RNA–Protein interactions for RNA: ENSMUST00000116492.2

Ubp1-203, Transcript of Upstream-binding protein 1, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Ubp1, Length 2,111 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1-203ENSMUST00000116492 Ighv1-62-3P01754 117 aa18.31■□□□□ 0.52
Ubp1-203ENSMUST00000116492 Cd24P24807 76 aa18.31■□□□□ 0.52
Ubp1-203ENSMUST00000116492 Q4KKZ1 196 aa18.31■□□□□ 0.52
Ubp1-203ENSMUST00000116492 Ufc1Q9CR09 167 aa18.31■□□□□ 0.52
Ubp1-203ENSMUST00000116492 Igkv4-71A0A0G2JEH0 117 aa18.3■□□□□ 0.52
Ubp1-203ENSMUST00000116492 Trav14-2A0A075B694 121 aa18.29■□□□□ 0.52
Ubp1-203ENSMUST00000116492 Ighv1-9A0A0A6YW37 117 aa18.29■□□□□ 0.52
Ubp1-203ENSMUST00000116492 Igkv20-101-2A0A0G2JDU3 113 aa18.29■□□□□ 0.52
Ubp1-203ENSMUST00000116492 Tctex1d4Q8CDY7 219 aa18.29■□□□□ 0.52
Ubp1-203ENSMUST00000116492 Col6a4A2AX52 2309 aa18.29■□□□□ 0.52
Ubp1-203ENSMUST00000116492 SonQ9QX47 2444 aaKnown RBP18.29■□□□□ 0.52
Ubp1-203ENSMUST00000116492 Ins1P01325 108 aa18.29■□□□□ 0.52
Ubp1-203ENSMUST00000116492 Trappc1Q5NCF2 145 aa18.29■□□□□ 0.52
Ubp1-203ENSMUST00000116492 Trdv2-1A0A0G2JGB9 116 aa18.28■□□□□ 0.52
Ubp1-203ENSMUST00000116492 P0C913 63 aa18.28■□□□□ 0.52
Ubp1-203ENSMUST00000116492 Cacng7P62956 275 aa18.28■□□□□ 0.52
Ubp1-203ENSMUST00000116492 Gm10226O88253 85 aa18.28■□□□□ 0.52
Ubp1-203ENSMUST00000116492 PlaurP35456 327 aa18.28■□□□□ 0.52
Ubp1-203ENSMUST00000116492 Gm5150Q1AN92 299 aa18.28■□□□□ 0.52
Ubp1-203ENSMUST00000116492 Ang5Q5GAN1 145 aa18.28■□□□□ 0.52
Ubp1-203ENSMUST00000116492 MycbQ6P8Z1 170 aa18.28■□□□□ 0.52
Ubp1-203ENSMUST00000116492 Gpx7Q99LJ6 186 aa18.27■□□□□ 0.52
Ubp1-203ENSMUST00000116492 Rchy1Q9CR50 261 aa18.27■□□□□ 0.52
Ubp1-203ENSMUST00000116492 Q9CX63 252 aa18.27■□□□□ 0.52
Ubp1-203ENSMUST00000116492 Trav6-4A0A075B6B4 115 aa18.26■□□□□ 0.51
Ubp1-203ENSMUST00000116492 Tmem136Q3TYE7 245 aa18.26■□□□□ 0.51
Ubp1-203ENSMUST00000116492 Gm10775Q3V290 127 aa18.26■□□□□ 0.51
Ubp1-203ENSMUST00000116492 Dido1Q8C9B9 2256 aaKnown RBP18.26■□□□□ 0.51
Ubp1-203ENSMUST00000116492 Ighv1-22A0A075B5U7 117 aa18.26■□□□□ 0.51
Ubp1-203ENSMUST00000116492 Ighv1-58A0A075B5W9 117 aa18.26■□□□□ 0.51
Ubp1-203ENSMUST00000116492 H2al2bA9Z055 111 aa18.26■□□□□ 0.51
