RNA–Protein interactions for RNA: ENSMUST00000061628.6

Pcdh20-201, Transcript of Protocadherin-20, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh20, Length 5,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20-201ENSMUST00000061628 P01896 185 aa11.71□□□□□ -0.54
Pcdh20-201ENSMUST00000061628 Atg2aQ6P4T0 1914 aa11.7□□□□□ -0.54
Pcdh20-201ENSMUST00000061628 Armcx4E9PWM3 2356 aa11.7□□□□□ -0.54
Pcdh20-201ENSMUST00000061628 Mpv17l2Q8VIK2 200 aa11.7□□□□□ -0.54
Pcdh20-201ENSMUST00000061628 Cfap46E9Q2C0 2641 aa11.7□□□□□ -0.54
Pcdh20-201ENSMUST00000061628 PtprdQ64487 1912 aa11.7□□□□□ -0.54
Pcdh20-201ENSMUST00000061628 Gm5129F6YHA9 99 aa11.7□□□□□ -0.54
Pcdh20-201ENSMUST00000061628 P04940 107 aa11.7□□□□□ -0.54
Pcdh20-201ENSMUST00000061628 P04941 107 aa11.7□□□□□ -0.54
Pcdh20-201ENSMUST00000061628 F930015N05RikQ8C3A3 210 aa11.7□□□□□ -0.54
Pcdh20-201ENSMUST00000061628 Insl3O09107 122 aa11.7□□□□□ -0.54
Pcdh20-201ENSMUST00000061628 3110021N24RikJ3QMN2 152 aa11.7□□□□□ -0.54
Pcdh20-201ENSMUST00000061628 MsmbO08540 113 aa11.7□□□□□ -0.54
Pcdh20-201ENSMUST00000061628 Tusc5Q8C838 173 aa11.7□□□□□ -0.54
Pcdh20-201ENSMUST00000061628 Igkv4-53A0A0G2JFC6 119 aa11.69□□□□□ -0.54
Pcdh20-201ENSMUST00000061628 Prr3Q811B5 190 aaKnown RBP11.69□□□□□ -0.54
Pcdh20-201ENSMUST00000061628 Synj2bpQ9D6K5 145 aa11.69□□□□□ -0.54
Pcdh20-201ENSMUST00000061628 Smim10l1A0A087WNQ7 89 aa11.69□□□□□ -0.54
Pcdh20-201ENSMUST00000061628 Ighv1-74A0A0G2JGK2 117 aa11.69□□□□□ -0.54
Pcdh20-201ENSMUST00000061628 Zcwpw2Q08EN7 125 aa11.69□□□□□ -0.54
Pcdh20-201ENSMUST00000061628 Shisa9Q9CZN4 424 aa11.69□□□□□ -0.54
Pcdh20-201ENSMUST00000061628 Rasl10aQ8K5A4 203 aa11.69□□□□□ -0.54
Pcdh20-201ENSMUST00000061628 Gm19410A0A140LJC7 2098 aa11.69□□□□□ -0.54
Pcdh20-201ENSMUST00000061628 Trav14d-1A0A075B6B1 121 aa11.69□□□□□ -0.54
Pcdh20-201ENSMUST00000061628 Cysrt1Q9D1E4 142 aa11.68□□□□□ -0.54
Pcdh20-201ENSMUST00000061628 Tnrc6aQ3UHK8 1896 aaKnown RBP11.68□□□□□ -0.54
Pcdh20-201ENSMUST00000061628 Mtatp8P03930 67 aa11.68□□□□□ -0.54
Pcdh20-201ENSMUST00000061628 CrygbP04344 175 aa11.68□□□□□ -0.54
Pcdh20-201ENSMUST00000061628 Ca1P13634 261 aa11.68□□□□□ -0.54
Pcdh20-201ENSMUST00000061628 Q08AU9 97 aa11.68□□□□□ -0.54
Pcdh20-201ENSMUST00000061628 Olfr312Q7TRZ9 308 aa11.68□□□□□ -0.54
Pcdh20-201ENSMUST00000061628 Ccl21aP84444 133 aa11.68□□□□□ -0.54
