RNA–Protein interactions for RNA: ENSMUST00000098814.10

Lig1-201, Transcript of DNA ligase 1, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Lig1, Length 3,091 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig1-201ENSMUST00000098814 Gm35339A0A140LHH9 1649 aa23.56■■□□□ 1.36
Lig1-201ENSMUST00000098814 NischQ80TM9 1593 aa23.07■■□□□ 1.28
Lig1-201ENSMUST00000098814 Abcc9P70170 1546 aa22.61■■□□□ 1.21
Lig1-201ENSMUST00000098814 Abcc8B2RUS7 1588 aa22.18■■□□□ 1.14
Lig1-201ENSMUST00000098814 Rtl1Q7M732 1744 aa21.46■■□□□ 1.03
Lig1-201ENSMUST00000098814 Rhox8Q6VSS7 320 aa21.28■■□□□ 1
Lig1-201ENSMUST00000098814 Ccdc180J3QNE4 1664 aa21.11■□□□□ 0.97
Lig1-201ENSMUST00000098814 Dcaf1Q80TR8 1506 aa21.06■□□□□ 0.96
Lig1-201ENSMUST00000098814 ScribQ80U72 1612 aa20.86■□□□□ 0.93
Lig1-201ENSMUST00000098814 Zcchc6Q5BLK4 1491 aaKnown RBP20.57■□□□□ 0.88
Lig1-201ENSMUST00000098814 Rpgrip1Q9EPQ2 1331 aa20.54■□□□□ 0.88
Lig1-201ENSMUST00000098814 NacadQ5SWP3 1504 aa20.33■□□□□ 0.85
Lig1-201ENSMUST00000098814 Kdm5dQ62240 1548 aa20.29■□□□□ 0.84
Lig1-201ENSMUST00000098814 Crybg2B7ZCC2 1516 aa20.18■□□□□ 0.82
Lig1-201ENSMUST00000098814 Rb1cc1Q9ESK9 1588 aa20.16■□□□□ 0.82
Lig1-201ENSMUST00000098814 Acin1Q9JIX8 1338 aaKnown RBP20.09■□□□□ 0.81
Lig1-201ENSMUST00000098814 Baz1aO88379 1555 aa20.08■□□□□ 0.8
Lig1-201ENSMUST00000098814 HrcG5E8J6 738 aa20.02■□□□□ 0.8
Lig1-201ENSMUST00000098814 Sycp2Q9CUU3 1500 aa19.89■□□□□ 0.78
Lig1-201ENSMUST00000098814 Ehmt2Q9Z148 1263 aaKnown RBP19.72■□□□□ 0.75
Lig1-201ENSMUST00000098814 Ccdc136Q3TVA9 1136 aa19.71■□□□□ 0.75
Lig1-201ENSMUST00000098814 Smarca2Q6DIC0 1577 aa19.63■□□□□ 0.73
Lig1-201ENSMUST00000098814 Trim41Q5NCC3 630 aa19.46■□□□□ 0.71
Lig1-201ENSMUST00000098814 BicraF8VPZ9 1578 aa19.43■□□□□ 0.7
Lig1-201ENSMUST00000098814 Pcgf6Q99NA9 353 aa19.42■□□□□ 0.7
Lig1-201ENSMUST00000098814 Cep164Q5DU05 1446 aa19.33■□□□□ 0.69
Lig1-201ENSMUST00000098814 Supt5hO55201 1082 aaKnown RBP19.01■□□□□ 0.63
Lig1-201ENSMUST00000098814 Rsf1E9PWW9 1441 aaKnown RBP18.95■□□□□ 0.62
Lig1-201ENSMUST00000098814 Brd4Q9ESU6 1400 aaKnown RBP18.93■□□□□ 0.62
Lig1-201ENSMUST00000098814 Smarca4Q3TKT4 1613 aaKnown RBP18.92■□□□□ 0.62
Lig1-201ENSMUST00000098814 Chic1Q8CBW7 227 aa18.89■□□□□ 0.61
