RNA–Protein interactions for RNA: ENSMUST00000098814.10

Lig1-201, Transcript of DNA ligase 1, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Lig1, Length 3,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig1-201ENSMUST00000098814 Rbfox3Q8BIF2 374 aa9.38□□□□□ -0.91
Lig1-201ENSMUST00000098814 Gm5105Q8C6Y9 112 aa9.38□□□□□ -0.91
Lig1-201ENSMUST00000098814 Ighv1-23A0A0A6YVW3 117 aa9.38□□□□□ -0.91
Lig1-201ENSMUST00000098814 Ccl6P27784 116 aa9.38□□□□□ -0.91
Lig1-201ENSMUST00000098814 Bsph2Q0Q236 131 aa9.38□□□□□ -0.91
Lig1-201ENSMUST00000098814 Khdc1aQ3UWR2 166 aa9.38□□□□□ -0.91
Lig1-201ENSMUST00000098814 Trav16d-dv11A0A075B617 117 aa9.37□□□□□ -0.91
Lig1-201ENSMUST00000098814 P01801 115 aa9.37□□□□□ -0.91
Lig1-201ENSMUST00000098814 Prok1Q14A28 105 aa9.37□□□□□ -0.91
Lig1-201ENSMUST00000098814 Aqp6Q8C4A0 293 aa9.37□□□□□ -0.91
Lig1-201ENSMUST00000098814 Dusp14Q9JLY7 198 aa9.37□□□□□ -0.91
Lig1-201ENSMUST00000098814 Nav2E9Q842 2432 aa9.37□□□□□ -0.91
Lig1-201ENSMUST00000098814 Smg1Q8BKX6 3658 aaKnown RBP9.37□□□□□ -0.91
Lig1-201ENSMUST00000098814 Igkv4-90A0A075B5L3 117 aa9.37□□□□□ -0.91
Lig1-201ENSMUST00000098814 Sertad4A7DTG3 377 aa9.37□□□□□ -0.91
Lig1-201ENSMUST00000098814 H2al2bA9Z055 111 aa9.37□□□□□ -0.91
Lig1-201ENSMUST00000098814 P06330 118 aa9.37□□□□□ -0.91
Lig1-201ENSMUST00000098814 Tcl1b4P56844 120 aa9.37□□□□□ -0.91
Lig1-201ENSMUST00000098814 Hspe1Q64433 102 aaKnown RBP9.37□□□□□ -0.91
Lig1-201ENSMUST00000098814 BB014433Q8C5R5 389 aa9.36□□□□□ -0.91
Lig1-201ENSMUST00000098814 Obox1Q9D350 204 aa9.36□□□□□ -0.91
Lig1-201ENSMUST00000098814 Igkv4-57A0A0A6YYE7 117 aa9.36□□□□□ -0.91
Lig1-201ENSMUST00000098814 Olfr1209Q3SXJ3 310 aa9.36□□□□□ -0.91
Lig1-201ENSMUST00000098814 Gm4763Q8CFJ5 196 aa9.36□□□□□ -0.91
Lig1-201ENSMUST00000098814 Bub3Q9WVA3 326 aa9.36□□□□□ -0.91
Lig1-201ENSMUST00000098814 CrebbpP45481 2441 aa9.35□□□□□ -0.91
Lig1-201ENSMUST00000098814 Odf3l1Q810P2 275 aa9.35□□□□□ -0.91
Lig1-201ENSMUST00000098814 Klk7Q91VE3 249 aa9.35□□□□□ -0.91
Lig1-201ENSMUST00000098814 Prr13Q9CQJ5 137 aa9.35□□□□□ -0.91
Lig1-201ENSMUST00000098814 Trav19A0A0B4J1K4 119 aa9.35□□□□□ -0.91
Lig1-201ENSMUST00000098814 Gm867A0A1W2P7T4 151 aa9.35□□□□□ -0.91