Ubp1-203ENSMUST00000116492 AponG3X9D6 251 aa18.26■□□□□ 0.51
Ubp1-203ENSMUST00000116492 Plscr4P58196 326 aa18.26■□□□□ 0.51
Ubp1-203ENSMUST00000116492 Trav16d-dv11A0A075B617 117 aa18.25■□□□□ 0.51
Ubp1-203ENSMUST00000116492 Gm10521E9PZK0 135 aa18.25■□□□□ 0.51
Ubp1-203ENSMUST00000116492 P04219 140 aa18.25■□□□□ 0.51
Ubp1-203ENSMUST00000116492 Defb18Q30KP5 85 aa18.25■□□□□ 0.51
Ubp1-203ENSMUST00000116492 Pmis2Q497Q9 96 aa18.25■□□□□ 0.51
Ubp1-203ENSMUST00000116492 Il22ra1Q80XZ4 581 aa18.25■□□□□ 0.51
Ubp1-203ENSMUST00000116492 Shisa9Q9CZN4 424 aa18.25■□□□□ 0.51
Ubp1-203ENSMUST00000116492 Trav7-5A0A0G2JFX6 112 aa18.25■□□□□ 0.51
Ubp1-203ENSMUST00000116492 Gm765B2RVL9 189 aa18.25■□□□□ 0.51
Ubp1-203ENSMUST00000116492 Obox1Q9D350 204 aa18.25■□□□□ 0.51
Ubp1-203ENSMUST00000116492 PlnP61014 52 aa18.24■□□□□ 0.51
Ubp1-203ENSMUST00000116492 Ube2tQ9CQ37 204 aa18.24■□□□□ 0.51
Ubp1-203ENSMUST00000116492 Hspb8Q9JK92 196 aa18.24■□□□□ 0.51
Ubp1-203ENSMUST00000116492 Bri3P28662 125 aa18.23■□□□□ 0.51
Ubp1-203ENSMUST00000116492 Trav2Q5R1I9 109 aa18.23■□□□□ 0.51
Ubp1-203ENSMUST00000116492 TdhQ8K3F7 373 aa18.23■□□□□ 0.51
Ubp1-203ENSMUST00000116492 EsdQ9R0P3 282 aa18.23■□□□□ 0.51
Ubp1-203ENSMUST00000116492 Sptan1P16546 2472 aaKnown RBP18.23■□□□□ 0.51
Ubp1-203ENSMUST00000116492 Rpl11Q9CXW4 178 aaKnown RBP18.23■□□□□ 0.51
Ubp1-203ENSMUST00000116492 Defa35E9QLQ1 93 aa18.22■□□□□ 0.51
Ubp1-203ENSMUST00000116492 P01739 132 aa18.22■□□□□ 0.51
Ubp1-203ENSMUST00000116492 Olfr311Q5NC59 308 aa18.22■□□□□ 0.51
Ubp1-203ENSMUST00000116492 Spock3Q8BKV0 436 aa18.22■□□□□ 0.51
Ubp1-203ENSMUST00000116492 Olfr498Q8VEW2 330 aa18.22■□□□□ 0.51
Ubp1-203ENSMUST00000116492 OtorQ9JIE3 128 aa18.22■□□□□ 0.51
Ubp1-203ENSMUST00000116492 Gm12888Q3UW77 119 aa18.22■□□□□ 0.51
Ubp1-203ENSMUST00000116492 Tspo2Q9CRZ8 162 aa18.22■□□□□ 0.51
Ubp1-203ENSMUST00000116492 4930447F04RikA2AFR2 126 aa18.21■□□□□ 0.51
Ubp1-203ENSMUST00000116492 P01801 115 aa18.21■□□□□ 0.51
Ubp1-203ENSMUST00000116492 Defa-rs7P50715 91 aa18.21■□□□□ 0.51
Ubp1-203ENSMUST00000116492 Q3UNZ8 350 aa18.21■□□□□ 0.51
Ubp1-203ENSMUST00000116492 Rbfox3Q8BIF2 374 aa18.21■□□□□ 0.51
Ubp1-203ENSMUST00000116492 Tctex1d2Q9CQ66 144 aa18.21■□□□□ 0.51