Lig1-201ENSMUST00000098814 Cttnbp2B9EJA2 1648 aa18.87■□□□□ 0.61
Lig1-201ENSMUST00000098814 Cecr2E9Q2Z1 1453 aa18.83■□□□□ 0.61
Lig1-201ENSMUST00000098814 Cngb1E1AZ71 1325 aa18.82■□□□□ 0.6
Lig1-201ENSMUST00000098814 Ccdc88bQ4QRL3 1481 aa18.77■□□□□ 0.6
Lig1-201ENSMUST00000098814 Golga3P55937 1487 aa18.76■□□□□ 0.59
Lig1-201ENSMUST00000098814 Gab3Q8BSM5 595 aa18.76■□□□□ 0.59
Lig1-201ENSMUST00000098814 Synj1Q8CHC4 1574 aa18.75■□□□□ 0.59
Lig1-201ENSMUST00000098814 CftrP26361 1476 aa18.75■□□□□ 0.59
Lig1-201ENSMUST00000098814 NefmP08553 848 aa18.72■□□□□ 0.59
Lig1-201ENSMUST00000098814 Atad2bE9Q166 1460 aaKnown RBP18.7■□□□□ 0.58
Lig1-201ENSMUST00000098814 Pds5bQ4VA53 1446 aaKnown RBP18.68■□□□□ 0.58
Lig1-201ENSMUST00000098814 Top2bQ64511 1612 aa18.67■□□□□ 0.58
Lig1-201ENSMUST00000098814 Mier1Q5UAK0 511 aa18.65■□□□□ 0.58
Lig1-201ENSMUST00000098814 Neurod1Q60867 357 aa18.65■□□□□ 0.58
Lig1-201ENSMUST00000098814 Iqgap2Q3UQ44 1575 aa18.62■□□□□ 0.57
Lig1-201ENSMUST00000098814 Zeb1Q64318 1117 aa18.62■□□□□ 0.57
Lig1-201ENSMUST00000098814 Sall2Q9QX96 1004 aa18.46■□□□□ 0.55
Lig1-201ENSMUST00000098814 Wdr62Q3U3T8 1523 aa18.41■□□□□ 0.54
Lig1-201ENSMUST00000098814 Baz1bQ9Z277 1479 aa18.38■□□□□ 0.53
Lig1-201ENSMUST00000098814 Esf1Q3V1V3 845 aaKnown RBP18.37■□□□□ 0.53
Lig1-201ENSMUST00000098814 Thoc2B1AZI6 1594 aaKnown RBP18.36■□□□□ 0.53
Lig1-201ENSMUST00000098814 TnnQ80Z71 1560 aa18.35■□□□□ 0.53
Lig1-201ENSMUST00000098814 Cc2d2aQ8CFW7 1633 aa18.34■□□□□ 0.53
Lig1-201ENSMUST00000098814 Rapgef2Q8CHG7 1496 aa18.33■□□□□ 0.53
Lig1-201ENSMUST00000098814 Las1lA2BE28 776 aaKnown RBP18.31■□□□□ 0.52
Lig1-201ENSMUST00000098814 Frmpd1A2AKB4 1549 aa18.26■□□□□ 0.51
Lig1-201ENSMUST00000098814 Fmn1Q05860 1466 aa18.25■□□□□ 0.51
Lig1-201ENSMUST00000098814 Anks4bQ8K3X6 423 aa18.24■□□□□ 0.51
Lig1-201ENSMUST00000098814 UbtfP25976 765 aaKnown RBP18.22■□□□□ 0.51
Lig1-201ENSMUST00000098814 Unc13aQ4KUS2 1712 aa18.22■□□□□ 0.51
Lig1-201ENSMUST00000098814 Top2aQ01320 1528 aaKnown RBP18.21■□□□□ 0.51
Lig1-201ENSMUST00000098814 Ercc6F8VPZ5 1481 aa18.19■□□□□ 0.5
Lig1-201ENSMUST00000098814 Lamc3Q9R0B6 1581 aa18.19■□□□□ 0.5
Lig1-201ENSMUST00000098814 Aebp2Q9Z248 504 aaKnown RBP18.15■□□□□ 0.5
Lig1-201ENSMUST00000098814 Cep162Q6ZQ06 1403 aa18.15■□□□□ 0.5