Pcdh20-201ENSMUST00000061628 Ccl21bP86792 133 aa11.68□□□□□ -0.54
Pcdh20-201ENSMUST00000061628 Ccl21cP86793 133 aa11.68□□□□□ -0.54
Pcdh20-201ENSMUST00000061628 Morn5Q9DAI9 170 aa11.68□□□□□ -0.54
Pcdh20-201ENSMUST00000061628 Fam208bQ5DTT3 2382 aa11.68□□□□□ -0.54
Pcdh20-201ENSMUST00000061628 Cnot1Q6ZQ08 2375 aaKnown RBP11.68□□□□□ -0.54
Pcdh20-201ENSMUST00000061628 Trav12-3A0A075B648 115 aa11.68□□□□□ -0.54
Pcdh20-201ENSMUST00000061628 Prok1Q14A28 105 aa11.68□□□□□ -0.54
Pcdh20-201ENSMUST00000061628 Zfp407G3UVV3 2246 aa11.68□□□□□ -0.54
Pcdh20-201ENSMUST00000061628 Dock7Q8R1A4 2130 aaKnown RBP11.67□□□□□ -0.54
Pcdh20-201ENSMUST00000061628 MrapQ9D159 127 aa11.67□□□□□ -0.54
Pcdh20-201ENSMUST00000061628 Lyg1Q9D7Q0 197 aa11.67□□□□□ -0.54
Pcdh20-201ENSMUST00000061628 Ubl5Q9EPV8 73 aa11.67□□□□□ -0.54
Pcdh20-201ENSMUST00000061628 Crlf1Q9JM58 425 aa11.67□□□□□ -0.54
Pcdh20-201ENSMUST00000061628 Igkv8-34A0A0G2JDU0 121 aa11.67□□□□□ -0.54
Pcdh20-201ENSMUST00000061628 Cacna1eQ61290 2272 aa11.67□□□□□ -0.54
Pcdh20-201ENSMUST00000061628 Sslp1Q3UN54 99 aa11.67□□□□□ -0.54
Pcdh20-201ENSMUST00000061628 Igkv4-68A0A0B4J1I7 117 aa11.67□□□□□ -0.54
Pcdh20-201ENSMUST00000061628 Lyrm9Q3UN90 78 aa11.67□□□□□ -0.54
Pcdh20-201ENSMUST00000061628 Pet100P0DJE0 76 aa11.66□□□□□ -0.54
Pcdh20-201ENSMUST00000061628 Ang5Q5GAN1 145 aa11.66□□□□□ -0.54
Pcdh20-201ENSMUST00000061628 Il22ra2Q80XF5 230 aa11.66□□□□□ -0.54
Pcdh20-201ENSMUST00000061628 Tnfrsf13bQ9ET35 249 aa11.66□□□□□ -0.54
Pcdh20-201ENSMUST00000061628 Dennd4aE9Q8V6 1869 aa11.66□□□□□ -0.54
Pcdh20-201ENSMUST00000061628 Qrich2A0A140LIY9 2337 aa11.66□□□□□ -0.54
Pcdh20-201ENSMUST00000061628 GfyJ3KML8 504 aa11.66□□□□□ -0.54
Pcdh20-201ENSMUST00000061628 P04942 107 aa11.66□□□□□ -0.54
Pcdh20-201ENSMUST00000061628 Plxna2P70207 1894 aa11.66□□□□□ -0.54
Pcdh20-201ENSMUST00000061628 Dand5Q76LW6 185 aa11.66□□□□□ -0.54
Pcdh20-201ENSMUST00000061628 CtsbP10605 339 aa11.65□□□□□ -0.54
Pcdh20-201ENSMUST00000061628 Ighv1-4A0A075B5T4 117 aa11.65□□□□□ -0.54
Pcdh20-201ENSMUST00000061628 Zc2hc1aQ8BJH1 324 aa11.65□□□□□ -0.54
Pcdh20-201ENSMUST00000061628 A530064D06RikQ8BNV8 229 aa11.65□□□□□ -0.54
Pcdh20-201ENSMUST00000061628 Tmem210Q9D2F0 147 aa11.65□□□□□ -0.54
Pcdh20-201ENSMUST00000061628 Reg3dQ9QUS9 175 aa11.65□□□□□ -0.54