Lig1-201ENSMUST00000098814 Minos1Q7TNS2 76 aa9.35□□□□□ -0.91
Lig1-201ENSMUST00000098814 DspE9Q557 2883 aaKnown RBP9.35□□□□□ -0.91
Lig1-201ENSMUST00000098814 Gm11565A2A4M7 156 aa9.35□□□□□ -0.91
Lig1-201ENSMUST00000098814 Gm5878E9PUB3 99 aa9.35□□□□□ -0.91
Lig1-201ENSMUST00000098814 Ins1P01325 108 aa9.35□□□□□ -0.91
Lig1-201ENSMUST00000098814 Spink6Q8BT20 105 aa9.35□□□□□ -0.91
Lig1-201ENSMUST00000098814 Fam24aQ8CF27 98 aa9.35□□□□□ -0.91
Lig1-201ENSMUST00000098814 Odf3Q920N1 254 aa9.35□□□□□ -0.91
Lig1-201ENSMUST00000098814 Q9CX25 107 aa9.35□□□□□ -0.91
Lig1-201ENSMUST00000098814 Pla2g2dQ9WVF6 144 aa9.35□□□□□ -0.91
Lig1-201ENSMUST00000098814 Gm26938S4R185 226 aa9.35□□□□□ -0.91
Lig1-201ENSMUST00000098814 Ighv1-4A0A075B5T4 117 aa9.34□□□□□ -0.91
Lig1-201ENSMUST00000098814 Igkv4-59A0A0B4J1I8 117 aa9.34□□□□□ -0.91
Lig1-201ENSMUST00000098814 Defa34D3Z0J0 93 aa9.34□□□□□ -0.91
Lig1-201ENSMUST00000098814 Smlr1J3QMJ4 66 aa9.34□□□□□ -0.91
Lig1-201ENSMUST00000098814 Cox7cP17665 63 aa9.34□□□□□ -0.91
Lig1-201ENSMUST00000098814 Hes7Q8BKT2 225 aa9.34□□□□□ -0.91
Lig1-201ENSMUST00000098814 Gpx7Q99LJ6 186 aa9.34□□□□□ -0.91
Lig1-201ENSMUST00000098814 SetxA2AKX3 2646 aa9.34□□□□□ -0.91
Lig1-201ENSMUST00000098814 Ighv3-1A0A075B5S6 116 aa9.34□□□□□ -0.91
Lig1-201ENSMUST00000098814 Sap30O88574 220 aa9.34□□□□□ -0.91
Lig1-201ENSMUST00000098814 Zfand3Q497H0 227 aa9.34□□□□□ -0.91
Lig1-201ENSMUST00000098814 Try10Q792Z1 246 aaKnown RBP9.34□□□□□ -0.91
Lig1-201ENSMUST00000098814 Stpg1Q9D2F5 341 aa9.34□□□□□ -0.91
Lig1-201ENSMUST00000098814 Ighv1-53A0A075B5W3 117 aa9.33□□□□□ -0.92
Lig1-201ENSMUST00000098814 Igkv4-81A0A0G2JEY5 119 aa9.33□□□□□ -0.92
Lig1-201ENSMUST00000098814 Esp3J3QN49 87 aa9.33□□□□□ -0.92
Lig1-201ENSMUST00000098814 P01794 123 aa9.33□□□□□ -0.92
Lig1-201ENSMUST00000098814 TctaQ8VEA7 122 aa9.33□□□□□ -0.92
Lig1-201ENSMUST00000098814 Cryba4Q9JJV0 196 aa9.33□□□□□ -0.92
Lig1-201ENSMUST00000098814 Hbb-bsA8DUK4 147 aa9.33□□□□□ -0.92
Lig1-201ENSMUST00000098814 Hbb-b1P02088 147 aa9.33□□□□□ -0.92
Lig1-201ENSMUST00000098814 Lynx1P0DP60 116 aa9.33□□□□□ -0.92
Lig1-201ENSMUST00000098814 Srsf1Q6PDM2 248 aaKnown RBP9.33□□□□□ -0.92
Lig1-201ENSMUST00000098814 Trank1Q8BV79 2999 aa9.33□□□□□ -0.92
