aa7.45□□□□□ -1.22
Ldlr-202ENSMUST00000213114 Zfp248Q640N4 576 aa7.45□□□□□ -1.22
Ldlr-202ENSMUST00000213114 Oxld1Q9CR10 201 aa7.45□□□□□ -1.22
Ldlr-202ENSMUST00000213114 Trdv5A0A075B661 115 aa7.44□□□□□ -1.22
Ldlr-202ENSMUST00000213114 Gm7849D3YX03 116 aa7.44□□□□□ -1.22
Ldlr-202ENSMUST00000213114 F11rO88792 300 aa7.44□□□□□ -1.22
Ldlr-202ENSMUST00000213114 Cox6b1P56391 86 aaKnown RBP7.44□□□□□ -1.22
Ldlr-202ENSMUST00000213114 Tm2d1Q99MB3 208 aa7.44□□□□□ -1.22
Ldlr-202ENSMUST00000213114 Cxcl14Q9WUQ5 99 aa7.44□□□□□ -1.22
Ldlr-202ENSMUST00000213114 Ighv3-8A0A075B5T0 131 aa7.44□□□□□ -1.22
Ldlr-202ENSMUST00000213114 P01812 117 aa7.44□□□□□ -1.22
Ldlr-202ENSMUST00000213114 Mlst8Q9DCJ1 326 aa7.44□□□□□ -1.22
Ldlr-202ENSMUST00000213114 Igkv20-101-2A0A0G2JDU3 113 aa7.43□□□□□ -1.22
Ldlr-202ENSMUST00000213114 Gm35549A0A0N4SUS7 141 aa7.43□□□□□ -1.22
Ldlr-202ENSMUST00000213114 Ang6Q5GAN0 147 aa7.43□□□□□ -1.22
Ldlr-202ENSMUST00000213114 Them7Q9DCP4 223 aa7.43□□□□□ -1.22
Ldlr-202ENSMUST00000213114 Gm20379A0A087WR34 119 aa7.43□□□□□ -1.22
Ldlr-202ENSMUST00000213114 P01791 123 aa7.43□□□□□ -1.22
Ldlr-202ENSMUST00000213114 Gpr82Q8BZR0 328 aa7.43□□□□□ -1.22
Ldlr-202ENSMUST00000213114 Olfr1323Q8VF35 309 aa7.43□□□□□ -1.22
Ldlr-202ENSMUST00000213114 P01736 120 aa7.43□□□□□ -1.22
Ldlr-202ENSMUST00000213114 Olfr761Q7TRJ0 323 aa7.43□□□□□ -1.22
Ldlr-202ENSMUST00000213114 Cdpf1Q8R3A2 119 aa7.43□□□□□ -1.22
Ldlr-202ENSMUST00000213114 DscamQ9ERC8 2013 aa7.43□□□□□ -1.22
Ldlr-202ENSMUST00000213114 Igkv4-81A0A0G2JEY5 119 aa7.43□□□□□ -1.22
Ldlr-202ENSMUST00000213114 Tdgf1P51865 171 aa7.43□□□□□ -1.22
Ldlr-202ENSMUST00000213114 Defa20Q45VN2 95 aa7.43□□□□□ -1.22
Ldlr-202ENSMUST00000213114 MycbQ6P8Z1 170 aa7.43□□□□□ -1.22
Ldlr-202ENSMUST00000213114 Ormdl2Q9CQZ0 153 aa7.43□□□□□ -1.22
Ldlr-202ENSMUST00000213114 Dpm3Q9D1Q4 92 aa7.43□□□□□ -1.22
Ldlr-202ENSMUST00000213114 Sap30O88574 220 aa7.42□□□□□ -1.22
Ldlr-202ENSMUST00000213114 9230109A22RikQ8BHE6 111 aa7.42□□□□□ -1.22
Ldlr-202ENSMUST00000213114 Fam24aQ8CF27 98 aa7.42□□□□□ -1.22
Ldlr-202ENSMUST00000213114 Tmem101Q91VP7 257 aa7.42□□□□□ -1.22
Ldlr-202ENSMUST00000213114 OtorQ9JIE3 128 aa7.42□□□□□ -1.22
Ldlr-202ENSMUST00000213114 Ccl21aP84444 133 aa7.42□□□□□ -1.22
Ldlr-202ENSMUST00000213114 Ccl21bP86792 133 aa7.42□□□□□ -1.22
Ldlr-202ENSMUST00000213114 Ccl21cP86793 133 aa7.42□□□□□ -1.22
Ldlr-202ENSMUST00000213114 9130230L23RikQ8CC80 163 aa7.42□□□□□ -1.22
Ldlr-202ENSMUST00000213114 Gtsf1lQ9CWD0 151 aa7.42□□□□□ -1.22
Ldlr-202ENSMUST00000213114 Ighv5-6A0A075B5Q0 117 aa7.42□□□□□ -1.22
Ldlr-202ENSMUST00000213114 Trav14-3A0A075B607 120 aa7.42□□□□□ -1.22
Ldlr-202ENSMUST00000213114 Nsun4C4P6S0 806 aaKnown RBP7.42□□□□□ -1.22
Ldlr-202ENSMUST00000213114 Nat8b-psE0CYC6 232 aa7.42□□□□□ -1.22
Ldlr-202ENSMUST00000213114 Tns1E9Q0S6 1888 aaKnown RBP7.42□□□□□ -1.22
Ldlr-202ENSMUST00000213114 Gm37988J3QM41 62 aa7.42□□□□□ -1.22
Ldlr-202ENSMUST00000213114 Ss18Q62280 418 aa7.42□□□□□ -1.22
Ldlr-202ENSMUST00000213114 NpbQ8K4P1 119 aa7.42□□□□□ -1.22
Ldlr-202ENSMUST00000213114 Chac1Q8R3J5 223 aa7.42□□□□□ -1.22
Ldlr-202ENSMUST00000213114 Atp6v0bQ91V37 205 aa7.42□□□□□ -1.22
Ldlr-202ENSMUST00000213114 Iah1Q9DB29 249 aa7.42□□□□□ -1.22
Ldlr-202ENSMUST00000213114 Vps13aQ5H8C4 3166 aa7.42□□□□□ -1.22
Ldlr-202ENSMUST00000213114 Gm33815A0A087WNV3 176 aa7.41□□□□□ -1.22
Ldlr-202ENSMUST00000213114 Gm10188Q3V432 135 aa7.41□□□□□ -1.22
Ldlr-202ENSMUST00000213114 4930544G11RikQ9CR99 193 aa7.41□□□□□ -1.22
Ldlr-202ENSMUST00000213114 Card19Q9D1I2 183 aa7.41□□□□□ -1.22
Retrieved 100 of 22,080 RNA–protein pairs in 32.9 ms