RNA–Protein interactions for RNA: ENSMUST00000098814.10

Lig1-201, Transcript of DNA ligase 1, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Lig1, Length 3,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig1-201ENSMUST00000098814 Gm35339A0A140LHH9 1649 aa23.56■■□□□ 1.36
Lig1-201ENSMUST00000098814 NischQ80TM9 1593 aa23.07■■□□□ 1.28
Lig1-201ENSMUST00000098814 Abcc9P70170 1546 aa22.61■■□□□ 1.21
Lig1-201ENSMUST00000098814 Abcc8B2RUS7 1588 aa22.18■■□□□ 1.14
Lig1-201ENSMUST00000098814 Rtl1Q7M732 1744 aa21.46■■□□□ 1.03
Lig1-201ENSMUST00000098814 Rhox8Q6VSS7 320 aa21.28■■□□□ 1
Lig1-201ENSMUST00000098814 Ccdc180J3QNE4 1664 aa21.11■□□□□ 0.97
Lig1-201ENSMUST00000098814 Dcaf1Q80TR8 1506 aa21.06■□□□□ 0.96
Lig1-201ENSMUST00000098814 ScribQ80U72 1612 aa20.86■□□□□ 0.93
Lig1-201ENSMUST00000098814 Zcchc6Q5BLK4 1491 aaKnown RBP20.57■□□□□ 0.88
Lig1-201ENSMUST00000098814 Rpgrip1Q9EPQ2 1331 aa20.54■□□□□ 0.88
Lig1-201ENSMUST00000098814 NacadQ5SWP3 1504 aa20.33■□□□□ 0.85
Lig1-201ENSMUST00000098814 Kdm5dQ62240 1548 aa20.29■□□□□ 0.84
Lig1-201ENSMUST00000098814 Crybg2B7ZCC2 1516 aa20.18■□□□□ 0.82
Lig1-201ENSMUST00000098814 Rb1cc1Q9ESK9 1588 aa20.16■□□□□ 0.82
Lig1-201ENSMUST00000098814 Acin1Q9JIX8 1338 aaKnown RBP20.09■□□□□ 0.81
Lig1-201ENSMUST00000098814 Baz1aO88379 1555 aa20.08■□□□□ 0.8
Lig1-201ENSMUST00000098814 HrcG5E8J6 738 aa20.02■□□□□ 0.8
Lig1-201ENSMUST00000098814 Sycp2Q9CUU3 1500 aa19.89■□□□□ 0.78
Lig1-201ENSMUST00000098814 Ehmt2Q9Z148 1263 aaKnown RBP19.72■□□□□ 0.75
Lig1-201ENSMUST00000098814 Ccdc136Q3TVA9 1136 aa19.71■□□□□ 0.75
Lig1-201ENSMUST00000098814 Smarca2Q6DIC0 1577 aa19.63■□□□□ 0.73
Lig1-201ENSMUST00000098814 Trim41Q5NCC3 630 aa19.46■□□□□ 0.71
Lig1-201ENSMUST00000098814 BicraF8VPZ9 1578 aa19.43■□□□□ 0.7
Lig1-201ENSMUST00000098814 Pcgf6Q99NA9 353 aa19.42■□□□□ 0.7
Lig1-201ENSMUST00000098814 Cep164Q5DU05 1446 aa19.33■□□□□ 0.69
Lig1-201ENSMUST00000098814 Supt5hO55201 1082 aaKnown RBP19.01■□□□□ 0.63
Lig1-201ENSMUST00000098814 Rsf1E9PWW9 1441 aaKnown RBP18.95■□□□□ 0.62
Lig1-201ENSMUST00000098814 Brd4Q9ESU6 1400 aaKnown RBP18.93■□□□□ 0.62
Lig1-201ENSMUST00000098814 Smarca4Q3TKT4 1613 aaKnown RBP18.92■□□□□ 0.62
Lig1-201ENSMUST00000098814 Chic1Q8CBW7 227 aa18.89■□□□□ 0.61