Ubp1-203ENSMUST00000116492 Dkk2Q9QYZ8 259 aa18.21■□□□□ 0.51
Ubp1-203ENSMUST00000116492 Cdx4Q07424 282 aa18.2■□□□□ 0.5
Ubp1-203ENSMUST00000116492 Igkv4-69A0A0B4J1I6 116 aa18.2■□□□□ 0.5
Ubp1-203ENSMUST00000116492 Tmem238lA0A1B0GS74 79 aa18.2■□□□□ 0.5
Ubp1-203ENSMUST00000116492 Gng4P50153 75 aa18.2■□□□□ 0.5
Ubp1-203ENSMUST00000116492 Ep300B2RWS6 2412 aa18.2■□□□□ 0.5
Ubp1-203ENSMUST00000116492 Ly6g5bQ8K1T4 194 aa18.19■□□□□ 0.5
Ubp1-203ENSMUST00000116492 Klk10Q99M20 278 aa18.19■□□□□ 0.5
Ubp1-203ENSMUST00000116492 Krtap26-1Q9D7N2 215 aa18.19■□□□□ 0.5
Ubp1-203ENSMUST00000116492 Cnn3Q9DAW9 330 aaKnown RBP18.19■□□□□ 0.5
Ubp1-203ENSMUST00000116492 Sertad4A7DTG3 377 aa18.19■□□□□ 0.5
Ubp1-203ENSMUST00000116492 Smim15Q3UTD9 74 aa18.19■□□□□ 0.5
Ubp1-203ENSMUST00000116492 Ighv1-75A0A075B5Y2 117 aa18.18■□□□□ 0.5
Ubp1-203ENSMUST00000116492 Vsig4F6TUL9 280 aa18.18■□□□□ 0.5
Ubp1-203ENSMUST00000116492 P01750 117 aa18.18■□□□□ 0.5
Ubp1-203ENSMUST00000116492 P06330 118 aa18.18■□□□□ 0.5
Ubp1-203ENSMUST00000116492 Hnrnpa3Q8BG05 379 aaKnown RBP18.18■□□□□ 0.5
Ubp1-203ENSMUST00000116492 Tmem14cQ9CQN6 114 aa18.18■□□□□ 0.5
Ubp1-203ENSMUST00000116492 Ighv8-8A0A0A6YXQ0 119 aa18.17■□□□□ 0.5
Ubp1-203ENSMUST00000116492 Slc16a4Q8R0M8 500 aa18.17■□□□□ 0.5
Ubp1-203ENSMUST00000116492 Ndufc2Q9CQ54 120 aa18.17■□□□□ 0.5
Ubp1-203ENSMUST00000116492 Tmem262D3Z338 116 aa18.16■□□□□ 0.5
Ubp1-203ENSMUST00000116492 Esp3J3QN49 87 aa18.16■□□□□ 0.5
Ubp1-203ENSMUST00000116492 CrxO54751 299 aa18.16■□□□□ 0.5
Ubp1-203ENSMUST00000116492 Ca1P13634 261 aa18.16■□□□□ 0.5
Ubp1-203ENSMUST00000116492 Ammecr1lQ8JZZ6 310 aa18.16■□□□□ 0.5
Ubp1-203ENSMUST00000116492 Odf3Q920N1 254 aa18.16■□□□□ 0.5
Ubp1-203ENSMUST00000116492 NbasE9Q411 2356 aa18.16■□□□□ 0.5
Ubp1-203ENSMUST00000116492 Ighv3-3A0A0A6YWL2 116 aa18.16■□□□□ 0.5
Ubp1-203ENSMUST00000116492 Gm9961Q8BNV2 113 aa18.16■□□□□ 0.5
Ubp1-203ENSMUST00000116492 Gpr82Q8BZR0 328 aa18.16■□□□□ 0.5
Ubp1-203ENSMUST00000116492 TshbP12656 138 aa18.15■□□□□ 0.5
Ubp1-203ENSMUST00000116492 SstP60041 116 aa18.15■□□□□ 0.5
Ubp1-203ENSMUST00000116492 Rnf114Q9ET26 229 aa18.15■□□□□ 0.5
Retrieved 100 of 22,080 RNA–protein pairs in 86 ms