Pcdh20-201ENSMUST00000061628 Abca1P41233 2261 aa11.65□□□□□ -0.54
Pcdh20-201ENSMUST00000061628 Sptbn1Q62261 2363 aaKnown RBP11.65□□□□□ -0.54
Pcdh20-201ENSMUST00000061628 Inafm2A0A1L1STD6 152 aa11.65□□□□□ -0.54
Pcdh20-201ENSMUST00000061628 Reg3gO09049 174 aa11.65□□□□□ -0.54
Pcdh20-201ENSMUST00000061628 Myo9bQ9QY06 2114 aa11.65□□□□□ -0.54
Pcdh20-201ENSMUST00000061628 RlfA2A7F4 1918 aa11.65□□□□□ -0.54
Pcdh20-201ENSMUST00000061628 Ighv1-50A0A075B5W1 117 aa11.65□□□□□ -0.54
Pcdh20-201ENSMUST00000061628 Wnk2Q3UH66 2149 aa11.65□□□□□ -0.54
Pcdh20-201ENSMUST00000061628 Cd99Q8VCN6 175 aa11.65□□□□□ -0.54
Pcdh20-201ENSMUST00000061628 Ighv8-4A0A0A6YW26 117 aa11.64□□□□□ -0.55
Pcdh20-201ENSMUST00000061628 PtprfA2A8L5 1898 aa11.64□□□□□ -0.55
Pcdh20-201ENSMUST00000061628 Gm17677B3GLJ5 116 aa11.64□□□□□ -0.55
Pcdh20-201ENSMUST00000061628 Fam240bJ3QMB3 78 aa11.64□□□□□ -0.55
Pcdh20-201ENSMUST00000061628 Rpl32P62911 135 aaKnown RBP11.64□□□□□ -0.55
Pcdh20-201ENSMUST00000061628 Olfr313Q5NC55 308 aa11.64□□□□□ -0.55
Pcdh20-201ENSMUST00000061628 Trav14d-3-dv8A0A075B619 120 aa11.64□□□□□ -0.55
Pcdh20-201ENSMUST00000061628 Ccl25O35903 144 aa11.64□□□□□ -0.55
Pcdh20-201ENSMUST00000061628 Spry4Q9WTP2 300 aa11.64□□□□□ -0.55
Pcdh20-201ENSMUST00000061628 Frem1Q684R7 2191 aa11.64□□□□□ -0.55
Pcdh20-201ENSMUST00000061628 Ank3G5E8K5 1961 aa11.64□□□□□ -0.55
Pcdh20-201ENSMUST00000061628 P01793 123 aa11.63□□□□□ -0.55
Pcdh20-201ENSMUST00000061628 Mustn1Q99JI1 82 aa11.63□□□□□ -0.55
Pcdh20-201ENSMUST00000061628 Slc25a29Q8BL03 306 aa11.63□□□□□ -0.55
Pcdh20-201ENSMUST00000061628 Gm26558Q8BLW8 286 aa11.63□□□□□ -0.55
Pcdh20-201ENSMUST00000061628 Igkv4-81A0A0G2JEY5 119 aa11.63□□□□□ -0.55
Pcdh20-201ENSMUST00000061628 Gm15217A2CG07 155 aa11.63□□□□□ -0.55
Pcdh20-201ENSMUST00000061628 CtsgP28293 261 aa11.63□□□□□ -0.55
Pcdh20-201ENSMUST00000061628 SelenokQ9JLJ1 94 aa11.63□□□□□ -0.55
Pcdh20-201ENSMUST00000061628 Hoxd3P09027 433 aa11.63□□□□□ -0.55
Pcdh20-201ENSMUST00000061628 Prdm6Q3UZD5 596 aa11.63□□□□□ -0.55
Pcdh20-201ENSMUST00000061628 Gm9961Q8BNV2 113 aa11.63□□□□□ -0.55
Pcdh20-201ENSMUST00000061628 Tmem263Q9DAM7 115 aa11.63□□□□□ -0.55
Pcdh20-201ENSMUST00000061628 Trav6n-6A0A075B6B2 114 aa11.62□□□□□ -0.55
Pcdh20-201ENSMUST00000061628 Igkv4-59A0A0B4J1I8 117 aa11.62□□□□□ -0.55
Retrieved 100 of 22,080 RNA–protein pairs in 45.9 ms