Lig1-201ENSMUST00000098814 Cttnbp2B9EJA2 1648 aa18.87■□□□□ 0.61
Lig1-201ENSMUST00000098814 Cecr2E9Q2Z1 1453 aa18.83■□□□□ 0.61
Lig1-201ENSMUST00000098814 Cngb1E1AZ71 1325 aa18.82■□□□□ 0.6
Lig1-201ENSMUST00000098814 Ccdc88bQ4QRL3 1481 aa18.77■□□□□ 0.6
Lig1-201ENSMUST00000098814 Golga3P55937 1487 aa18.76■□□□□ 0.59
Lig1-201ENSMUST00000098814 Gab3Q8BSM5 595 aa18.76■□□□□ 0.59
Lig1-201ENSMUST00000098814 Synj1Q8CHC4 1574 aa18.75■□□□□ 0.59
Lig1-201ENSMUST00000098814 CftrP26361 1476 aa18.75■□□□□ 0.59
Lig1-201ENSMUST00000098814 NefmP08553 848 aa18.72■□□□□ 0.59
Lig1-201ENSMUST00000098814 Atad2bE9Q166 1460 aaKnown RBP18.7■□□□□ 0.58
Lig1-201ENSMUST00000098814 Pds5bQ4VA53 1446 aaKnown RBP18.68■□□□□ 0.58
Lig1-201ENSMUST00000098814 Top2bQ64511 1612 aa18.67■□□□□ 0.58
Lig1-201ENSMUST00000098814 Mier1Q5UAK0 511 aa18.65■□□□□ 0.58
Lig1-201ENSMUST00000098814 Neurod1Q60867 357 aa18.65■□□□□ 0.58
Lig1-201ENSMUST00000098814 Iqgap2Q3UQ44 1575 aa18.62■□□□□ 0.57
Lig1-201ENSMUST00000098814 Zeb1Q64318 1117 aa18.62■□□□□ 0.57
Lig1-201ENSMUST00000098814 Sall2Q9QX96 1004 aa18.46■□□□□ 0.55
Lig1-201ENSMUST00000098814 Wdr62Q3U3T8 1523 aa18.41■□□□□ 0.54
Lig1-201ENSMUST00000098814 Baz1bQ9Z277 1479 aa18.38■□□□□ 0.53
Lig1-201ENSMUST00000098814 Esf1Q3V1V3 845 aaKnown RBP18.37■□□□□ 0.53
Lig1-201ENSMUST00000098814 Thoc2B1AZI6 1594 aaKnown RBP18.36■□□□□ 0.53
Lig1-201ENSMUST00000098814 TnnQ80Z71 1560 aa18.35■□□□□ 0.53
Lig1-201ENSMUST00000098814 Cc2d2aQ8CFW7 1633 aa18.34■□□□□ 0.53
Lig1-201ENSMUST00000098814 Rapgef2Q8CHG7 1496 aa18.33■□□□□ 0.53
Lig1-201ENSMUST00000098814 Las1lA2BE28 776 aaKnown RBP18.31■□□□□ 0.52
Lig1-201ENSMUST00000098814 Frmpd1A2AKB4 1549 aa18.26■□□□□ 0.51
Lig1-201ENSMUST00000098814 Fmn1Q05860 1466 aa18.25■□□□□ 0.51
Lig1-201ENSMUST00000098814 Anks4bQ8K3X6 423 aa18.24■□□□□ 0.51
Lig1-201ENSMUST00000098814 UbtfP25976 765 aaKnown RBP18.22■□□□□ 0.51
Lig1-201ENSMUST00000098814 Unc13aQ4KUS2 1712 aa18.22■□□□□ 0.51
Lig1-201ENSMUST00000098814 Top2aQ01320 1528 aaKnown RBP18.21■□□□□ 0.51
Lig1-201ENSMUST00000098814 Ercc6F8VPZ5 1481 aa18.19■□□□□ 0.5
Lig1-201ENSMUST00000098814 Lamc3Q9R0B6 1581 aa18.19■□□□□ 0.5
Lig1-201ENSMUST00000098814 Aebp2Q9Z248 504 aaKnown RBP18.15■□□□□ 0.5
Lig1-201ENSMUST00000098814 Cep162Q6ZQ06 1403 aa18.15■□□□□ 0.5