Lig1-201ENSMUST00000098814 A130051J06RikQ8CAU1 227 aa9.33□□□□□ -0.92
Lig1-201ENSMUST00000098814 Snai3Q9QY31 287 aa9.33□□□□□ -0.92
Lig1-201ENSMUST00000098814 Ndufa1O35683 70 aa9.33□□□□□ -0.92
Lig1-201ENSMUST00000098814 Prrc2aQ7TSC1 2158 aaKnown RBP9.32□□□□□ -0.92
Lig1-201ENSMUST00000098814 Fbn2Q61555 2907 aa9.32□□□□□ -0.92
Lig1-201ENSMUST00000098814 Trav21-dv12A0A075B6C4 109 aa9.32□□□□□ -0.92
Lig1-201ENSMUST00000098814 Gm29289A0A087WPY7 166 aa9.32□□□□□ -0.92
Lig1-201ENSMUST00000098814 Gm4064A0A087WR82 380 aa9.32□□□□□ -0.92
Lig1-201ENSMUST00000098814 Gm10352B2RWR6 380 aa9.32□□□□□ -0.92
Lig1-201ENSMUST00000098814 Smim20D3Z7Q2 69 aa9.32□□□□□ -0.92
Lig1-201ENSMUST00000098814 1700056E22RikF7CNM6 234 aa9.32□□□□□ -0.92
Lig1-201ENSMUST00000098814 Gm21693J3QK27 380 aa9.32□□□□□ -0.92
Lig1-201ENSMUST00000098814 Rbmy1a1O35698 380 aa9.32□□□□□ -0.92
Lig1-201ENSMUST00000098814 Tal2Q62282 108 aa9.32□□□□□ -0.92
Lig1-201ENSMUST00000098814 Tmem30bQ8BHG3 353 aa9.32□□□□□ -0.92
Lig1-201ENSMUST00000098814 ManfQ9CXI5 179 aaKnown RBP9.32□□□□□ -0.92
Lig1-201ENSMUST00000098814 Chac1Q8R3J5 223 aa9.32□□□□□ -0.92
Lig1-201ENSMUST00000098814 P06334 169 aa9.31□□□□□ -0.92
Lig1-201ENSMUST00000098814 Gm12888Q3UW77 119 aa9.31□□□□□ -0.92
Lig1-201ENSMUST00000098814 Psmb11Q8BG41 302 aa9.31□□□□□ -0.92
Lig1-201ENSMUST00000098814 Atp6v0e1Q9CQD8 81 aa9.31□□□□□ -0.92
Lig1-201ENSMUST00000098814 RhohQ9D3G9 191 aa9.31□□□□□ -0.92
Lig1-201ENSMUST00000098814 Rpl32P62911 135 aaKnown RBP9.31□□□□□ -0.92
Lig1-201ENSMUST00000098814 FshbQ60687 130 aa9.31□□□□□ -0.92
Lig1-201ENSMUST00000098814 Msrb2Q78J03 175 aa9.31□□□□□ -0.92
Lig1-201ENSMUST00000098814 Rpl24Q8BP67 157 aaKnown RBP9.31□□□□□ -0.92
Lig1-201ENSMUST00000098814 Il19Q8CJ70 176 aa9.3□□□□□ -0.92
Lig1-201ENSMUST00000098814 Parm1Q923D3 296 aa9.3□□□□□ -0.92
Lig1-201ENSMUST00000098814 Gm26920S4R2A5 56 aa9.3□□□□□ -0.92
Lig1-201ENSMUST00000098814 Prrc2cQ3TLH4 2846 aaKnown RBP9.3□□□□□ -0.92
Lig1-201ENSMUST00000098814 Ighv3-4A0A0A6YXF1 117 aa9.3□□□□□ -0.92
Lig1-201ENSMUST00000098814 Igkv4-71A0A0G2JEH0 117 aa9.3□□□□□ -0.92
Lig1-201ENSMUST00000098814 TcraP01849 138 aa9.3□□□□□ -0.92
Lig1-201ENSMUST00000098814 E130116L18RikQ8BMV6 101 aa9.3□□□□□ -0.92
Retrieved 100 of 22,080 RNA–protein pairs in 13.3 ms