Lig1-201ENSMUST00000098814 Fam135aQ6NS59 1506 aa18.14■□□□□ 0.49
Lig1-201ENSMUST00000098814 Wdr66E9Q743 1299 aa18.11■□□□□ 0.49
Lig1-201ENSMUST00000098814 ClspnQ80YR7 1315 aa18.09■□□□□ 0.49
Lig1-201ENSMUST00000098814 1700123L14RikQ3V2K7 440 aa18.04■□□□□ 0.48
Lig1-201ENSMUST00000098814 Csrnp3P59055 597 aa18.02■□□□□ 0.47
Lig1-201ENSMUST00000098814 Eif4g1Q6NZJ6 1600 aaKnown RBP18.01■□□□□ 0.47
Lig1-201ENSMUST00000098814 DiexfQ8BTT6 772 aaKnown RBP18.01■□□□□ 0.47
Lig1-201ENSMUST00000098814 Cdk11bP24788 784 aaKnown RBP18■□□□□ 0.47
Lig1-201ENSMUST00000098814 Myt1lP97500 1187 aa17.99■□□□□ 0.47
Lig1-201ENSMUST00000098814 Nop58Q6DFW4 536 aaKnown RBP17.97■□□□□ 0.47
Lig1-201ENSMUST00000098814 TonslQ6NZL6 1363 aa17.96■□□□□ 0.46
Lig1-201ENSMUST00000098814 Phldb1Q6PDH0 1371 aaKnown RBP17.92■□□□□ 0.46
Lig1-201ENSMUST00000098814 Ncapd3Q6ZQK0 1506 aa17.92■□□□□ 0.46
Lig1-201ENSMUST00000098814 Clip1Q922J3 1391 aa17.92■□□□□ 0.46
Lig1-201ENSMUST00000098814 Npm2Q80W85 207 aa17.87■□□□□ 0.45
Lig1-201ENSMUST00000098814 Myt1Q8CFC2 1127 aa17.85■□□□□ 0.45
Lig1-201ENSMUST00000098814 Aplp2Q06335 707 aa17.84■□□□□ 0.45
Lig1-201ENSMUST00000098814 Plekhg3Q4VAC9 1341 aa17.83■□□□□ 0.45
Lig1-201ENSMUST00000098814 Camsap1A2AHC3 1581 aa17.83■□□□□ 0.44
Lig1-201ENSMUST00000098814 Ppargc1bQ8VHJ7 1014 aa17.83■□□□□ 0.44
Lig1-201ENSMUST00000098814 NrkQ9R0G8 1455 aa17.78■□□□□ 0.44
Lig1-201ENSMUST00000098814 Arhgap35Q91YM2 1499 aa17.76■□□□□ 0.43
Lig1-201ENSMUST00000098814 Kdm5bQ80Y84 1544 aa17.71■□□□□ 0.43
Lig1-201ENSMUST00000098814 Arap1Q4LDD4 1452 aa17.7■□□□□ 0.42
Lig1-201ENSMUST00000098814 Gpatch8A2A6A1 1505 aa17.69■□□□□ 0.42
Lig1-201ENSMUST00000098814 CenpbP27790 599 aa17.68■□□□□ 0.42
Lig1-201ENSMUST00000098814 Eea1Q8BL66 1411 aa17.67■□□□□ 0.42
Lig1-201ENSMUST00000098814 Map3k1P53349 1493 aa17.67■□□□□ 0.42
Lig1-201ENSMUST00000098814 PtprkP35822 1457 aa17.66■□□□□ 0.42
Lig1-201ENSMUST00000098814 Arhgef5E9Q7D5 1581 aa17.66■□□□□ 0.42
Lig1-201ENSMUST00000098814 Ccdc18Q640L5 1455 aa17.64■□□□□ 0.41
Lig1-201ENSMUST00000098814 Grin2bQ01097 1482 aa17.62■□□□□ 0.41
Lig1-201ENSMUST00000098814 Shroom4Q1W617 1475 aa17.62■□□□□ 0.41
Lig1-201ENSMUST00000098814 Kif15Q6P9L6 1387 aa17.59■□□□□ 0.41
Retrieved 100 of 22,080 RNA–protein pairs in 36.3 ms