Lig1-201ENSMUST00000098814 Fam135aQ6NS59 1506 aa18.14■□□□□ 0.49
Lig1-201ENSMUST00000098814 Wdr66E9Q743 1299 aa18.11■□□□□ 0.49
Lig1-201ENSMUST00000098814 ClspnQ80YR7 1315 aa18.09■□□□□ 0.49
Lig1-201ENSMUST00000098814 1700123L14RikQ3V2K7 440 aa18.04■□□□□ 0.48
Lig1-201ENSMUST00000098814 Csrnp3P59055 597 aa18.02■□□□□ 0.47
Lig1-201ENSMUST00000098814 Eif4g1Q6NZJ6 1600 aaKnown RBP18.01■□□□□ 0.47
Lig1-201ENSMUST00000098814 DiexfQ8BTT6 772 aaKnown RBP18.01■□□□□ 0.47
Lig1-201ENSMUST00000098814 Cdk11bP24788 784 aaKnown RBP18■□□□□ 0.47
Lig1-201ENSMUST00000098814 Myt1lP97500 1187 aa17.99■□□□□ 0.47
Lig1-201ENSMUST00000098814 Nop58Q6DFW4 536 aaKnown RBP17.97■□□□□ 0.47
Lig1-201ENSMUST00000098814 TonslQ6NZL6 1363 aa17.96■□□□□ 0.46
Lig1-201ENSMUST00000098814 Phldb1Q6PDH0 1371 aaKnown RBP17.92■□□□□ 0.46
Lig1-201ENSMUST00000098814 Ncapd3Q6ZQK0 1506 aa17.92■□□□□ 0.46
Lig1-201ENSMUST00000098814 Clip1Q922J3 1391 aa17.92■□□□□ 0.46
Lig1-201ENSMUST00000098814 Npm2Q80W85 207 aa17.87■□□□□ 0.45
Lig1-201ENSMUST00000098814 Myt1Q8CFC2 1127 aa17.85■□□□□ 0.45
Lig1-201ENSMUST00000098814 Aplp2Q06335 707 aa17.84■□□□□ 0.45
Lig1-201ENSMUST00000098814 Plekhg3Q4VAC9 1341 aa17.83■□□□□ 0.45
Lig1-201ENSMUST00000098814 Camsap1A2AHC3 1581 aa17.83■□□□□ 0.44
Lig1-201ENSMUST00000098814 Ppargc1bQ8VHJ7 1014 aa17.83■□□□□ 0.44
Lig1-201ENSMUST00000098814 NrkQ9R0G8 1455 aa17.78■□□□□ 0.44
Lig1-201ENSMUST00000098814 Arhgap35Q91YM2 1499 aa17.76■□□□□ 0.43
Lig1-201ENSMUST00000098814 Kdm5bQ80Y84 1544 aa17.71■□□□□ 0.43
Lig1-201ENSMUST00000098814 Arap1Q4LDD4 1452 aa17.7■□□□□ 0.42
Lig1-201ENSMUST00000098814 Gpatch8A2A6A1 1505 aa17.69■□□□□ 0.42
Lig1-201ENSMUST00000098814 CenpbP27790 599 aa17.68■□□□□ 0.42
Lig1-201ENSMUST00000098814 Eea1Q8BL66 1411 aa17.67■□□□□ 0.42
Lig1-201ENSMUST00000098814 Map3k1P53349 1493 aa17.67■□□□□ 0.42
Lig1-201ENSMUST00000098814 PtprkP35822 1457 aa17.66■□□□□ 0.42
Lig1-201ENSMUST00000098814 Arhgef5E9Q7D5 1581 aa17.66■□□□□ 0.42
Lig1-201ENSMUST00000098814 Ccdc18Q640L5 1455 aa17.64■□□□□ 0.41
Lig1-201ENSMUST00000098814 Grin2bQ01097 1482 aa17.62■□□□□ 0.41
Lig1-201ENSMUST00000098814 Shroom4Q1W617 1475 aa17.62■□□□□ 0.41
Lig1-201ENSMUST00000098814 Kif15Q6P9L6 1387 aa17.59■□□□□ 0.41
Retrieved 100 of 22,080 RNA–protein pairs in 39.1 ms